CsaV3_5G009020 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G009020
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein yippee-like
Location	chr5: 5648508 .. 5651415 (-)
RNA-Seq Expression	CsaV3_5G009020
Synteny	CsaV3_5G009020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTACAAAAATTCTTATCTCGTGTCCCCTCCCTTGAAGGCTGATGAAATTCTCCGTGTATGTAGAACACCATTTTGTTGGCACACGCGCATCTCACTTAAAAAGATCATCCAATGTTCATAGACAGGACAACGAAGTTTCATGAATAATATAGCGAACCATTCTGATTTTGACATAACTCCTTCATCATCTTCATCCCCAAACCTTTTTTCTTTTCTTTCTAATTTGATTTCGCAACCTTTCTCAATTCACAACAAAGGGGCTTTACATTCGAATCAACTTGAGAAGTGGGCTTCTTTGCAAAACGTGATTTCCATTTCCCATTTTAGAACACCCCCAGATTCTTTCTTCTCCTTCTTCTTCTTCTTCTTCAGGGCTCTGATGATGATAATTCTCGGTTCTCTGCTTGACCCTTCTGTCTAATATTTTGTCGATTCCTCATTATGGGTTTTGTTTTTATTTTTTTGCAGATTATTTGTGGGAAGCTTAAGATTCAAAGCTATGGGAAGATTATTCGTGGTGAATTTGGAAGGGCAGATCTATAGCTGCAAGTTCTGCCGGACCCATCTTGCTCTTTACGACGATATCATTTCTAAGGTTTCTCTTCCTTTTACCTGTTTTCTTCTCTGGTTTCTTGTCGATTTTTCCCTCTAGTTCTCCCATGTTCGTAGATAGTATTAGTAGGTTTATTTAAATTCAAGTTTCTGTTACTTGTTAATAATTTGAACTTGGGGTTGCGTACCGGTATTAATTAGGAACGATCCAATCCTAAAAAATAAATAAAACACAGCATGTCGGTGATGTCACAAACCACTATCGTATTGGGATACCCCTTTCATCATAAAATTATGAAGTTCCAGACCAGATATTCATTTTAATCACCTTTTTAAAAAAATTTAAATTGAGAGCCAGTCAACTAGTGATTAAAAATGAAAATCTAATAATCAAAATCTCGTTAGGGACGCAATAATGCATTTTAGGCGGTGCTAGAGTGCACTATGGTGTAATTAGAAGGTTAGTTTTCATTCTCTCTTTTACGATTATATCATTTTGTATTAACACCGCTCGAATTGATTCATTTATATAAAATTCTATTTGAACTTTGATCTCTTCGTTGAGAACATTTGCGATTGAAGAGTTGTTTTTTTTATGTTGCATGTTTCCAAATTTCTATATTGTTGGCTCCAATTTTGCTGGCATTCTATCTTAAATTGTGTTTACTGCTGAACTTTGTAATTTAGGAACTTGGGAACAAAAGGAGGTATGATAAGTTTTTTGACTGGGAAAATTTTATGTTGCTGTCCTGTCCCAATATCCTCAAAAGTTGCTTAAACCCACATTGTAACTCCTTGTACTGTTTGTGTTGTTCCATTCAGTCCTTCCACAGCAGACATGGGAAAGCTTACCTCTTCAATAAGGTGTAAGTTCTTCTTGATTTTAGAGTTTGGACATTGATTAACACACTCTTGTCTCCTCCCCTAGGTGCATGTTTGACAAATGGTTTTTATAAGCCTGGGTCGTTTGTGCAATTTGTGTTTGGATTGTATGAATAAGTAGGTTATTAAAGACTTGTGTAACCCATGTTATGGTTGTCGGTTTCATATTATGTTAAAGTCGATGTATGATTTTTTTAAAAAAGTTATAGGCTTCTTATGTGTGGATTGGATTGATCAGAATTTTGTAAGGGGTTAACAAACTCATAACTTTGTGTTCTCATCTTTGTAGCTTCAAGTTAGCAAGGGTCTTCTTTAATAGATACAAAAACTTGGCATATAATGATCAGTAATTTGATGTTAATGTTTCATAACAGAACTCGTGGGATTTGTGAGAATACATAGGAGAGTGATTTTACTGAAAATTCATTCTCAAATAATCCAATGCTCCACAATCTAGTTACAAAAACTATGTCAACAAATGAATCTCTTTATTCATTCAAATAGTGATTTACACGCATACCTGTTTGTATTTTCACTTTCGAAGTGTTTCTCATTCTAAATCGTTGTTACTTTCTGATAACGGTAGAATAAGCTAGAGTTTCTCTAAAACTAATTCTAAAAGTGCCTCATCTCATAGACTGGGTTCTCATTGTCAAAACTTTCTCCAGGGTAAATGTTTGCTTAGGTAAGATAGAAGAAAGATTGATGATGACAGGGATGCATACAGTTGCTGATATCTTCTGTGTGGGCTGTGGATCAATGGTGGGATGGAAATATGTAAGATTAGAAGCAAAGATTTGAAATATCAACTATTTATTTTCTTTCTTACTTCTCAACTATTCTTATGGTTTCTTTCAGGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAAGGAAAATCTGTACTTGAAAGGTAAGTACTCAATCGACAAACGGAAAAATAAAAGTAAAATGCAGATACCCTCAACATATGAAAAATCTCAGCATTTAAAACCCTTGAGATGCCTTGAAAAGGATATCCCTAGATTATACGACATCTTGAATTACTGCAGAACAAACGTGGAAATCCAAAATGCCCATGAAATGAAAATTATAGATTCTCACCAAACAAATCATTCTTAAAAGGTAAGTTGAAAAAAGTTACATTGTTTGAACAGGTTCAAGGTTTTGGGACCTGATGAAAGCAGTCACTGGGTCAGTCATGAAGCAGATACTGGTGGAAGTGAAGGAGATGATGTTTGATTTCTGTATTCACTCAACTGTAAATTCTGTAAAACCCTAAAAATTTTCTAGTTTGAACTTGAACTCTAACGATGTTGATACTTGTACTTTGTTTCTCCCACCTAAAAATTCTTGATGTTTCATGTTGGGATGAGAATTGAACAATAATTATTGTATCTCTTAAAATAAATGATGTTGTCGAAGAAAACAATATTGTAAAGGTTTATTTAGTAAAGGGATTTGAACGGC

mRNA sequence

ATGGGAAGATTATTCGTGGTGAATTTGGAAGGGCAGATCTATAGCTGCAAGTTCTGCCGGACCCATCTTGCTCTTTACGACGATATCATTTCTAAGGAACTTGGGAACAAAAGGAGTCCTTCCACAGCAGACATGGGAAAGCTTACCTCTTCAATAAGGGTAAATGTTTGCTTAGGTAAGATAGAAGAAAGATTGATGATGACAGGGATGCATACAGTTGCTGATATCTTCTGTGTGGGCTGTGGATCAATGGTGGGATGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAAGGAAAATCTGTACTTGAAAGGTTCAAGGTTTTGGGACCTGATGAAAGCAGTCACTGGGTCAGTCATGAAGCAGATACTGGTGGAAGTGAAGGAGATGATGTTTGA

Coding sequence (CDS)

ATGGGAAGATTATTCGTGGTGAATTTGGAAGGGCAGATCTATAGCTGCAAGTTCTGCCGGACCCATCTTGCTCTTTACGACGATATCATTTCTAAGGAACTTGGGAACAAAAGGAGTCCTTCCACAGCAGACATGGGAAAGCTTACCTCTTCAATAAGGGTAAATGTTTGCTTAGGTAAGATAGAAGAAAGATTGATGATGACAGGGATGCATACAGTTGCTGATATCTTCTGTGTGGGCTGTGGATCAATGGTGGGATGGAAATATGAGACTGCCCATGAAAAGAACCAAAAATACAAGGAAGGAAAATCTGTACTTGAAAGGTTCAAGGTTTTGGGACCTGATGAAAGCAGTCACTGGGTCAGTCATGAAGCAGATACTGGTGGAAGTGAAGGAGATGATGTTTGA

Protein sequence

MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGKIEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHWVSHEADTGGSEGDDV*

Homology

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BLAST of CsaV3_5G009020 vs. NCBI nr
Match: XP_031740894.1 (protein yippee-like isoform X2 [Cucumis sativus] >KAE8648019.1 hypothetical protein Csa_021405 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 1.3e-72
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120

Query: 121 VSHEADTGGSEGDDV 136
           VSHEADTGGSEGDDV
Sbjct: 121 VSHEADTGGSEGDDV 135

[Close]

BLAST of CsaV3_5G009020 vs. NCBI nr
Match: XP_031740893.1 (protein yippee-like isoform X1 [Cucumis sativus])

HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58
Identity = 124/174 (71.26%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKR---------------------- 60
           MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKR                      
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRRYDKFFDWENFMLLSCPNILKS 60

Query: 61  --SPSTADMGKLTSSIR---------------VNVCLGKIEERLMMTGMHTVADIFCVGC 120
             +P    +  L  SI+               VNVCLGKIEERLMMTGMHTVADIFCVGC
Sbjct: 61  CLNPHCNSLYCLCCSIQSFHSRHGKAYLFNKVVNVCLGKIEERLMMTGMHTVADIFCVGC 120

Query: 121 GSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHWVSHEADTGGSEGDDV 136
           GSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHWVSHEADTGGSEGDDV
Sbjct: 121 GSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHWVSHEADTGGSEGDDV 174

[Close]

BLAST of CsaV3_5G009020 vs. NCBI nr
Match: XP_004149238.1 (protein yippee-like isoform X3 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 6.7e-58
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALYDDIISK   ++   +      L + + VNVCLGK
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKSFHSRHGKA-----YLFNKV-VNVCLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120

Query: 121 VSHEADTGGSEGDDV 136
           VSHEADTGGSEGDDV
Sbjct: 121 VSHEADTGGSEGDDV 129

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BLAST of CsaV3_5G009020 vs. NCBI nr
Match: XP_008463228.1 (PREDICTED: protein yippee-like [Cucumis melo] >XP_016902985.1 PREDICTED: protein yippee-like [Cucumis melo] >XP_016902986.1 PREDICTED: protein yippee-like [Cucumis melo] >KAA0037411.1 protein yippee-like [Cucumis melo var. makuwa] >TYJ97502.1 protein yippee-like [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALY+DIISK   ++   +      L + + VNVCLGK
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYEDIISKSFHSRHGKA-----YLFNKV-VNVCLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120

Query: 121 -VSHEADTGGSEGDDV 136
            VSHEAD GGSEGDDV
Sbjct: 121 GVSHEADAGGSEGDDV 130

[Close]

BLAST of CsaV3_5G009020 vs. NCBI nr
Match: XP_038893239.1 (protein yippee-like isoform X1 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 6.5e-53
Identity = 112/138 (81.16%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKE---LGNKRSPSTADMGKLTSSIRVNVC 60
           MGRLFVVNLEGQIYSCK+CRTHLALYDDIISKE    G     S      L + + VNVC
Sbjct: 1   MGRLFVVNLEGQIYSCKYCRTHLALYDDIISKEPRTKGGLSFHSRHGKAYLFNKV-VNVC 60

Query: 61  LGKIEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDES 120
           LGKIEERLMMTGMHTVADIFCVGCGS+VGWKYETAHEKNQKYKEGKSVLERFKVLGPDE+
Sbjct: 61  LGKIEERLMMTGMHTVADIFCVGCGSIVGWKYETAHEKNQKYKEGKSVLERFKVLGPDEN 120

Query: 121 SHWVSHEADTGGSEGDDV 136
           SH VSHEAD GGS GDDV
Sbjct: 121 SHRVSHEADAGGS-GDDV 136

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BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.9e-43
Identity = 87/135 (64.44%), Postives = 102/135 (75.56%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFV+ LEG+IYSCK C THLAL ++I+SK    K   +      L S + VNV  G+
Sbjct: 1   MGRLFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKA-----YLFSKV-VNVTSGE 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IE R+MMTGMHTVADIFCV CGS+VGWKYETAHEK+QKYKEGKSVLERFK+ GPD S +W
Sbjct: 61  IENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKITGPDGSHYW 120

Query: 121 VSHEADTGGSEGDDV 136
            SH+    GS+ DDV
Sbjct: 121 ASHDTHVAGSDADDV 129

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLF+VNLEG+ YSCK C+T+LAL DD++SK   ++   +      L S + VNV  GK
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKA-----YLFSKV-VNVYAGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E+R+MMTGMHTV DI+CV CGS VGWKYE A EKNQKYKEGKSVLER+KV GPD +++W
Sbjct: 61  KEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYW 120

Query: 121 VSHEADTGGSEGDD 135
           V+ E + G S+ DD
Sbjct: 121 VAQEVEAGDSDTDD 128

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-33
Identity = 71/134 (52.99%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFV++LEG +YSCK+C+TH A+ +DIISK    K          L  ++ VNV +G+
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHG-----RAYLFDNV-VNVTVGE 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E R+M+TG HTVADIFCV CGS+VGWKYE A++K+QKYKEGK +LERFKVLGP    + 
Sbjct: 61  KEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYD 120

Query: 121 VSHEADTGGSEGDD 135
           ++      GS+ ++
Sbjct: 121 MNQNEPMTGSDDEE 128

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-32
Identity = 70/126 (55.56%), Postives = 90/126 (71.43%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGR+F+V+LEG IY CK C+THL+   DI+SK    K          L +++ VNV +G+
Sbjct: 1   MGRVFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNG-----RAYLFNNV-VNVSVGE 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E+R+M+TG+H V DIFCVGCGS VGWKYE AHEK+QKYKEGKSVLE +K+ GP +S+  
Sbjct: 61  KEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDL 120

Query: 121 VSHEAD 127
           VS   D
Sbjct: 121 VSDGDD 120

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-31
Identity = 70/133 (52.63%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGR+F V LEG+ Y C+FCRTHLAL DD++S+    +R  +         +  VN+ +G 
Sbjct: 1   MGRIFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKA------YLFNRSVNISMGP 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           +EERLM++GMHTVADIFC  CG  VGWKYE+AHEK QKYKEGK VLER +++  DE    
Sbjct: 61  LEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIV--DEIDLS 120

Query: 121 VSHEADTGGSEGD 134
                DT GS  D
Sbjct: 121 TEVYIDTHGSTSD 125

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL
Match: A0A0A0KQH0 (Yippee domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G201320 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 3.3e-58
Identity = 115/135 (85.19%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALYDDIISK   ++   +      L + + VNVCLGK
Sbjct: 74  MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKSFHSRHGKA-----YLFNKV-VNVCLGK 133

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 134 IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 193

Query: 121 VSHEADTGGSEGDDV 136
           VSHEADTGGSEGDDV
Sbjct: 194 VSHEADTGGSEGDDV 202

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL
Match: A0A1S4E425 (Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103501434 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.9e-56
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALY+DIISK   ++   +      L + + VNVCLGK
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYEDIISKSFHSRHGKA-----YLFNKV-VNVCLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120

Query: 121 -VSHEADTGGSEGDDV 136
            VSHEAD GGSEGDDV
Sbjct: 121 GVSHEADAGGSEGDDV 130

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL
Match: A0A5D3BCE7 (Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00070 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.9e-56
Identity = 113/136 (83.09%), Postives = 119/136 (87.50%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCKFCRTHLALY+DIISK   ++   +      L + + VNVCLGK
Sbjct: 1   MGRLFVVNLEGQIYSCKFCRTHLALYEDIISKSFHSRHGKA-----YLFNKV-VNVCLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW
Sbjct: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120

Query: 121 -VSHEADTGGSEGDDV 136
            VSHEAD GGSEGDDV
Sbjct: 121 GVSHEADAGGSEGDDV 130

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL
Match: A0A6J1DRW0 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111023736 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 7.5e-47
Identity = 101/135 (74.81%), Postives = 109/135 (80.74%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCK+C THLALYDDIISK    K   +      L + + VNV  GK
Sbjct: 1   MGRLFVVNLEGQIYSCKYCGTHLALYDDIISKSFHCKHGKA-----YLFNKV-VNVSSGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IE+RLMMTGMHTVADIFCVGCGS+VGWKYETAHEKNQKYKEGKSVLERFKV  PDESS+ 
Sbjct: 61  IEDRLMMTGMHTVADIFCVGCGSIVGWKYETAHEKNQKYKEGKSVLERFKVSVPDESSYL 120

Query: 121 VSHEADTGGSEGDDV 136
            S EAD GGS+ DDV
Sbjct: 121 ASQEADGGGSDEDDV 129

[Close]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL
Match: A0A6J1GXX2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111458348 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 3.7e-46
Identity = 100/136 (73.53%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFVVNLEGQIYSCK+CRTHLALY DIISK    +   +      L + + VNV LGK
Sbjct: 1   MGRLFVVNLEGQIYSCKYCRTHLALYHDIISKSFHCRHGKA-----YLFNKV-VNVWLGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
           IEERLMMTGMHTVAD+FCVGCGS+VGWKYETAHEK+QKYKEGK VLER KV+G DES  W
Sbjct: 61  IEERLMMTGMHTVADLFCVGCGSIVGWKYETAHEKSQKYKEGKFVLERVKVVGADESRLW 120

Query: 121 VSHEADTGGS-EGDDV 136
            SHEAD GGS EG+DV
Sbjct: 121 GSHEADAGGSEEGEDV 130

[Close]

BLAST of CsaV3_5G009020 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 181.0 bits (458), Expect = 6.3e-46
Identity = 93/136 (68.38%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRV-NVCLG 60
           MGRLFVVNLEG+IYSCK C+THLA Y+DIISK    K        GK     +V NV +G
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKH-------GKAYLFNKVANVSIG 60

Query: 61  KIEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSH 120
           + EERLMMTG HTVADIFCV CGS+VGWKYETAHEKNQKYKEGKSVLERFK+ GPD S++
Sbjct: 61  ETEERLMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDGSNY 120

Query: 121 WV-SHEADTGGSEGDD 135
           WV SH    GGS+ DD
Sbjct: 121 WVSSHGRHIGGSDADD 129

[Close]

BLAST of CsaV3_5G009020 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLF+VNLEG+ YSCK C+T+LAL DD++SK   ++   +      L S + VNV  GK
Sbjct: 1   MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKA-----YLFSKV-VNVYAGK 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E+R+MMTGMHTV DI+CV CGS VGWKYE A EKNQKYKEGKSVLER+KV GPD +++W
Sbjct: 61  KEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYW 120

Query: 121 VSHEADTGGSEGDD 135
           V+ E + G S+ DD
Sbjct: 121 VAQEVEAGDSDTDD 128

[Close]

BLAST of CsaV3_5G009020 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.7e-41
Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLF+VNLEG+ YSCK C+T+LAL DD++SK   ++   +      L S + VNV  GK
Sbjct: 34  MGRLFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKA-----YLFSKV-VNVYAGK 93

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E+R+MMTGMHTV DI+CV CGS VGWKYE A EKNQKYKEGKSVLER+KV GPD +++W
Sbjct: 94  KEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDGNNYW 153

Query: 121 VSHEADTGGSEGDD 135
           V+ E + G S+ DD
Sbjct: 154 VAQEVEAGDSDTDD 161

[Close]

BLAST of CsaV3_5G009020 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 155.6 bits (392), Expect = 2.8e-38
Identity = 79/110 (71.82%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRV-NVCLG 60
           MGRLFVVNLEG+IYSCK C+THLA Y+DIISK    K        GK     +V NV +G
Sbjct: 1   MGRLFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKH-------GKAYLFNKVANVSIG 60

Query: 61  KIEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERF 110
           + EERLMMTG HTVADIFCV CGS+VGWKYETAHEKNQKYKEGKSVLERF
Sbjct: 61  ETEERLMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERF 103

[Close]

BLAST of CsaV3_5G009020 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34
Identity = 71/134 (52.99%), Postives = 95/134 (70.90%), Query Frame = 0


Query: 1   MGRLFVVNLEGQIYSCKFCRTHLALYDDIISKELGNKRSPSTADMGKLTSSIRVNVCLGK 60
           MGRLFV++LEG +YSCK+C+TH A+ +DIISK    K          L  ++ VNV +G+
Sbjct: 1   MGRLFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHG-----RAYLFDNV-VNVTVGE 60

Query: 61  IEERLMMTGMHTVADIFCVGCGSMVGWKYETAHEKNQKYKEGKSVLERFKVLGPDESSHW 120
            E R+M+TG HTVADIFCV CGS+VGWKYE A++K+QKYKEGK +LERFKVLGP    + 
Sbjct: 61  KEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVLGPYGGGYD 120

Query: 121 VSHEADTGGSEGDD 135
           ++      GS+ ++
Sbjct: 121 MNQNEPMTGSDDEE 128

The following BLAST results are available for this feature:

BLAST of CsaV3_5G009020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740894.1	1.3e-72	100.00	protein yippee-like isoform X2 [Cucumis sativus] >KAE8648019.1 hypothetical prot...	[more]
XP_031740893.1	1.8e-58	71.26	protein yippee-like isoform X1 [Cucumis sativus]	[more]
XP_004149238.1	6.7e-58	85.19	protein yippee-like isoform X3 [Cucumis sativus]	[more]
XP_008463228.1	1.8e-55	83.09	PREDICTED: protein yippee-like [Cucumis melo] >XP_016902985.1 PREDICTED: protein...	[more]
XP_038893239.1	6.5e-53	81.16	protein yippee-like isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_5G009020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59234	2.9e-43	64.44	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9C777	3.9e-40	60.45	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9SR97	1.6e-33	52.99	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9LY56	1.0e-32	55.56	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]
Q9FN32	1.9e-31	52.63	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]

BLAST of CsaV3_5G009020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQH0	3.3e-58	85.19	Yippee domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G201320 PE=3...	[more]
A0A1S4E425	8.9e-56	83.09	Protein yippee-like OS=Cucumis melo OX=3656 GN=LOC103501434 PE=3 SV=1	[more]
A0A5D3BCE7	8.9e-56	83.09	Protein yippee-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G0...	[more]
A0A6J1DRW0	7.5e-47	74.81	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111023736 PE=3 SV=1	[more]
A0A6J1GXX2	3.7e-46	73.53	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111458348 PE=3 SV=1	[more]

BLAST of CsaV3_5G009020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40110.1	6.3e-46	68.38	Yippee family putative zinc-binding protein	[more]
AT3G11230.1	2.7e-41	60.45	Yippee family putative zinc-binding protein	[more]
AT3G11230.2	2.7e-41	60.45	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	2.8e-38	71.82	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	1.1e-34	52.99	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 13..110 e-value: 1.9E-13 score: 50.5
None	No IPR available	PANTHER	PTHR13848:SF67	PROTEIN YIPPEE-LIKE	coord: 1..135
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 1..135
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 12..115 score: 38.685566

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G009020.1	CsaV3_5G009020.1	mRNA