CsaV3_5G008690 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G008690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	17.8 kDa class I heat shock protein-like
Location	chr5: 5349881 .. 5350786 (+)
RNA-Seq Expression	CsaV3_5G008690
Synteny	CsaV3_5G008690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTGGAGTCATCTTCTTCACCAACAAGAAATTGTTTTTCTGGAAATCTCTAAGCTATCGTCTTCCCTCCTATTTAAATGTTTCATTCTTCCCGGTGGAAGCTAACCTTAGCAGCAGCAAACAATACCAACATTACCAGCAACTCCATAGACAACAAATTCCATTTCTATTCTCTCTTATTTCTCTGTTTCTTAACCAATATCTTCTGCTTTAAATTTCAACCTCCATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAATTTCATGATTAAAACTCTAATATTGTATATAAAACTGTAATATGGTATATAACAATAATTGTGTTTCTCTCACTCTTTTAATCTTAATTTTGTTTTTTTTTATGGAAATAATAAACAACTTAAAAGAATGTGAGAGGATCAATTTCTAGATCCTATCAAAAATTATAATTTTATTTAATGAGTCTAATAAAATAATAAACTTCTATTACATTCAAAATAG

mRNA sequence

ATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAA

Coding sequence (CDS)

ATGTCTCTGATTCCAAGCATTTTCGGTGGTCGCCGGAGCAACGTCTTCGACCCCTTTTCATTGAACATTTGGGATCCATTTGAAGGCTTGCCATTTTCGAACTCATTGGCCAATGTCCCCTCTTCTGCTCGTGAAACCTCTGCTTTTGCCAACACTCGGATTGATTGGAAAGAAACCCCACAAGCCCACATCTTCAAGGCGGATCTTCCCGGAATCAAGAAGGAAGAAGTCAAAGTAGAGGTGGAAGAAGGCAGAGTTCTGCAAATCAGTGGAGAGAGGAGCAAAGAGCAGGAGGAGAAGAACGAAAAATGGCATAGGATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGGTTCAGGTTGCCTAAGAATGCAAAAGTGGAGGAGGTGAAGGCCAACATGGAGAATGGAGTTCTGACTGTGACAGTTCCTAAACTGGAGAAGAACCCTTGTAAACTTTAA

Protein sequence

MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPKNAKVEEVKANMENGVLTVTVPKLEKNPCKL*

Homology

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BLAST of CsaV3_5G008690 vs. NCBI nr
Match: XP_004151581.1 (17.8 kDa class I heat shock protein [Cucumis sativus] >KGN50611.1 hypothetical protein Csa_021397 [Cucumis sativus])

HSP 1 Score: 302.4 bits (773), Expect = 2.3e-78
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 153
           PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL
Sbjct: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 152

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BLAST of CsaV3_5G008690 vs. NCBI nr
Match: XP_038892901.1 (18.1 kDa class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 136/147 (92.52%), Postives = 146/147 (99.32%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSL+IWDPFEG PFS+SLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSSSLANIPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHR+ERSSGKFMRRFRL
Sbjct: 61  EAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEE 147

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BLAST of CsaV3_5G008690 vs. NCBI nr
Match: XP_008463198.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYJ97577.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 138/147 (93.88%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSL+IWDPFEG  FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEE 147

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BLAST of CsaV3_5G008690 vs. NCBI nr
Match: XP_008463195.1 (PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0037317.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK24112.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-70
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSI G RRSNVFDPFS NIWDPFEGLPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSILGDRRSNVFDPFSFNIWDPFEGLPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRR RL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRLRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKVEEVKANMENGVLTVTVPK+E
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKME 146

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BLAST of CsaV3_5G008690 vs. NCBI nr
Match: XP_008465538.1 (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa] >TYK22768.1 17.6 kDa class I heat shock protein 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70
Identity = 138/147 (93.88%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSL+IWDPFEG PFSNSLANVPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEE 147

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BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-58
Identity = 116/151 (76.82%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEG-LPFSNSLANVPSSARETSAFANTRIDWKET 60
           MSLIPSIFGGRRSNVFDPFS ++WDPFEG    S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           LP+NAK+EEVKA MENGVLTV VPK  EK P
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKP 150

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BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-58
Identity = 110/146 (75.34%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MS+IPS FGGRRSNVFDPFSL++WDPF+  P   S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVE+EEG+VLQISGER+KE+EEKN+KWHR+ERSSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKV+EVKA M NGV+TVTVPK+E
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVE 144

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BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-58
Identity = 110/146 (75.34%), Postives = 131/146 (89.73%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPS FGGRRSNVFDPFSL++WDPF+  PF+NS  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG+KKEEVKVE+E+ RVLQISGERS E+E+KN++WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAK+++VKA MENGVLTVTVPK E
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEE 145

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BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot
Match: P05478 (18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.7e-58
Identity = 107/148 (72.30%), Postives = 133/148 (89.86%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSL--ANVPSSARETSAFANTRIDWKE 60
           MSLIP+ FGGRR+NVFDPFSL++WDPF+  PF N+L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRF 120
           TP+AH+FKAD+PG+KKEEVKV++E+ +VLQISGER+ E+E+KN+ WHR+ERSSGKFMRRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 121 RLPKNAKVEEVKANMENGVLTVTVPKLE 147
           RLP+NAKVE+VKA+MENGVLTVTVPK E
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEE 148

[Close]

BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot
Match: P27397 (18.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 109/146 (74.66%), Postives = 125/146 (85.62%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MS+IPS FG RRSNV +PFSL+IWDPF+  P   S        +ET+AFANT IDWKETP
Sbjct: 1   MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAH+FKADLPG+KKEEVKVEVEEG+VLQISGER+KE+EEKN KWHR+E SSGKF+RRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NA V+EVKA MENGVLTVTVPK+E
Sbjct: 121 PENANVDEVKAGMENGVLTVTVPKVE 146

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BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL
Match: A0A0A0KSB4 (Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5G190550 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-78
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 153
           PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL
Sbjct: 121 PKNAKVEEVKANMENGVLTVTVPKLEKNPCKL 152

[Close]

BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.4e-71
Identity = 138/147 (93.88%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSL+IWDPFEG  FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEE 147

[Close]

BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.4e-71
Identity = 138/147 (93.88%), Postives = 145/147 (98.64%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           M+LIPSIFGGRRSNVFDPFSL+IWDPFEG  FSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEK 148
           P+NAKVEEVKANMENGVLTVTVPK+E+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEE 147

[Close]

BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL
Match: A0A5A7T6Y2 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00070 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSI G RRSNVFDPFS NIWDPFEGLPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSILGDRRSNVFDPFSFNIWDPFEGLPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRR RL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRLRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKVEEVKANMENGVLTVTVPK+E
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKME 146

[Close]

BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL
Match: A0A1S3CK75 (17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501405 PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSI G RRSNVFDPFS NIWDPFEGLPFSNSLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MSLIPSILGDRRSNVFDPFSFNIWDPFEGLPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRR RL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRLRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLE 147
           P+NAKVEEVKANMENGVLTVTVPK+E
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKME 146

[Close]

BLAST of CsaV3_5G008690 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 226.9 bits (577), Expect = 1.1e-59
Identity = 116/151 (76.82%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEG-LPFSNSLANVPSSARETSAFANTRIDWKET 60
           MSLIPSIFGGRRSNVFDPFS ++WDPFEG    S++LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           LP+NAK+EEVKA MENGVLTV VPK  EK P
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKP 150

[Close]

BLAST of CsaV3_5G008690 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 2.1e-58
Identity = 108/150 (72.00%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSLIPSIFGGRR+NVFDPFSL+++DPFEG    + LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKL-EKNP 150
           P+NAK+EE+KA+MENGVL+VTVPK+ EK P
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKP 148

[Close]

BLAST of CsaV3_5G008690 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57
Identity = 104/148 (70.27%), Postives = 131/148 (88.51%), Query Frame = 0


Query: 1   MSLIPSIFGGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKETP 60
           MSL+PS FGGRR+NVFDPFSL++WDPFEG   +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK++ WHR+ERSSGKFMRRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 121 PKNAKVEEVKANMENGVLTVTVPKLEKN 149
           P+NAKVEEVKA+MENGVL+VTVPK++++
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQES 145

[Close]

BLAST of CsaV3_5G008690 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 8.1e-50
Identity = 97/147 (65.99%), Postives = 119/147 (80.95%), Query Frame = 0


Query: 1   MSLIPSIF-GGRRSNVFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKET 60
           MS+IPS F   RRSN+FDPFSL++WDPF+ L  S       S +RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS-------SLSRENSAIVNARVDWRET 60

Query: 61  PQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KN+ WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 121 LPKNAKVEEVKANMENGVLTVTVPKLE 147
           LP+N K+++VKA MENGVLTVTVPK E
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAE 140

[Close]

BLAST of CsaV3_5G008690 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 3.1e-49
Identity = 97/149 (65.10%), Postives = 123/149 (82.55%), Query Frame = 0


Query: 1   MSLIPSIFG-GRRSN-VFDPFSLNIWDPFEGLPFSNSLANVPSSARETSAFANTRIDWKE 60
           MSLIPS FG  RRSN +FDPFSL++WDPF+ L F +SL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 61  TPQAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRF 120
           T +AH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK + WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 121 RLPKNAKVEEVKANMENGVLTVTVPKLEK 148
           +LP+N K+++VKA+MENGVLTVTVPK+E+
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEE 143

The following BLAST results are available for this feature:

BLAST of CsaV3_5G008690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151581.1	2.3e-78	100.00	17.8 kDa class I heat shock protein [Cucumis sativus] >KGN50611.1 hypothetical p...	[more]
XP_038892901.1	1.3e-70	92.52	18.1 kDa class I heat shock protein-like [Benincasa hispida]	[more]
XP_008463198.1	1.7e-70	93.88	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0037330.1...	[more]
XP_008463195.1	2.3e-70	95.21	PREDICTED: 17.8 kDa class I heat shock protein-like [Cucumis melo] >KAA0037317.1...	[more]
XP_008465538.1	3.0e-70	93.88	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo] >KAA0051493...	[more]

BLAST of CsaV3_5G008690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	1.6e-58	76.82	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P27396	1.6e-58	75.34	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P27880	2.7e-58	75.34	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P05478	2.7e-58	72.30	18.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP18.5-C PE=3 SV=...	[more]
P27397	1.3e-57	74.66	18.0 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of CsaV3_5G008690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSB4	1.1e-78	100.00	Chloroplast small heat shock protein class I OS=Cucumis sativus OX=3659 GN=Csa_5...	[more]
A0A5D3BEM2	8.4e-71	93.88	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	8.4e-71	93.88	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]
A0A5A7T6Y2	1.1e-70	95.21	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CK75	1.1e-70	95.21	17.8 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501405...	[more]

BLAST of CsaV3_5G008690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.1e-59	76.82	heat shock protein 18.2	[more]
AT1G53540.1	2.1e-58	72.00	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.1e-57	70.27	heat shock protein 17.4	[more]
AT2G29500.1	8.1e-50	65.99	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.1e-49	65.10	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..151 e-value: 1.8E-49 score: 169.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 31..149
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 55..148 e-value: 3.7E-29 score: 100.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 45..152 score: 29.269043
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..148
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 53..144 e-value: 2.36663E-47 score: 146.681
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G008690.1	CsaV3_5G008690.1	mRNA