CsaV3_5G010030 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G010030
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	non-specific lipid-transfer protein 2P-like
Location	chr5: 5737654 .. 5738424 (-)
RNA-Seq Expression	CsaV3_5G010030
Synteny	CsaV3_5G010030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTATGAGAGGCTATAAAAGGAGAGGTTGAAAGCATCAGCAAAAGCACAGAAACACACAAATTCGTTATTCCTCCCTTCCTCGTAACACAATCAAATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAGAAACCCTACTTACTTGAGTTTGGACTCTTCTACAAGAATTAAGTATTGTTATGTCTCTTTAGTTTAATCTAATATACAATATTCTGATCCCAACTAAAAATAAAGGGAAAACCAACCTATACTTTCTATATAAATTAAAAGCTCAATATTACGTTTTAATATACCGCCTTACCCATTATGAGTTAATAATAAGTCAGTAGATAGACATCTCAAATTGGTATTATGGCTAGTGCTATCTTTTAAGGGTTTAATTTTGTTATTTTGTCAGATATATTCCATCGTTGGAAATATTAATTAAGCTAAAAATAATAGAAGATTAAGTCAACATTACCTCTTTTTGAAGAAAAGAAACTTTGCCCTTCT

mRNA sequence

ATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAG

Coding sequence (CDS)

ATGAAGAATTTTCCTATCACAATCGTTGTTTGCATTTTCGTGGTGGCAACCACGGTGGCTCTTCTTAATGGCGCTCCTCCGGTGGTTGCTCAAGTGGAATGCGACCCATCACAGCTCTCGTCATGCACAGCAGCATTTTTTGGGATGACGCCCAGTCAGACATGTTGCAACAAGTTGAGGGAGGCACAACCATGCTACTGTGAATATATCAATGATCCAGATTTGAGGAGTTTCGTGAATTCTAGTGCGGCTAGAAGAATTGCTAAATCCTGCAACATTAGCTTACCAACTGAGGCTGACTGCTCTAAATAG

Protein sequence

MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK*

Homology

[Close]

BLAST of CsaV3_5G010030 vs. NCBI nr
Match: KAE8648021.1 (hypothetical protein Csa_005848 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 6.1e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60
           MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR
Sbjct: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60

Query: 61  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 104
           EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 61  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 103

[Close]

BLAST of CsaV3_5G010030 vs. NCBI nr
Match: KAE8649342.1 (hypothetical protein Csa_014385 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 8.8e-50
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 3   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 62
           NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA
Sbjct: 5   NFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLREA 64

Query: 63  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 104
           QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 65  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 105

[Close]

BLAST of CsaV3_5G010030 vs. NCBI nr
Match: XP_008444079.1 (PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA0064163.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa] >TYK02866.1 non-specific lipid-transfer protein 2P-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
           MKNFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KL
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKL 60

Query: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 102
           R  QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 61  RAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

[Close]

BLAST of CsaV3_5G010030 vs. NCBI nr
Match: KAG6581747.1 (hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.1 bits (292), Expect = 9.2e-23
Identity = 62/102 (60.78%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKL 60
           MK F IT VVC FV    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKL
Sbjct: 1   MKKFGIT-VVCFFV----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKL 60

Query: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 102
           RE QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 61  REQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 97

[Close]

BLAST of CsaV3_5G010030 vs. NCBI nr
Match: KAG7026200.1 (hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-22
Identity = 61/102 (59.80%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLS-SCTAAFFGMTPSQTCCNKL 60
           MK F IT VVC F+    VA L GA  V AQ  CDP  L+  C  AF GM PS  CCNKL
Sbjct: 1   MKKFGIT-VVCFFM----VAFLTGAHHVGAQQTCDPQLLAIPCGLAFSGMRPSTRCCNKL 60

Query: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 102
           RE QPCYC Y+N+PDL+ FV+S AARRIA+ CNI++PT+A+C
Sbjct: 61  REQQPCYCAYLNNPDLKGFVDSPAARRIARDCNITIPTQAEC 97

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.1e-13
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 9  VVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYC 68
          VVC  VV     +  G  PV   V C+P++LSSC  A   G  PS TCC+KL+  +PC C
Sbjct: 11 VVCAVVVVALFLIDVG--PVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPCLC 70

Query: 69 EYINDPDLRSFVNSSAARRIAKSCNISLP 97
           YI +P L+ +VNS  A+++  +C ++ P
Sbjct: 71 NYIKNPSLKQYVNSPGAKKVLSNCGVTYP 97

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.8e-12
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 34 CDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKSCN 93
          C   QLS C AA    T PS  CCNKL+E +PC C Y+ DP+L+++VNS  AR+ A SC 
Sbjct: 3  CSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSCG 62

Query: 94 ISL 96
          ++L
Sbjct: 63 VAL 65

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.2e-11
Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 32 VECDPSQLSSCTAAFFGMTPS-QTCCNKLREAQPCYCEYINDPDLRSFVNSSAARRIAKS 91
          V C P QLS C        PS  TCC KLRE +PC C Y+ +P LR +VNS  AR++A +
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 92 CNISLP 97
          C + +P
Sbjct: 61 CGVPVP 66

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-09
Identity = 36/91 (39.56%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 8  IVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCY 67
          + V +  VA  VA   G    VA   C+  QL+ CT A   G  P+  CC+ LR  Q C+
Sbjct: 5  LAVLVLAVA-MVAACGGGVVGVAGAGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCF 64

Query: 68 CEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
          C++  DP    +VNS  AR+   SC I+LPT
Sbjct: 65 CQFAKDPRYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09
Identity = 35/91 (38.46%), Postives = 47/91 (51.65%), Query Frame = 0


Query: 8  IVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCY 67
          + V +  VA  VA   G    VA   C+  QL+ C  A   G  P+  CC+ LR  Q C+
Sbjct: 5  LAVLVLAVA-MVAACGGGVVGVAGASCNAGQLTVCAGAIAGGARPTAACCSSLRAQQGCF 64

Query: 68 CEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
          C++  DP    +VNS  AR+   SC I+LPT
Sbjct: 65 CQFAKDPRYGRYVNSPNARKAVSSCGIALPT 94

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL
Match: A0A0A0KZL4 (Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa_4G146240 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60
           MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR
Sbjct: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMTPSQTCCNKLR 60

Query: 61  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 104
           EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK
Sbjct: 61  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADCSK 103

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL
Match: A0A5A7V7R4 (Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00730 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-34
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
           MKNFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KL
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKL 60

Query: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 102
           R  QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 61  RAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL
Match: A0A1S3BAC3 (non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487519 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.3e-34
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
           MKNFPIT+VVCIFVVATTVALLNG PPV AQ  CD SQLSSC  AF FG  P+Q CC KL
Sbjct: 1   MKNFPITLVVCIFVVATTVALLNGPPPVAAQTVCDASQLSSCAPAFLFGGNPNQECCTKL 60

Query: 61  REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPTEADC 102
           R  QPCYCEY  DP+L++FVNS AARR+A++CNI+ PT ADC
Sbjct: 61  RAEQPCYCEYFGDPNLQNFVNSDAARRVAEACNITFPTMADC 102

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.8e-15
Identity = 49/98 (50.00%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAF-FGMTPSQTCCNKL 60
          MK FPITI      +A  VALL+GA  V   V C P +LSSC  A     TPS TCCNKL
Sbjct: 1  MKKFPITI--AFLFMAVMVALLSGA-RVAEAVNCSPMELSSCAGAITSSSTPSSTCCNKL 60

Query: 61 REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
          RE +PC C YI +P LR +V S  AR++A  C +  P+
Sbjct: 61 REQKPCLCGYIRNPALRPYVQSPGARKVAAKCGVPFPS 95

[Close]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL
Match: A0A444YYV9 (AAI domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g074443 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.1e-13
Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 1  MKNFPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMT-PSQTCCNKL 60
          MKNF    V+ + V  +   L+  +PPV A V C P QLS C AAF   T PS TCC +L
Sbjct: 2  MKNFS-NYVMAVAVAMSLFLLVVVSPPVEA-VTCSPLQLSPCLAAFTSDTPPSSTCCQRL 61

Query: 61 REAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
          +E +PC C Y+ +P LR +VNS A+R+IA SC +  PT
Sbjct: 62 KEQRPCLCGYLKNPSLRQYVNSPASRKIASSCGVPFPT 97

[Close]

BLAST of CsaV3_5G010030 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-15
Identity = 40/90 (44.44%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 9  VVCIFVVATTVALLNGAPPVVAQVECDPSQLSSCTAAFFGMT-PSQTCCNKLREAQPCYC 68
          V+ + V+A   A+L    PV   V C P QL+SC AA    + PS+ CC KLRE QPC C
Sbjct: 4  VMWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLC 63

Query: 69 EYINDPDLRSFVNSSAARRIAKSCNISLPT 98
           Y+ +P LR +V+S  AR+++ SC I  P+
Sbjct: 64 GYMRNPTLRQYVSSPNARKVSNSCKIPSPS 93

[Close]

BLAST of CsaV3_5G010030 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 9.2e-13
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 7  TIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSC-TAAFFGMTPSQTCCNKLREAQPC 66
          T +V +F +A  + ++    P    V C P QLS C TA      PS  CC KL+E +PC
Sbjct: 6  TTMVSLFALAAVLLMI--LAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPC 65

Query: 67 YCEYINDPDLRSFVNSSAARRIAKSCNISLP 97
           C Y+ +P LR FV++  AR+++KSC + +P
Sbjct: 66 LCGYMRNPSLRRFVSTPNARKVSKSCKLPIP 94

[Close]

BLAST of CsaV3_5G010030 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-12
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0


Query: 4   FPITIVVCIFVVATTVALLNGAPPVVAQVECDPSQLSSC-TAAFFGMTPSQTCCNKLREA 63
           F + ++V    +  T   L+G     A V CD  QLSSC T    G+ PS  CC KL+E 
Sbjct: 11  FVVGVMVSPVSIRATEVKLSGGE---ADVTCDAVQLSSCATPMLTGVPPSTECCGKLKEQ 70

Query: 64  QPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
           QPC+C YI DP    +V S+ A++   +C +  PT
Sbjct: 71  QPCFCTYIKDPRYSQYVGSANAKKTLATCGVPYPT 102

[Close]

BLAST of CsaV3_5G010030 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 8   IVVCIFVVATTVALLNGAPPVV------AQVECDPSQLSSC-TAAFFGMTPSQTCCNKLR 67
           +V  +FV+ T ++ +     VV        V CD +QLSSC TA   G  PS  CC KL+
Sbjct: 6   VVFILFVLGTMLSPVPVKARVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLK 65

Query: 68  EAQPCYCEYINDPDLRSFVNSSAARRIAKSCNISLPT 98
           E + C C YI +P   S+V S  AR+   +C+++ PT
Sbjct: 66  EHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPT 102

[Close]

BLAST of CsaV3_5G010030 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 1.9e-10
Identity = 33/88 (37.50%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 12 IFVVATTVALLNGAPP--VVAQVECDPSQLSSCTAAFF-GMTPSQTCCNKLREAQPCYCE 71
          +F   T + +L  A    V A   C+P+QLS C      G  PS  CC+K++E Q C C+
Sbjct: 9  VFFTCTILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQ 68

Query: 72 YINDPDLRSFVNSSAARRIAKSCNISLP 97
          Y+ +P+ +SF+NS  A+ IA  C+   P
Sbjct: 69 YLKNPNFKSFLNSPNAKIIATDCHCPYP 96

The following BLAST results are available for this feature:

BLAST of CsaV3_5G010030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648021.1	6.1e-51	100.00	hypothetical protein Csa_005848 [Cucumis sativus]	[more]
KAE8649342.1	8.8e-50	100.00	hypothetical protein Csa_014385 [Cucumis sativus]	[more]
XP_008444079.1	6.8e-34	72.55	PREDICTED: non-specific lipid-transfer protein 2P-like [Cucumis melo] >KAA006416...	[more]
KAG6581747.1	9.2e-23	60.78	hypothetical protein SDJN03_21749, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7026200.1	2.0e-22	59.80	hypothetical protein SDJN02_12699, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_5G010030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43681	3.1e-13	41.57	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 ...	[more]
P86809	5.8e-12	50.79	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=27811...	[more]
P82353	2.2e-11	46.97	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1	[more]
Q10ST8	1.6e-09	39.56	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2XBN5	3.5e-09	38.46	Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CsaV3_5G010030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZL4	2.9e-51	100.00	Putative lipid transfer protein family protein OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5A7V7R4	3.3e-34	72.55	Non-specific lipid-transfer protein 2P-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BAC3	3.3e-34	72.55	non-specific lipid-transfer protein 2P-like OS=Cucumis melo OX=3656 GN=LOC103487...	[more]
A0A6J1GTR0	5.8e-15	50.00	non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A444YYV9	1.1e-13	47.96	AAI domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B05g074443 PE=4...	[more]

BLAST of CsaV3_5G010030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48750.1	2.6e-15	44.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G18280.1	9.2e-13	39.56	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38170.1	2.7e-12	38.95	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G38160.1	1.5e-10	38.14	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G73780.1	1.9e-10	37.50	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 34..101 e-value: 0.0018 score: 27.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..101 e-value: 1.1E-7 score: 31.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..98 e-value: 1.1E-20 score: 75.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..97
None	No IPR available	PANTHER	PTHR33214:SF44	LIPID TRANSFER PROTEIN FAMILY PROTEIN-RELATED	coord: 1..97
IPR033872	Non-specific lipid-transfer protein type 2	PANTHER	PTHR33214	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G010030.1	CsaV3_5G010030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport