CsaV3_5G013180 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G013180
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionribosomal RNA-processing protein 7 homolog A
Locationchr5: 9590622 .. 9596384 (-)
RNA-Seq ExpressionCsaV3_5G013180
SyntenyCsaV3_5G013180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCGTTCTAACTTGAAAGAAAAAGAAAAAAAAAAAGAAGAAATTGGAAAACCCTAAACCCTTTCTTACTTTTCTTCTGACGTACGTGCTCGGTTCTTCACTCTTTCTTCTTCTTCTCCACGATTTCTCCTCCGTTTCAGCATCTCAGTGACGCCGCCATTGCGCCGTTGTTTGTATTCATTTTTCCGTCGCAGCTTCTCTCCTAGCAGGTGTGGACTGATTTTTCTTTTCTTTTTTGGTACTGGTATTCTCCCAATCTCCATCTATATAATTACACAGATTAGAACTTATCTAACGAAAGGAAAGAGCAGTTGATATTGTTTTATTCAAACAATAGCTACGAACAAAAAAAAGGATAACCAGCCTAGCGGCAAATTGGGACTTCCCGAACTGCTGCGTGCTACTCTCTATTATTTAAATAATTACTTTTGCTTGTCGATTTAGGCGTTCATAATCTCTATATCTCATTGGTCTCTGCTGAAAATTGCGTTCTTCTAGTCTCCTAAACCTACTAAGCACCTCCCGCCATGAATTTTCCACCACCACCCTTTTGTATACCATTTTCCCTGATAAAAAGTCACAAATTTTAGAACTAAAAGTGTATTTCCAAGTCACAGCATCGATGTTTTTATTTTTAAATAATAAATAATAAATAAATAATTTGTTCCTTGGTCACTTCTGGCGCAGAGTGAGGACAGACGGATGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACATTGAGCCTGCGGTTGTAAAGGGTTTGTTTCTGCTTGCTACCTTGTTTACTATTTCTTTTGAGTTGAACAATATATGAAGTAGACCACTTGGTCAAGAATAGATTTACCAGTTGAGCTACATTATTGCTTATTTTTACATTACTCCTTCAGTTATCTTGAAATGGACTAGAACAGAAGTTATAGAACACCTTCTTATGGACTCAATTACAATTTTTAACTTAGGAAGGTGTTTGGTCCAAAGAGTCGGGTGAATAGGAGTTGAGGGGAGTGAATTGTCAACTCCTCTCCTTGTTTGGCCCTAGGAGTTTGTGGGTACCATTAGTAAAATAACACATAGAATTTGTACCTTGTTACTCTTTAGAATGTGGGCTTTAGAAGTTCACAACTTTCCAAACTCCATAACTTCTTCGAGTTCACAATTCCACTACTTGGATCAAATCACGCCCCATTAAGTATTTCTTCCTTCCGAGTGTCATAATTATTCCTCTTCTAGTATTTATCCCAATCGTTGATGGGTGGACGTTCGCCAAGACATGTAATCATATTTCATTACGAAGCTTTTTATCATTTTAAGAAAGAATGCCATCCTTGTTTGTCTTTTCCCGAATCTACGTGATATATGACTGAGTTCCAGTGGCTGATCAGACAACGCATCTTAAAACCCAGCCTGATGGTGCTCAGGATTTTGACAGTCTTGTAGCTCCATTCTTGCCCTTGTCGTTATTTTGGAAGAATCTCCTTTCTGGTTCTTGAACTAGCTCAGAGATGGCATCAATGAACCAACTCAACTGGGGTCTCTTGCTTGAAGAATTTCTTTCTAAATCTACGTCTTCAATTACAAAAAAGTTCATTTTCGTGCCACAGTAAAAGAACTCGACTACTTTACAGCTCTCTATTTCCATGTCAGAATTGGGTCTGGTTGAAAGGCTTGCTTAGAAGATTCACTGAAAAAGAAGCTCAGAAGGATGGTGGAAGGGCGGGGAGGTGAGGAGAGGAGAGGAGAGAAATAAGGGAGAGAGAACCTACCTTTGGACCAAGAAAAACTTCTTACCCCCTTCTTTCAAGGGGTGTTGCAACATTTCTGTTATGTTTTGCTCTCAGAGTGGGAACTAAACTGGTGAGGGAGAAAGTAGTCTTACTCTTCTCTACTTTTTTTCACTACATGCTCCTTTGTGGAAGAATGGAAGCTATATAATGGTGTCCCATTTTGGATGAGGATTTAAGAAAGTCTAGAGGCCCTTTTCATATTGGAACTTGGAAGAGAATAGGAAGTTGATTTTTAGTTTTGAGGGTAATAAAGTTTGTGCACTTTTACAACTTTGCTTTGATATTTGTGTAGGAAAATTCAGCAATTTGATAAAGTAGAGTTGGATAATGTGTGTAGTGTGTTTTATGAGTGGTCTTTTTATTTAAGAATGTGAGCTTCGATTGAGAAATACTGTTCATGCAAATGCTTACAGAAAAATATTTAACAAAGGGTGTTTAAGGGAACTATAGAAAGCGACCCCAATAAAAAAGAATGACCGCTAACTAATAATCACAAGGTTATCCTAAATAGTTGAATACAAAAGGATGATAAAGGACAATATATAATACACTTATACTAATATCAGCAGAGTAGCAGGGATATTGTTAGATTGGTTGAATGCCTCTTTGTGTGTGTCTTTCTCTTGGATTTTATGGTCTTGTTCTTTCAAATTGGAGTTTGTTTGTAAGGTAGTGTTTGGACATCTCCTGTAGGGTTGAGTTTTTCTCCCCGCTTTTTCAAATAATTAAAAACATGCGGTTATGTAAAAGTTCACTTTCAAAGAGAAAAGTTAGTCAAGAAGATGTCTTATTTTCCCTTGGGGGATTTTGGTGTTACATTTTGTGTACTAGTGCTTTTGAGGATATTCTCAAGACATCGCTGTCCTGAGTGACATTGTTTAGTGCATCTTCAAGACTAGGGAATTTTTGGGTGTTCACATTCTTGTTTCCCTATGCAACATTTTCCATGAAATGAATTAGCAAAGTTATTGAAGGGATGAGCCTGGGATAAGTTCTTTGTGTCTCTTTGATAATGTATTCAAGGAGTTATTTAATTATTCTGTTTTATTATCCCTTCCTTTTATTTATTTTTACGTTTCTTTTTTTGAGTTAGCTTCTTGTGTATGTAGCTCCTTGTTTTAAGTCTCTTTAATAATTTATTTTCATATTGCCCTTTTGTTCTCAATTTTTGCTTGCTTGTAAAGTATTTCTGCCCTATCTCTTCATTATTTTCTTTCCCTAGATTTTTCCCTATCATATAACTTATTAACTTGCATCCTGCTATGTAAGGCTTAACTGTAGTCAATGCAGATTCTGATCAGTTCGGTGTGGAGGGAGAAGATGCTGAAAAGCCCAAGAAGTCTGGTACTTAAAACTGCCTCAACCTCTCTTGCGGCTTGGTTAATGTTACTGTTGCTGTACACAATAACTTGGGAGTCTATGGAGACATAACTGGTAATATTCTTTGCAGATAAACTGAAGAAAGACAGGAAAAATAAAAAGAACCGAAAATCCTCTAATGATTGTGACAACTCGTTAGAAAATGGAAGAGCTATGCAGCTGGAAGCTTGTCAGCCCTTTGAGAATGGTGCATTCTTGAAAGGTATAAAAAAATATGAATGGATTTTAACTGATGCATGTTCAACTACTAGAAAGTTTCTCTTGAACTGACTTACAAGCAGAAAATTTTTCTTGTAGGTAAGGCCAAGAAATCTTCCAAAAAGAAAAGAAAGGACTCTAGTTCTCTAGATGCCAAAGGATCGACAGAATTACATGAAGATATTGATGAAAATGATGTCTATCAAATCTCTTCTGGAGATGATGACTCTTCAAAGGGAATGAAAAGTAAGAATTACGGGCATAAGATATCATTTTATATCAATGCTGCTCAGTCTTCCTGCTTAATGTCAAAATTTGTGCTTGTTCTTTCTTCTTACTGCCACATTTGTAATAGCCCTACCTCTCCTGTTGCTTGGAAATGAACCTTCTGAGTTCTCTTTTACTTTTGCTGAATCATTTTACTTGAAGCATTGGCGTGTGTGTGTTATGTTTTTAGGGAGCTTGTATCATATTGTGTTGGATTTTGTAAATTTCACATTCTGAACTTTATTATCTACAGGATGGATTACAGAATATCACAAAAGTAGACCGGGCTTGAATGTACTGCAACAGCGAATAGATGATTATATAACTGCACATGAGGCACAGCTAGAACAGGTAATATGCCCACTTGAACAGTGACAACTTAACTTTATCCCGTGCATTCTCATTCATTATGATGAAGCCTCTGAAACTGATTTCATGAGTTTTGATTATGTGTTTGAGAGCTATATTTCCTTTTAGGATGAAATGTACCAAAATAACTTAAAAGATGTTGAACGGTTGAGTTGAGGGTTACTTAGGGCTTGTTTACGTCGATGGAAGAAAAAAAATTGTTTTTCGAAGAGTCATTTTCATTTAAATTCTTATGATAACGAACTGTTTGAAATAAACTCTTTTCAAAAACTATTTTGAGTGGTTGCCAACATTCAAATATTTTCTAAAATGACTTATTTTCAAAATTAAATCCTTGAAAACTTAACCCAAGCACACCCACCCTTAACAATCGATTATTTGCAACAATATGTTTTACTTGTTTTTACCGATATCGGATTGGTTTGCCAGATGATCATAGTTCATAGACATTGAATCCTGTATCAGATGTGTGTGGTTAGCCTTGTGAATTAAGCTCTCATTTTGTTGACACAGGAAAAGAAGGAAAGGGAAGCTCAAGCTGCTGAAGGAGGATGGACAGTGGTTGTACATCAGAAGGGGAGGAAGAAGACCACAGATGCTGAAAGTGGGGTTACTGTGGGTTCAGTAGCGCAAAATTCTTTAGGGGATAAAATGTCCAAAAAGAAGAAGAATGAAGTTGGGTTGGATTTCTATCGATTTCAAAGAAGAGAAGCACAGAGGAATGGTATGAACCATTTTACTCCTATAATGATTTTTATATACTATTTAGATGAGCCGAAAAGAAACTTTATAACAAAAAGGTAACAAAACATAGCCTATAGGGCAAGGTAGAGGGAATCTCTACCCAAGGAAAAACTACTTAACAAGTGCTTTCCAATCACAGATAATCATGGATTCCTAAAATGCTTATAGATCTTTTGACCAGCTATTTATTGTTTCTGGAGAAAATAATTGAAGTGATGATTCGAGCAAGGATTGTGTTTGCAGTGTCATTGCCTAATCCTTTATTCATTTAAACATGTTGTGCAATGTGTTAGCTATTATTTTCCTTGAGCTTCTGTATTTTGCATGATTTATTTGTTTTATTACCCAAGTATGTCGGTTTAAGGATGGATCTTTCTATTGGGAGTGTGCCTAATATATAGCTGCTACATTGGAGGGATCTGTCATCGCATTGATAAATTTGGGATGTTATAAATATGTCATTTGTGAATTTATTGTAAAAGGTGATTGGTTACCGGTGGATTTGAATTTTTTTTTAGTGAAAAAAACAGAAGGGTGACACGTGAATATCTTATTTGTTGCAGAGGTTATGATGCTGCAAAGTAAATTCGAGCAAGACAGGAAACGGATACAACAACTGAGAGCTGCTAGAAAGTTTCGACCTTATTGAAGTTTTATGACCTACAAGGCCATGGCGTCTGAAGTTTTGTTTTTGTTTTCTTTTTTCGTCACCTTAATTATGAACCGTCGCCAATGACTTCAGATGGCTAGGATGTGTAGTTTGACATTATTGAAATATAATTCTGGGCCTCTTTGTTTTACTTTGTAACATTTTAACATTGGTTATATTTGTATGTGATATGTAATTGATTAGGCCTTTTTTTAATACTTGGATAGCTTTTGAAATCTAGGTTTGTTCCTTTCCAAAATTTATACTATAGTTTTTACATTTTTTGAAAAATTGAATCTAGAAGAAAATTTATTGAAATTTGCGAAACTGTTTAAAATATTTGTGAATTATATCAAAAGTTTTTAAATTTT

mRNA sequence

ATGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACATTGAGCCTGCGGTTGTAAAGGATTCTGATCAGTTCGGTGTGGAGGGAGAAGATGCTGAAAAGCCCAAGAAGTCTGATAAACTGAAGAAAGACAGGAAAAATAAAAAGAACCGAAAATCCTCTAATGATTGTGACAACTCGTTAGAAAATGGAAGAGCTATGCAGCTGGAAGCTTGTCAGCCCTTTGAGAATGGTGCATTCTTGAAAGGTAAGGCCAAGAAATCTTCCAAAAAGAAAAGAAAGGACTCTAGTTCTCTAGATGCCAAAGGATCGACAGAATTACATGAAGATATTGATGAAAATGATGTCTATCAAATCTCTTCTGGAGATGATGACTCTTCAAAGGGAATGAAAAGATGGATTACAGAATATCACAAAAGTAGACCGGGCTTGAATGTACTGCAACAGCGAATAGATGATTATATAACTGCACATGAGGCACAGCTAGAACAGGAAAAGAAGGAAAGGGAAGCTCAAGCTGCTGAAGGAGGATGGACAGTGGTTGTACATCAGAAGGGGAGGAAGAAGACCACAGATGCTGAAAGTGGGGTTACTGTGGGTTCAGTAGCGCAAAATTCTTTAGGGGATAAAATGTCCAAAAAGAAGAAGAATGAAGTTGGGTTGGATTTCTATCGATTTCAAAGAAGAGAAGCACAGAGGAATGAGGTTATGATGCTGCAAAGTAAATTCGAGCAAGACAGGAAACGGATACAACAACTGAGAGCTGCTAGAAAGTTTCGACCTTATTGA

Coding sequence (CDS)

ATGAAGAAGCGCGACAAAAGGCTTCGCGAGAGTAACATTGAGCCTGCGGTTGTAAAGGATTCTGATCAGTTCGGTGTGGAGGGAGAAGATGCTGAAAAGCCCAAGAAGTCTGATAAACTGAAGAAAGACAGGAAAAATAAAAAGAACCGAAAATCCTCTAATGATTGTGACAACTCGTTAGAAAATGGAAGAGCTATGCAGCTGGAAGCTTGTCAGCCCTTTGAGAATGGTGCATTCTTGAAAGGTAAGGCCAAGAAATCTTCCAAAAAGAAAAGAAAGGACTCTAGTTCTCTAGATGCCAAAGGATCGACAGAATTACATGAAGATATTGATGAAAATGATGTCTATCAAATCTCTTCTGGAGATGATGACTCTTCAAAGGGAATGAAAAGATGGATTACAGAATATCACAAAAGTAGACCGGGCTTGAATGTACTGCAACAGCGAATAGATGATTATATAACTGCACATGAGGCACAGCTAGAACAGGAAAAGAAGGAAAGGGAAGCTCAAGCTGCTGAAGGAGGATGGACAGTGGTTGTACATCAGAAGGGGAGGAAGAAGACCACAGATGCTGAAAGTGGGGTTACTGTGGGTTCAGTAGCGCAAAATTCTTTAGGGGATAAAATGTCCAAAAAGAAGAAGAATGAAGTTGGGTTGGATTTCTATCGATTTCAAAGAAGAGAAGCACAGAGGAATGAGGTTATGATGCTGCAAAGTAAATTCGAGCAAGACAGGAAACGGATACAACAACTGAGAGCTGCTAGAAAGTTTCGACCTTATTGA

Protein sequence

MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRIQQLRAARKFRPY*
Homology
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BLAST of CsaV3_5G013180 vs. NCBI nr
Match: XP_004140428.2 (ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sativus] >KAE8648110.1 hypothetical protein Csa_004716 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 6.5e-134
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60
           MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL
Sbjct: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60

Query: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120
           ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS
Sbjct: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120

Query: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180
           GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV
Sbjct: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180

Query: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240
           VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS
Sbjct: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240

Query: 241 KFEQDRKRIQQLRAARKFRPY 262
           KFEQDRKRIQQLRAARKFRPY
Sbjct: 241 KFEQDRKRIQQLRAARKFRPY 261

[Close]
BLAST of CsaV3_5G013180 vs. NCBI nr
Match: XP_011655116.1 (ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 2.7e-132
Identity = 261/264 (98.86%), Postives = 261/264 (98.86%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVK---DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCD 60
           MKKRDKRLRESNIEPAVVK   DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCD
Sbjct: 1   MKKRDKRLRESNIEPAVVKVNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCD 60

Query: 61  NSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQ 120
           NSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQ
Sbjct: 61  NSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQ 120

Query: 121 ISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGW 180
           ISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGW
Sbjct: 121 ISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGW 180

Query: 181 TVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMM 240
           TVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMM
Sbjct: 181 TVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMM 240

Query: 241 LQSKFEQDRKRIQQLRAARKFRPY 262
           LQSKFEQDRKRIQQLRAARKFRPY
Sbjct: 241 LQSKFEQDRKRIQQLRAARKFRPY 264

[Close]
BLAST of CsaV3_5G013180 vs. NCBI nr
Match: XP_004140427.2 (ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sativus])

HSP 1 Score: 480.7 bits (1236), Expect = 7.9e-132
Identity = 261/268 (97.39%), Postives = 261/268 (97.39%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVK-------DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS 60
           MKKRDKRLRESNIEPAVVK       DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS
Sbjct: 1   MKKRDKRLRESNIEPAVVKGLTVVNADSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS 60

Query: 61  NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120
           NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN
Sbjct: 61  NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120

Query: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA 180
           DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA
Sbjct: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA 180

Query: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN 240
           EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN
Sbjct: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN 240

Query: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 262
           EVMMLQSKFEQDRKRIQQLRAARKFRPY
Sbjct: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 268

[Close]
BLAST of CsaV3_5G013180 vs. NCBI nr
Match: XP_008456841.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo] >TYK14435.1 ribosomal RNA-processing protein 7-like protein A isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 473.0 bits (1216), Expect = 1.7e-129
Identity = 253/261 (96.93%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60
           MKKRDKRLRESNIEPAV KDSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SSNDCDN L
Sbjct: 1   MKKRDKRLRESNIEPAVAKDSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLL 60

Query: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120
           ENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS
Sbjct: 61  ENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120

Query: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180
           GDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV
Sbjct: 121 GDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180

Query: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240
           VHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRNEVMMLQS
Sbjct: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240

Query: 241 KFEQDRKRIQQLRAARKFRPY 262
           KFEQDRKRIQQLRAARKFRPY
Sbjct: 241 KFEQDRKRIQQLRAARKFRPY 261

[Close]
BLAST of CsaV3_5G013180 vs. NCBI nr
Match: XP_008456839.1 (PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo] >KAA0032191.1 ribosomal RNA-processing protein 7-like protein A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 466.1 bits (1198), Expect = 2.0e-127
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVK-------DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS 60
           MKKRDKRLRESNIEPAV K       DSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SS
Sbjct: 1   MKKRDKRLRESNIEPAVAKGLIVVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSS 60

Query: 61  NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120
           NDCDN LENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN
Sbjct: 61  NDCDNLLENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120

Query: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA 180
           DVYQISSGDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAA
Sbjct: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAA 180

Query: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN 240
           EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRN
Sbjct: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRN 240

Query: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 262
           EVMMLQSKFEQDRKRIQQLRAARKFRPY
Sbjct: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 268

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match: Q9Y3A4 (Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.1e-10
Identity = 44/147 (29.93%), Postives = 81/147 (55.10%), Query Frame = 0 

Query: 118 ISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEK---KEREAQAAE 177
           +S+       G+ +WI++Y  S P    L+  +D ++ A++ ++ +E+   KE E    E
Sbjct: 141 VSTESHPVKSGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 178 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNE 237
            GW V V ++GR+         ++  +      ++  +K+  +  L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASLRVL------ERERRKRSRKELLNFYAWQHRESKMEH 260

Query: 238 VMMLQSKFEQDRKRIQQLRAARKFRPY 262
           +  L+ KFE+D++RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match: Q5RA17 (Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.6e-10
Identity = 44/147 (29.93%), Postives = 81/147 (55.10%), Query Frame = 0 

Query: 118 ISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEK---KEREAQAAE 177
           +S+       G+ +WI++Y  S P    L+  +D ++ A++ ++ +E+   KE E    E
Sbjct: 141 VSTESHPVKTGIHKWISDYADSVPDPEALRVEVDTFMEAYDQKIAEEEAKAKEEEGVPDE 200

Query: 178 GGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNE 237
            GW V V ++GR+         ++  +      ++  +K+  +  L+FY +Q RE++   
Sbjct: 201 EGW-VKVTRRGRRPVLPRTEAASLRVL------ERERRKRTRKELLNFYAWQHRESKMEH 260

Query: 238 VMMLQSKFEQDRKRIQQLRAARKFRPY 262
           +  L+ KFE+D++RI+ LRA RKFRPY
Sbjct: 261 LAQLRKKFEEDKQRIELLRAQRKFRPY 280

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match: Q9D1C9 (Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 42/137 (30.66%), Postives = 76/137 (55.47%), Query Frame = 0 

Query: 128 GMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEK---KEREAQAAEGGWTVVVHQK 187
           G+ +WI++Y  S      L+  +D ++ A++ ++ +E+   KE E    E GW V V ++
Sbjct: 151 GIHKWISDYEDSVLDPEALRMEVDAFMEAYDKKIAEEEAKAKEEEGVPDEEGW-VKVTRR 210

Query: 188 GRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQ 247
           GR+         ++  +      +K  +K+  +  L+FY +Q RE +   +  L+ KFE+
Sbjct: 211 GRRPVLPRTEAASLRVL------EKEKRKRARKELLNFYAWQHRETKMEHLAQLRKKFEE 270

Query: 248 DRKRIQQLRAARKFRPY 262
           D++RI+ +RA RKFRPY
Sbjct: 271 DKQRIELMRAQRKFRPY 280

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match: O94683 (Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp7 PE=3 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.3e-07
Identity = 45/140 (32.14%), Postives = 70/140 (50.00%), Query Frame = 0 

Query: 128 GMKRWITEYHKSRPGLNVLQQRIDDY---ITAHEAQLEQEKKEREAQAAEGGWTVVVHQK 187
           G+KR++  Y +      VL + +D Y   +T  E   ++     + Q  E G+  VV + 
Sbjct: 114 GLKRYVESYDRQFVNPRVLAESVDSYMKRVTKKEIAEKRRLFAMKNQPDEDGFVTVV-RS 173

Query: 188 GRK---KTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSK 247
           GR    +  DAE               ++ KKK   +  DFYRFQ RE ++  ++ L  K
Sbjct: 174 GRAPVGRPQDAER--------------QLEKKKDTGIHKDFYRFQLREKKKKALLDLAHK 233

Query: 248 FEQDRKRIQQLRAARKFRPY 262
           FE D++RIQQL+  R+F+PY
Sbjct: 234 FEFDKQRIQQLKEKRQFKPY 238

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match: Q23314 (Ribosomal RNA-processing protein 7 homolog OS=Caenorhabditis elegans OX=6239 GN=ZC434.4 PE=3 SV=3)

HSP 1 Score: 52.4 bits (124), Expect = 9.2e-06
Identity = 43/142 (30.28%), Postives = 68/142 (47.89%), Query Frame = 0 

Query: 122 DDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKE---REAQAAEGGWT 181
           D +    +K   T Y K  P    +Q+  D Y+  ++ +  + +KE   + ++  E GW 
Sbjct: 136 DPEFPSVLKDSTTLYRKLFPSEEQIQEMADTYVERYDTEQTEARKEAKRKYSEPDEDGWI 195

Query: 182 VVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMML 241
            V       K   A   V +       +G   +KKKK  V L +Y FQ ++ ++ +   L
Sbjct: 196 TVT------KAKKAAKSVKLKKEDVPLIGGLNNKKKK--VDLAYYTFQIKKNRQEKAQEL 255

Query: 242 QSKFEQDRKRIQQLRAARKFRP 261
             KFE+DRKRI QL+ AR F+P
Sbjct: 256 LKKFEEDRKRITQLKQARNFKP 269

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match: A0A5D3CS72 (Ribosomal RNA-processing protein 7-like protein A isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G00940 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130
Identity = 253/261 (96.93%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60
           MKKRDKRLRESNIEPAV KDSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SSNDCDN L
Sbjct: 1   MKKRDKRLRESNIEPAVAKDSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLL 60

Query: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120
           ENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS
Sbjct: 61  ENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120

Query: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180
           GDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV
Sbjct: 121 GDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180

Query: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240
           VHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRNEVMMLQS
Sbjct: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240

Query: 241 KFEQDRKRIQQLRAARKFRPY 262
           KFEQDRKRIQQLRAARKFRPY
Sbjct: 241 KFEQDRKRIQQLRAARKFRPY 261

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match: A0A1S3C5F5 (ribosomal RNA-processing protein 7 homolog A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496672 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 8.0e-130
Identity = 253/261 (96.93%), Postives = 256/261 (98.08%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60
           MKKRDKRLRESNIEPAV KDSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SSNDCDN L
Sbjct: 1   MKKRDKRLRESNIEPAVAKDSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSSNDCDNLL 60

Query: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120
           ENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS
Sbjct: 61  ENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120

Query: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180
           GDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV
Sbjct: 121 GDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180

Query: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240
           VHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRNEVMMLQS
Sbjct: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRNEVMMLQS 240

Query: 241 KFEQDRKRIQQLRAARKFRPY 262
           KFEQDRKRIQQLRAARKFRPY
Sbjct: 241 KFEQDRKRIQQLRAARKFRPY 261

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match: A0A5A7SRM2 (Ribosomal RNA-processing protein 7-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G001210 PE=3 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.8e-128
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVK-------DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS 60
           MKKRDKRLRESNIEPAV K       DSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SS
Sbjct: 1   MKKRDKRLRESNIEPAVAKGLIVVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSS 60

Query: 61  NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120
           NDCDN LENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN
Sbjct: 61  NDCDNLLENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120

Query: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA 180
           DVYQISSGDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAA
Sbjct: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAA 180

Query: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN 240
           EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRN
Sbjct: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRN 240

Query: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 262
           EVMMLQSKFEQDRKRIQQLRAARKFRPY
Sbjct: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 268

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match: A0A1S3C4U8 (ribosomal RNA-processing protein 7 homolog A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496672 PE=3 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 9.8e-128
Identity = 253/268 (94.40%), Postives = 256/268 (95.52%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVK-------DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSS 60
           MKKRDKRLRESNIEPAV K       DSDQF VEGEDAEKPKKSDKLKKDRKNK NR+SS
Sbjct: 1   MKKRDKRLRESNIEPAVAKGLIVVHADSDQFNVEGEDAEKPKKSDKLKKDRKNKNNRQSS 60

Query: 61  NDCDNSLENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120
           NDCDN LENGRAMQLEACQP ENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN
Sbjct: 61  NDCDNLLENGRAMQLEACQPLENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDEN 120

Query: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAA 180
           DVYQISSGDDDSSKGMKRWITEYHKSRPGLN+LQQRIDDYITAHEAQLEQEKKEREAQAA
Sbjct: 121 DVYQISSGDDDSSKGMKRWITEYHKSRPGLNLLQQRIDDYITAHEAQLEQEKKEREAQAA 180

Query: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRN 240
           EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDK+SKKKKNEVGLDFYRFQRREAQRN
Sbjct: 181 EGGWTVVVHQKGRKKTTDAESGVTVGSVAQNSLGDKISKKKKNEVGLDFYRFQRREAQRN 240

Query: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 262
           EVMMLQSKFEQDRKRIQQLRAARKFRPY
Sbjct: 241 EVMMLQSKFEQDRKRIQQLRAARKFRPY 268

[Close]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match: A0A6J1FWJ5 (uncharacterized protein DDB_G0283697 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447572 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 2.3e-100
Identity = 215/312 (68.91%), Postives = 241/312 (77.24%), Query Frame = 0 

Query: 2   KKRDKRLRESNIEPAVVK------------------------------------------ 61
           KKRDKRLRESN EPAV K                                          
Sbjct: 6   KKRDKRLRESNTEPAVAKGSIATEVDEEKKRRRSSKRRLQQTSSDETDQLNVKAVNALEA 65

Query: 62  ---------DSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSLENGRAMQLEA 121
                    D DQF VEGEDAEKP+K+D++KK+RKNKKNRKSSN+C+NSLENGRA Q EA
Sbjct: 66  RNGVSVVKEDWDQFDVEGEDAEKPRKTDEVKKERKNKKNRKSSNNCENSLENGRATQPEA 125

Query: 122 CQPFE-NGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISSGDDDSSKGM 181
            QP E +GAFLKGKAKKSSKKKR DSSSLD K S E  +D++ENDVYQ+S GD+D+SKGM
Sbjct: 126 YQPLEDSGAFLKGKAKKSSKKKRNDSSSLDPKKSIESSDDVNENDVYQVSVGDEDTSKGM 185

Query: 182 KRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVVVHQKGRKKT 241
           K+WI EY++SRPGL VLQQRIDDYITAHEA+LEQEK+EREAQAAEGGWTVVVHQKGRKKT
Sbjct: 186 KKWIKEYYESRPGLKVLQQRIDDYITAHEARLEQEKEEREAQAAEGGWTVVVHQKGRKKT 245

Query: 242 TDAESGVTVGSVAQNSLGDKMSKKKKNEVGLDFYRFQRREAQRNEVMMLQSKFEQDRKRI 262
           TDAESGVTVGSVAQN++ DK+SKKK+ EVGLDFYRFQRREAQRNE++MLQSKFEQD+KRI
Sbjct: 246 TDAESGVTVGSVAQNAVEDKISKKKRKEVGLDFYRFQRREAQRNEILMLQSKFEQDKKRI 305

[Close]
BLAST of CsaV3_5G013180 vs. TAIR 10
Match: AT5G38720.1 (unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - 38; Bacteria - 1038; Metazoa - 4949; Fungi - 1086; Plants - 485; Viruses - 44; Other Eukaryotes - 5779 (source: NCBI BLink). )

HSP 1 Score: 202.6 bits (514), Expect = 3.9e-52
Identity = 129/262 (49.24%), Postives = 182/262 (69.47%), Query Frame = 0 

Query: 1   MKKRDKRLRESNIEPAVVKDSDQFGVEGEDAEKPKKSDKLKKDRKNKKNRKSSNDCDNSL 60
           MKKR +++   +I   +        +E    EK K  +K  K  K KK RK+     +S+
Sbjct: 76  MKKRKEKVGNVDISEPI--------LEAISTEKVK--EKKGKMNKTKKKRKAEEITRSSV 135

Query: 61  ENGRAMQLEACQPFENGAFLKGKAKKSSKKKRKDSSSLDAKGSTELHEDIDENDVYQISS 120
           E+ +                + K KKS+KKK+ D +S   K   ++ E   E DVYQISS
Sbjct: 136 EDLKR---------------ESKFKKSNKKKKMDMTS---KKENKIEE---EEDVYQISS 195

Query: 121 GDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAHEAQLEQEKKEREAQAAEGGWTVV 180
           GD+D ++GMK+W+++Y++ RPGL+ LQ+RIDD++TAHE +LEQEK+++EA+AAEGGWTVV
Sbjct: 196 GDEDCTRGMKKWVSDYYEGRPGLDELQKRIDDFMTAHEERLEQEKQDKEAKAAEGGWTVV 255

Query: 181 VHQKGRKKTTDAESGVTVGSVAQNSLGDKMSKKKKNE-VGLDFYRFQRREAQRNEVMMLQ 240
           VH KGRKKTT++E+G  VGS +Q +L DK++KKK++E V   FYRFQRR+AQRNE++ LQ
Sbjct: 256 VHHKGRKKTTESETGTAVGSFSQAALEDKIAKKKQSEPVAHGFYRFQRRDAQRNELLALQ 306

Query: 241 SKFEQDRKRIQQLRAARKFRPY 262
           SKFE+D+KRIQQLRAAR+F+P+
Sbjct: 316 SKFEEDKKRIQQLRAARRFKPF 306

The following BLAST results are available for this feature:
BLAST of CsaV3_5G013180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140428.26.5e-134100.00ribosomal RNA-processing protein 7 homolog A isoform X3 [Cucumis sativus] >KAE86... [more]
XP_011655116.12.7e-13298.86ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis sativus][more]
XP_004140427.27.9e-13297.39ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis sativus][more]
XP_008456841.11.7e-12996.93PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X2 [Cucumis melo... [more]
XP_008456839.12.0e-12794.40PREDICTED: ribosomal RNA-processing protein 7 homolog A isoform X1 [Cucumis melo... [more]
BLAST of CsaV3_5G013180 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9Y3A42.1e-1029.93Ribosomal RNA-processing protein 7 homolog A OS=Homo sapiens OX=9606 GN=RRP7A PE... [more]
Q5RA173.6e-1029.93Ribosomal RNA-processing protein 7 homolog A OS=Pongo abelii OX=9601 GN=RRP7A PE... [more]
Q9D1C91.0e-0930.66Ribosomal RNA-processing protein 7 homolog A OS=Mus musculus OX=10090 GN=Rrp7a P... [more]
O946838.3e-0732.14Ribosomal RNA-processing protein 7 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
Q233149.2e-0630.28Ribosomal RNA-processing protein 7 homolog OS=Caenorhabditis elegans OX=6239 GN=... [more]
BLAST of CsaV3_5G013180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CS728.0e-13096.93Ribosomal RNA-processing protein 7-like protein A isoform X2 OS=Cucumis melo var... [more]
A0A1S3C5F58.0e-13096.93ribosomal RNA-processing protein 7 homolog A isoform X2 OS=Cucumis melo OX=3656 ... [more]
A0A5A7SRM29.8e-12894.40Ribosomal RNA-processing protein 7-like protein A isoform X1 OS=Cucumis melo var... [more]
A0A1S3C4U89.8e-12894.40ribosomal RNA-processing protein 7 homolog A isoform X1 OS=Cucumis melo OX=3656 ... [more]
A0A6J1FWJ52.3e-10068.91uncharacterized protein DDB_G0283697 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of CsaV3_5G013180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G38720.13.9e-5249.24unknown protein; Has 13419 Blast hits to 9093 proteins in 698 species: Archae - ... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..174
NoneNo IPR availableGENE3D6.10.250.1770coord: 219..261
e-value: 8.5E-18
score: 66.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..128
NoneNo IPR availableCDDcd12951RRP7_Rrp7Acoord: 128..261
e-value: 3.0716E-40
score: 133.943
IPR024326Ribosomal RNA-processing protein 7, C-terminal domainPFAMPF12923RRP7coord: 138..261
e-value: 4.2E-28
score: 97.9
IPR040446Ribosomal RNA-processing protein 7PANTHERPTHR13191RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATEDcoord: 31..261

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G013180.1CsaV3_5G013180.1mRNA