CsaV3_5G008780 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G008780
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	17.8 kDa class I heat shock protein-like
Location	chr5: 5443251 .. 5444088 (+)
RNA-Seq Expression	CsaV3_5G008780
Synteny	CsaV3_5G008780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTCATATATTTCACTCAGCCATTCACATTTACCCACTCTTTTCACAGCCAATCTTTCAAAGAAACCAACAACACCATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAAAGCTCTCTGTGTTTGTGTGTTTTGTCCAATCTGATCTTATGGTTGAAAGTGTCGTTTGGTTCTTTAGTAATGAAATAAAAAGGCATGTCGTCCCTTTCAGTAATTATGGTTGTGTAGCTAATTATGAGGTAAATATATTGTATTTTAAAGCTTCAAGTTCAAACTGTTTGATGTAAAATTCTTTGGAAAAGAAAAAGAAGAAAGTATATATTAATATTATGTTTACAAATGGCATATCTCATCTCCTCTTTTGTGTTGTGAGTTCGGACTTCGAAGAGTATAATATCTT

mRNA sequence

ATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA

Coding sequence (CDS)

ATGTCACTCATTCCAAGCTTTTTCGGTGGTCGCCGCACCAACGTCTTCGACCCCTTTTCATTAGACGCATGGGATCCATTCCAAGGCTTCTCATTCTCTAATTCACTGTCTAATCTTCCTTCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACCCCACAAGCCCACATCTTCACAGCCGATCTTCCTGGAATCAACAAACAAGAAGTCAAAGTTGAGGTTCAAGAAGGCAGGGTTCTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAAGAGAAGAACGACAAATGGCATAGGATTGAACGAAGCAGTGGGCAGTTCGTGAGGAGATTCAGGCTGCCTGAGAATGCCAAAGTTGATGAGGTGAAAGCCAGTATGGAGAATGGAGTTCTCACGGTGACAGTGCCTAAAGTGGAAGAGAAGAAGCCTGAAATAATTAAATCAATTGAAATCACTGATCACTAA

Protein sequence

MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH*

Homology

[Close]

BLAST of CsaV3_5G008780 vs. NCBI nr
Match: XP_004150236.3 (17.3 kDa class I heat shock protein [Cucumis sativus] >KAE8648013.1 hypothetical protein Csa_021403 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 8.5e-81
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
           TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK
Sbjct: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 157
           VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH
Sbjct: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 156

[Close]

BLAST of CsaV3_5G008780 vs. NCBI nr
Match: XP_011654976.2 (17.8 kDa class I heat shock protein [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGRRTNVFDPFSLD WDPFQGF FSNSL NLPS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAH+FTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQF+RRFRL
Sbjct: 61  QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPE-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. NCBI nr
Match: KAE8648011.1 (hypothetical protein Csa_021429 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-73
Identity = 147/159 (92.45%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGRRTNVFDPFSLD WDPFQGF FSNSL NLPS     SAFANTRIDWKETP
Sbjct: 64  MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 123

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAH+FTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQF+RRFRL
Sbjct: 124 QAHVFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 183

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE IKSIEI+
Sbjct: 184 PENAKVDEVKASMENGVLTVTVPKVEEKKPE-IKSIEIS 221

[Close]

BLAST of CsaV3_5G008780 vs. NCBI nr
Match: XP_038892388.1 (17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17.8 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69
Identity = 137/159 (86.16%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGR++N+FDPFSLD WDPF GFSFSNSL+N+PS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRKSNIFDPFSLDVWDPFDGFSFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
            AHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  HAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKV+EVKASMENG+LTVTVPKVE+KKP+ IKSIEI+
Sbjct: 121 PENAKVEEVKASMENGLLTVTVPKVEQKKPD-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. NCBI nr
Match: XP_008464642.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0066886.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK28033.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 270.4 bits (690), Expect = 9.8e-69
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSA-----FANTRIDWKETP 60
           MSLIPSFF GRR+N FDPFSLD WDPFQGF FSNSL+N PSSA     FANTRIDWKETP
Sbjct: 1   MSLIPSFFRGRRSNDFDPFSLDVWDPFQGFPFSNSLANFPSSARETSTFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVL VTVPK+EEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLMVTVPKMEEKKPE-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 3.9e-60
Identity = 112/157 (71.34%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSLIPS FGGRRTNVFDPFSLD +DPF+GF   + L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVEV++G +LQISGERS E EEKNDKWHR+ERSSG+F RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAK++E+KASMENGVL+VTVPKV EKKPE +KSI+I+
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPE-VKSIDIS 156

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.1e-60
Identity = 114/157 (72.61%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSN---LPSSAFANTRIDWKETPQA 60
           MS+IPSFFGGRR+NVFDPFSLD WDPF+ F    S ++     ++AF NT IDWKETPQA
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVE++EG+VLQISGER+KE+EEKNDKWHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKVDEVKA+M NGV+TVTVPKVE KKPE +K+I+I+
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPE-VKAIDIS 156

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot
Match: P02519 (17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.5e-59
Identity = 112/154 (72.73%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRR++VFDPFSLD WDPF+ F F +SLS   +SAF +TR+DWKETP+AH+F
Sbjct: 1   MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLS-AENSAFVSTRVDWKETPEAHVF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
            AD+PG+ K+EVK+E+Q+GRVLQISGER+ E+E+KND WHR+ERSSG+ VRRFRLPENAK
Sbjct: 61  KADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           VD+VKASMENGVLTVTVPK E KKP+ +K+I+I+
Sbjct: 121 VDQVKASMENGVLTVTVPKEEIKKPD-VKAIDIS 152

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-59
Identity = 113/158 (71.52%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSL--SNLP--SSAFANTRIDWKETPQ 60
           MSLIPSFFGGRR+NVFDPFSLD WDPF+ F F+NS   ++ P  +SAF +TR+DWKETP+
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  AHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLP 120
           AH+F ADLPG+ K+EVKVE+++ RVLQISGERS E+E+KND+WHR+ERSSG+F+RRFRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLP 120

Query: 121 ENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           ENAK+D+VKA+MENGVLTVTVPK E KKPE +K+I+I+
Sbjct: 121 ENAKMDQVKAAMENGVLTVTVPKEEVKKPE-VKTIDIS 157

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-59
Identity = 110/157 (70.06%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSL+PSFFGGRRTNVFDPFSLD WDPF+GF  +  L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F AD+PG+ K+EVKVEV++G +LQISGERS E EEK+D WHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKV+EVKASMENGVL+VTVPKV+E KPE +KS++I+
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPE-VKSVDIS 155

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL
Match: A0A0A0KQF0 (Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5G198120 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.6e-80
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60
           MSLIPSFFGGRRT+VFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF
Sbjct: 1   MSLIPSFFGGRRTHVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHIF 60

Query: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120
           TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK
Sbjct: 61  TADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENAK 120

Query: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 157
           VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH
Sbjct: 121 VDEVKASMENGVLTVTVPKVEEKKPEIIKSIEITDH 156

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL
Match: A0A0A0KP10 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73
Identity = 148/159 (93.08%), Postives = 150/159 (94.34%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           MSLIPSFFGGRRTNVFDPFSLD WDPFQGF FSNSL NLPS     SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRTNVFDPFSLDVWDPFQGFPFSNSLPNLPSSAPETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQF+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVLTVTVPKVEEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPE-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL
Match: A0A5A7VKE4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G002830 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.7e-69
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSA-----FANTRIDWKETP 60
           MSLIPSFF GRR+N FDPFSLD WDPFQGF FSNSL+N PSSA     FANTRIDWKETP
Sbjct: 1   MSLIPSFFRGRRSNDFDPFSLDVWDPFQGFPFSNSLANFPSSARETSTFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVL VTVPK+EEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLMVTVPKMEEKKPE-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL
Match: A0A1S3CLZ4 (17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103502478 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.7e-69
Identity = 140/159 (88.05%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSA-----FANTRIDWKETP 60
           MSLIPSFF GRR+N FDPFSLD WDPFQGF FSNSL+N PSSA     FANTRIDWKETP
Sbjct: 1   MSLIPSFFRGRRSNDFDPFSLDVWDPFQGFPFSNSLANFPSSARETSTFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIFTADLPGINKQEVKVEV+EGRVLQISGERSKEQEEKNDKWHRIERSSG+F+RRFRL
Sbjct: 61  QAHIFTADLPGINKQEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKVDEVKASMENGVL VTVPK+EEKKPE IKSIEI+
Sbjct: 121 PENAKVDEVKASMENGVLMVTVPKMEEKKPE-IKSIEIS 158

[Close]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 135/159 (84.91%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS-----SAFANTRIDWKETP 60
           M+LIP+ FGGRR+NVFDPFSLD WDPF+GF FSNSL+NLPS     SAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           QAHIF ADLPGINK+EVKVEV+EGRVLQISGERSKEQEEKNDKWHR+ERSSG+F+RRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAKV+EVKASMENGVLTVTVPK+EEKKPE IKSI+I+
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPE-IKSIDIS 158

[Close]

BLAST of CsaV3_5G008780 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-61
Identity = 112/157 (71.34%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSLIPS FGGRRTNVFDPFSLD +DPF+GF   + L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F ADLPG+ K+EVKVEV++G +LQISGERS E EEKNDKWHR+ERSSG+F RRFRLPE
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAK++E+KASMENGVL+VTVPKV EKKPE +KSI+I+
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPE-VKSIDIS 156

[Close]

BLAST of CsaV3_5G008780 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 229.9 bits (585), Expect = 1.4e-60
Identity = 110/157 (70.06%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPS---SAFANTRIDWKETPQA 60
           MSL+PSFFGGRRTNVFDPFSLD WDPF+GF  +  L+N P+   +AF N ++DW+ETP+A
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAPAKDVAAFTNAKVDWRETPEA 60

Query: 61  HIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPE 120
           H+F AD+PG+ K+EVKVEV++G +LQISGERS E EEK+D WHR+ERSSG+F+RRFRLPE
Sbjct: 61  HVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPE 120

Query: 121 NAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           NAKV+EVKASMENGVL+VTVPKV+E KPE +KS++I+
Sbjct: 121 NAKVEEVKASMENGVLSVTVPKVQESKPE-VKSVDIS 155

[Close]

BLAST of CsaV3_5G008780 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 223.4 bits (568), Expect = 1.3e-58
Identity = 111/159 (69.81%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MSLIPSFFGGRRTNVFDPFSLDAWDPFQG-FSFSNSLSNLPS----SAFANTRIDWKETP 60
           MSLIPS FGGRR+NVFDPFS D WDPF+G F+ S++L+N  +    +AF N R+DWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  QAHIFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRL 120
           +AH+F ADLPG+ K+EVKVEV++  VLQISGERSKE EEKNDKWHR+ER+SG+F+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PENAKVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           PENAK++EVKA+MENGVLTV VPK  EKKP+ +KSI+I+
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQ-VKSIDIS 158

[Close]

BLAST of CsaV3_5G008780 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 6.1e-53
Identity = 103/155 (66.45%), Postives = 129/155 (83.23%), Query Frame = 0


Query: 1   MSLIPSFF-GGRRTNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAHI 60
           MS+IPSFF   RR+N+FDPFSLD WDPF+  + S+SLS   +SA  N R+DW+ETP+AH+
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-SSSLSR-ENSAIVNARVDWRETPEAHV 60

Query: 61  FTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPENA 120
           F ADLPG+ K+EVKVE++E  VL+ISGER  E+E+KND WHR+ERSSGQF RRFRLPEN 
Sbjct: 61  FKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENV 120

Query: 121 KVDEVKASMENGVLTVTVPKVEEKKPEIIKSIEIT 155
           K+D+VKA+MENGVLTVTVPK E KK + +KSI+I+
Sbjct: 121 KMDQVKAAMENGVLTVTVPKAETKKAD-VKSIQIS 152

[Close]

BLAST of CsaV3_5G008780 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-52
Identity = 103/157 (65.61%), Postives = 126/157 (80.25%), Query Frame = 0


Query: 1   MSLIPSFFGGRR--TNVFDPFSLDAWDPFQGFSFSNSLSNLPSSAFANTRIDWKETPQAH 60
           MSLIPSFFG  R   ++FDPFSLD WDPF+   F +SLS   +SA  N R+DWKET +AH
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG-ETSAITNARVDWKETAEAH 60

Query: 61  IFTADLPGINKQEVKVEVQEGRVLQISGERSKEQEEKNDKWHRIERSSGQFVRRFRLPEN 120
           +F ADLPG+ K+EVKVE+++  VL+ISGER  E+EEK D WHR+ERSSGQF R+F+LPEN
Sbjct: 61  VFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPEN 120

Query: 121 AKVDEVKASMENGVLTVTVPKVEE-KKPEIIKSIEIT 155
            K+D+VKASMENGVLTVTVPKVEE KK   +KSI+I+
Sbjct: 121 VKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156

The following BLAST results are available for this feature:

BLAST of CsaV3_5G008780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150236.3	8.5e-81	100.00	17.3 kDa class I heat shock protein [Cucumis sativus] >KAE8648013.1 hypothetical...	[more]
XP_011654976.2	6.5e-73	92.45	17.8 kDa class I heat shock protein [Cucumis sativus]	[more]
KAE8648011.1	6.5e-73	92.45	hypothetical protein Csa_021429 [Cucumis sativus]	[more]
XP_038892388.1	4.4e-69	86.16	17.8 kDa class I heat shock protein-like [Benincasa hispida] >XP_038892768.1 17....	[more]
XP_008464642.1	9.8e-69	88.05	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0066886.1...	[more]

BLAST of CsaV3_5G008780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P13853	3.9e-60	71.34	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27396	5.1e-60	72.61	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P02519	1.5e-59	72.73	17.3 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.3-B PE=3 SV=...	[more]
P27880	1.9e-59	71.52	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19036	1.9e-59	70.06	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]

BLAST of CsaV3_5G008780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQF0	1.6e-80	99.36	Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5...	[more]
A0A0A0KP10	2.4e-73	93.08	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G190530 PE=3 S...	[more]
A0A5A7VKE4	4.7e-69	88.05	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CLZ4	4.7e-69	88.05	17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103502478...	[more]
A0A5A7UAZ9	4.0e-68	84.91	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CsaV3_5G008780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	2.7e-61	71.34	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.4e-60	70.06	heat shock protein 17.4	[more]
AT5G59720.1	1.3e-58	69.81	heat shock protein 18.2	[more]
AT2G29500.1	6.1e-53	66.45	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.0e-52	65.61	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 10..154 e-value: 1.8E-48 score: 166.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 17..149
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 1.3E-29 score: 102.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 30.699011
None	No IPR available	PANTHER	PTHR11527:SF336	SUBFAMILY NOT NAMED	coord: 2..154
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 48..139 e-value: 1.35212E-55 score: 167.867
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 2..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G008780.1	CsaV3_5G008780.1	mRNA