CsaV3_5G008590 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G008590
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr5: 5287628 .. 5292514 (+)
RNA-Seq Expression	CsaV3_5G008590
Synteny	CsaV3_5G008590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCATGGCGGTTGAGCATTCAACAACTTGGAATGTTACAACGCTTCCCTCGAGCGTTCTTCCGTCTCGCGAGTCCTTTACTTCAAATGGGGCACCGGATGTCTTATTCCACATATGCTTCACATCCCCCACTCTCCGACCTCCATCAAACCATGCCCTCAGTACAGTTTATTTCGTTACCTTTGTGCTGTTATCTCATGGGACTTTTTAGGAACATTGATACTCTTATCAAGTTCCATGGGTTGCTTATAGTACACGGCCTTATCGGTAATCTTCTTTGTGATACCAAGTTGGTTGGTGTTTATGGCGCACTTGGGGATGTGAGGTCTGCTCGAATGGTGTTCGATCAAATGCCCAACCCCGATTTTTATGCGTGGAAGGTGATGATCAGGTGGTATTTTTTGAATGACTTGTTTGTGGATGTTATCCCATTCTATAATCGCATGAGAATGTCTTTTAGGGAATGCGATAACATAATTTTTTCTATTATTTTGAAAGCCTGTAGCGAATTGCGTGAAATTGTTGAAGGCAGAAAGGTCCATTGTCAGATTGTGAAGGTGGGGGGTCCGGATAGCTTTGTAATGACTGGTTTGATAGATATGTATGGTAAATGTGGGCAGGTTGAGTGCTCAAGTGCTGTGTTTGAAGAAATCATGGATAAAAATGTGGTTTCATGGACTTCAATGATTGCGGGATATGTACAAAATAATTGTGCGGAGGAGGGTCTGGTTTTATTCAATCGGATGAGAGATGCATTGGTTGAAAGCAACCCATTTACTTTAGGAAGCATAATAAATGCGTGTACAAAATTAAGAGCTTTACATCAAGGAAAATGGGTGCATGGCTATGCCATTAAGAACATTGCTGAACTTAGCTCTTTCTTGGCGACTACTTTTTTGGACATGTATGTTAAATGTGGGCAAACTAGAGATGCTCGCATGATATATGACGAACTACCTACTATTGATCTTGTTTCATGGACTGCAATGATAGTTGGATATACCCAAGCTAGGCAACCCAACGATGGATTGAGGCTTTTTGCTGATGAAATAAGGTCAGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTTTCAGCATGTTCGGTTTCTGGTAATTTGAATTTAGGAATGTCAGTTCATGGACTTGGGATTAAAATTGGGCTGGAAGAATGTGTGGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATAAGATTGGTGATGCTTATGCTATATTTCATGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCTATGATATCTGGGTATGCTCAAAATGGATCTGCTTATGATGCCCTCCGTCTCTTTAATCAAATGAGATCATACTCCCTTGCACCTGATGCAATAACGCTTGTGAGCACTCTTTCAGCATCTGCCACTCTTGGTGCTATACAGGTTGGTTCATCACTTCATGCTTATTCGGTTAAAGGAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGCGGTGATGCAAGATCAGCACGAATGGTGTTCGATAGTATGGGAGTTAAGAATATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGGTGATGGAAGCGGATCCCTTTCTATTTTCTCTAACATGTTGAAGGAGGATTTGAAACCGAATGAAGTAATTTTTACGACAGTATTATCTGCTTGTAGCTATTCGGGAATGGTTGAAGAGGGATGGAGGTATTTCAAATCCATGATTCAGGATTATAACTTTGTTCCTTCCATGAAACATTATGCATGTATGGTTGATCTCTTAGCTCGATCAGGTAAACTGGATGAAGCATTAGACTTCATTAAGAAAATGCCAGTTCAACCAGACGTTAGTTTGTATGGAGCTTTCCTTCATGGATGTGGATTATACTCGAGGTTTGATCTCGGAGAAGTCGTAGTCAGGGAAATGCTACAGCTACATCGAAATGAAGCTTGCTATTATGTGCTCGTATCTAACCTTTATGCTTCAGATGGGAAATGGGGTCAAGTTAATGAGGTGAGAGATTTGATGCTTCAGAGAGGTCTGAACAAAGTCCCGGGGTATAGCCTTGTAGAAACTAATGCAGGTGTGCTATTTCATTAGCTGAAGCCACTTGTGTGGCTCATGTCTTCATGTTCTCGTTGAGATAGTAAAAAAAACCTTGAAGTTCTGAAATACTGATTTGTGGAATTTTCTTACTACCCTTGACCACTCCTTTGATGGAGTTCTGACGAGCCTTATCCAATAGGGAAATGTCAGATGTTGTTGATCATCTAACTTTACTTGGAGAACTTCGGTGTGTGGAGCCTATTCTAAGTTTGGCCAATACTACAAGAAATGGGTCATTTAATAGCCTTTGAGGATTACCATTTTAAATTGGGCTATCATTGGAAAGGAAAAAAAAAGTGGGAAATAGAAAATTATCCCGCTCAATATTTCTCACTCTTTGGAGAACGTTTCACGCTTTCATCTTTTTTTGCTCAAGAGACGATTGTCGTTGCATGCTTTCATCTCTATTGAACGTTTCATGCTTGCGATACCCACCCATGTCCCGTCTCACACGACTGCCCTCCATTCAACCAACGACGATGTCGTCGTTGTCTCTATCCAATCCCCAATGCTGAAGCTCTAGCATCGTCATCGTCATCGTCTACAAGGCAACACATGTTGGATCTGACAGTAAGTGGGTTACATCTATTAATTTACAACTTTTCAATTATACGGTACGGAAAGATAAACTGCCATACATGTAAGTCTTTTAAAACTTTAGATTTAACGAGATATCATTAATTATATAATGTTTAGAACTATTTAGGAATGCATATTTGTTCACTTTAGCAATCAAATTTTTATTCATCTGTTTGGTTTGGGAATTTGTCGAATTAAACCAAATTATCAATGCTCTTTTGTTTGGTTTGGACAAAGGGCTGAATATCAAACCATACCAATTTAGTTTTGATTCTTGAGTTGATCTTGATTGACTCGACTGGAATATTTGCAATGGATGTAGTTTGAAGGTGAAATATGGTTTCTGCAATTCGCTTTTTACTCAGATGCACTTTACATGTGTAACTGAGATGATGTAATTCCCAGATCAATATGGTTGTGTATATTAAACCACCAATTCATCCAAAAGCTTAAGCTTGTGGTTGAAGGCAAATTTAATTATATATCACCAACACTCCCCCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGAATCAATTTTACCTCACTTTTGGGTTTGAAATATTTGAAAGGCCCAACAAGTGGAAATTGATTTTAATTGGGGAGGAAACGACAATGCAAGGGCTTGAACACAGGACCTCCCTGGACCACCTGCTCTGATACCATATTAAACCACCAATTCATCCAAAAGCTTAAGCTCGTGGTTGAAGGCAAATTTAATTATATATCACCAACACTCCCCCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGAATCTTATATATCACCAACACTCCCCCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGAATCTTATATATCACCAACACTCCCCCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGGAATCAATTTTAATTGGGGAGGAAACGACACTCCGTCTCACTTGTGGGCTTGAAATATCTGAAAGGCCCAACAAGTGGAAATCAATTTTAATTGGGGAGGAAACGACAATGCAGGGGCTTGAACACAGGACCTCCCTGGACCACCTGCTCTGATACCATATTAAACCACCAATTCATCCAAAAGCTTAAGCTCGTGGTTGAAGGCAAATTTAATTATATATCACCAACAGTGTATTAGTTATTTCTGTTTCTTCTTCCTTTTGTAAGTGTTTCTAAGCATTGTGGCACTGTTTGTTGCTCGTGCATGTTTGAGTTGTGAATTATATTCTACTCATGTTAATTTCTGGTATGAGGTTATTTGTGATCTATTGGGTCTTTGCCGAGAGCTTAGCTATCTCCTGAGCAGCAAAGACTGACCAATATTATTTCCCTTCACTCTGAATATGTGTAGATATTTTATACGATTCATGGTCGCCTGCAATGACTATAAGTTCTATTTGTATCAACATTTTCTCCATGCTGTCGAGTTCCACAGCAAAGGTACGATACACTTCCTTCCATTTTGATTCTAAATGTATAGTTGATATATTTTTCATGGAGGTGCTGGAAGTAGCAAAACTCTTACATTCTTTGAAATTGTTAAGATTCAAGTAACGTGTGCGCGTTCCTCTCTTGATAGTCTCTTTTTTTTCTGTTTGCTCTATTATTCATCTTTTATTAATGTTTCATTCGAGATGGAATGGCTAGTATGTTGGACATTAAGTGTCTACTATGCTTATTATATTTAAAGGCTTACACGGTAACTTGGTTGCATAATAATTTTCTTAGGGGCTATAAATAGCGGCTTTTGACCCTTGATTAGATTTTCTGATTTTATATCTTCTGTATTTCTTTTGTGCACACTAGATAGGTCCTAATCTGAAACTTCCGATTTCTATTTTCTAAAGTTGCTCTTGCAAATGTTAGAAACTCCTAATCCAACTATTGTTCTGTTTAAAAATATTTGCCTTTCTCCTTTCCCTTTATTGGGGGGCAGGTTTACTCTGTAATATATAGACTCATCTTAAATGAATATTGGTGCAAATAATACTTAATTGTGTCAGTAGTGTGTTCCTAACTATCCCATAATGTATGCTTTGGCAGGGGAGCTTTGCTGTCTCATATTACAACTGGGGACGATGTACTAGTCTTGGGTGCTTTAAGTGTTCTGGCTACACTTCTGCAAACTAA

mRNA sequence

ATGTTGGCATGGCGGTTGAGCATTCAACAACTTGGAATGTTACAACGCTTCCCTCGAGCGTTCTTCCGTCTCGCGAGTCCTTTACTTCAAATGGGGCACCGGATGTCTTATTCCACATATGCTTCACATCCCCCACTCTCCGACCTCCATCAAACCATGCCCTCAGTACAGTTTATTTCGTTACCTTTGTGCTGTTATCTCATGGGACTTTTTAGGAACATTGATACTCTTATCAAGTTCCATGGGTTGCTTATAGTACACGGCCTTATCGGTAATCTTCTTTGTGATACCAAGTTGGTTGGTGTTTATGGCGCACTTGGGGATGTGAGGTCTGCTCGAATGGTGTTCGATCAAATGCCCAACCCCGATTTTTATGCGTGGAAGGTGATGATCAGGCAACCCAACGATGGATTGAGGCTTTTTGCTGATGAAATAAGGTCAGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTTTCAGCATGTTCGGTTTCTGGTAATTTGAATTTAGGAATGTCAGTTCATGGACTTGGGATTAAAATTGGGCTGGAAGAATGTGTGGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATAAGATTGGTGATGCTTATGCTATATTTCATGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCTATGATATCTGGGTATGCTCAAAATGGATCTGCTTATGATGCCCTCCGTCTCTTTAATCAAATGAGATCATACTCCCTTGCACCTGATGCAATAACGCTTGTGAGCACTCTTTCAGCATCTGCCACTCTTGGTGCTATACAGGTTGGTTCATCACTTCATGCTTATTCGGTTAAAGGAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGCGGTGATGCAAGATCAGCACGAATGGTGTTCGATAGTATGGGAGTTAAGAATATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGACTTCATTAAGAAAATGCCAGTTCAACCAGACGTTAGTTTGTATGGAGCTTTCCTTCATGGATGTGGATTATACTCGAGGTTTGATCTCGGAGAAGTCGTAGTCAGGGAAATGCTACAGCTACATCGAAATGAAGCTTGCTATTATGTGCTCGTATCTAACCTTTATGCTTCAGATGGGAAATGGGGTCAAGTTAATGAGGTGAGAGATTTGATGCTTCAGAGAGGTCTGAACAAAGTCCCGGGGTATAGCCTTGTAGAAACTAATGCAGATATTTTATACGATTCATGGTCGCCTGCAATGACTATAAGTTCTATTTGTATCAACATTTTCTCCATGCTGTCGAGTTCCACAGCAAAGGGGAGCTTTGCTGTCTCATATTACAACTGGGGACGATGTACTAGTCTTGGGTGCTTTAAGTGTTCTGGCTACACTTCTGCAAACTAA

Coding sequence (CDS)

ATGTTGGCATGGCGGTTGAGCATTCAACAACTTGGAATGTTACAACGCTTCCCTCGAGCGTTCTTCCGTCTCGCGAGTCCTTTACTTCAAATGGGGCACCGGATGTCTTATTCCACATATGCTTCACATCCCCCACTCTCCGACCTCCATCAAACCATGCCCTCAGTACAGTTTATTTCGTTACCTTTGTGCTGTTATCTCATGGGACTTTTTAGGAACATTGATACTCTTATCAAGTTCCATGGGTTGCTTATAGTACACGGCCTTATCGGTAATCTTCTTTGTGATACCAAGTTGGTTGGTGTTTATGGCGCACTTGGGGATGTGAGGTCTGCTCGAATGGTGTTCGATCAAATGCCCAACCCCGATTTTTATGCGTGGAAGGTGATGATCAGGCAACCCAACGATGGATTGAGGCTTTTTGCTGATGAAATAAGGTCAGATCTCTTACCTAATTCTGTCACTGCTGCAAGTGTTCTTTCAGCATGTTCGGTTTCTGGTAATTTGAATTTAGGAATGTCAGTTCATGGACTTGGGATTAAAATTGGGCTGGAAGAATGTGTGGTGAAGAATGCTCTTATTGACATGTATGCTAAATGCCATAAGATTGGTGATGCTTATGCTATATTTCATGGGGTTTTGGAAAAAGATGTGATTACTTGGAACTCTATGATATCTGGGTATGCTCAAAATGGATCTGCTTATGATGCCCTCCGTCTCTTTAATCAAATGAGATCATACTCCCTTGCACCTGATGCAATAACGCTTGTGAGCACTCTTTCAGCATCTGCCACTCTTGGTGCTATACAGGTTGGTTCATCACTTCATGCTTATTCGGTTAAAGGAGGCTTATTTTCATCTAATCTTTACATTGGCACTGCACTTTTGAACTTTTATGCTAAATGCGGTGATGCAAGATCAGCACGAATGGTGTTCGATAGTATGGGAGTTAAGAATATTATCACGTGGAGTGCAATGATAGGTGGTTATGGAGTGCAGGACTTCATTAAGAAAATGCCAGTTCAACCAGACGTTAGTTTGTATGGAGCTTTCCTTCATGGATGTGGATTATACTCGAGGTTTGATCTCGGAGAAGTCGTAGTCAGGGAAATGCTACAGCTACATCGAAATGAAGCTTGCTATTATGTGCTCGTATCTAACCTTTATGCTTCAGATGGGAAATGGGGTCAAGTTAATGAGGTGAGAGATTTGATGCTTCAGAGAGGTCTGAACAAAGTCCCGGGGTATAGCCTTGTAGAAACTAATGCAGATATTTTATACGATTCATGGTCGCCTGCAATGACTATAAGTTCTATTTGTATCAACATTTTCTCCATGCTGTCGAGTTCCACAGCAAAGGGGAGCTTTGCTGTCTCATATTACAACTGGGGACGATGTACTAGTCTTGGGTGCTTTAAGTGTTCTGGCTACACTTCTGCAAACTAA

Protein sequence

MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNADILYDSWSPAMTISSICINIFSMLSSSTAKGSFAVSYYNWGRCTSLGCFKCSGYTSAN*

Homology

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BLAST of CsaV3_5G008590 vs. NCBI nr
Match: KAE8648006.1 (hypothetical protein Csa_021412 [Cucumis sativus])

HSP 1 Score: 968.0 bits (2501), Expect = 3.0e-278
Identity = 481/481 (100.00%), Postives = 481/481 (100.00%), Query Frame = 0


Query: 1   MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS 60
           MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS
Sbjct: 1   MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS 60

Query: 61  LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP 120
           LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP
Sbjct: 61  LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP 120

Query: 121 NPDFYAWKVMIRQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGI 180
           NPDFYAWKVMIRQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGI
Sbjct: 121 NPDFYAWKVMIRQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGI 180

Query: 181 KIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRL 240
           KIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRL
Sbjct: 181 KIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRL 240

Query: 241 FNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYA 300
           FNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYA
Sbjct: 241 FNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYA 300

Query: 301 KCGDARSARMVFDSMGVKNIITWSAMIGGYGVQDFIKKMPVQPDVSLYGAFLHGCGLYSR 360
           KCGDARSARMVFDSMGVKNIITWSAMIGGYGVQDFIKKMPVQPDVSLYGAFLHGCGLYSR
Sbjct: 301 KCGDARSARMVFDSMGVKNIITWSAMIGGYGVQDFIKKMPVQPDVSLYGAFLHGCGLYSR 360

Query: 361 FDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVE 420
           FDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVE
Sbjct: 361 FDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVE 420

Query: 421 TNADILYDSWSPAMTISSICINIFSMLSSSTAKGSFAVSYYNWGRCTSLGCFKCSGYTSA 480
           TNADILYDSWSPAMTISSICINIFSMLSSSTAKGSFAVSYYNWGRCTSLGCFKCSGYTSA
Sbjct: 421 TNADILYDSWSPAMTISSICINIFSMLSSSTAKGSFAVSYYNWGRCTSLGCFKCSGYTSA 480

Query: 481 N 482
           N
Sbjct: 481 N 481

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BLAST of CsaV3_5G008590 vs. NCBI nr
Match: XP_031742318.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis sativus])

HSP 1 Score: 736.1 bits (1899), Expect = 1.9e-208
Identity = 424/712 (59.55%), Postives = 426/712 (59.83%), Query Frame = 0


Query: 1   MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS 60
           MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS
Sbjct: 1   MLAWRLSIQQLGMLQRFPRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFIS 60

Query: 61  LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP 120
           LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP
Sbjct: 61  LPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP 120

Query: 121 NPDFYAWKVMI------------------------------------------------- 180
           NPDFYAWKVMI                                                 
Sbjct: 121 NPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRK 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 VHCQIVKVGGPDSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCA 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 EEGLVLFNRMRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIAELSSFLATTF 300

Query: 301 --------------------------------------RQPNDGLRLFADEIRSDLLPNS 360
                                                 RQPNDGLRLFADEIRSDLLPNS
Sbjct: 301 LDMYVKCGQTRDARMIYDELPTIDLVSWTAMIVGYTQARQPNDGLRLFADEIRSDLLPNS 360

Query: 361 VTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGV 420
           VTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGV
Sbjct: 361 VTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGV 420

Query: 421 LEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGS 428
           LEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGS
Sbjct: 421 LEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGS 480

[Close]

BLAST of CsaV3_5G008590 vs. NCBI nr
Match: XP_008456885.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902050.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902051.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo] >XP_016902052.1 PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis melo])

HSP 1 Score: 671.8 bits (1732), Expect = 4.5e-189
Identity = 394/703 (56.05%), Postives = 401/703 (57.04%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PRAF  L   LLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISL  CCYLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP+PDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPNDGLRLFADEIRSDLLPNSVTAASVLSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 428
           CSVSGNLNLGMSVHGLGIK+GLEEC VKNALIDMYAKCHKIGDAY IFHGVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. NCBI nr
Match: TYK25892.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 671.0 bits (1730), Expect = 7.6e-189
Identity = 394/704 (55.97%), Postives = 401/704 (56.96%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PRAF  L   LLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISL  CCYLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP+PDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPNDGLRLFADEIRSDLLPNSVTAASVLSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 429
           CSVSGNLNLGMSVHGLGIK+GLEEC VKNALIDMYAKCHKIGDAY IFHGVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. NCBI nr
Match: XP_038893238.1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa hispida])

HSP 1 Score: 615.1 bits (1585), Expect = 5.0e-172
Identity = 364/703 (51.78%), Postives = 386/703 (54.91%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PRAF RLA PLLQMGH MSY  YASHPPLSDLHQTM S Q ISL  C YL+G
Sbjct: 1   MLQRFFNLPRAFSRLAGPLLQMGHHMSYCAYASHPPLSDLHQTMASAQSISLHSCFYLIG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           L +NIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQMP+PDFYAWKV
Sbjct: 61  LCKNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMPDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDLFVDIIPFYNRMRMSFRECDKIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIESSSVVFEEIVDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MREALVESNPFTLGSIITACTKLRALHQGKWVHGYAIKNMMELSSFLATAFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPN+ LRLFADEIRS LLPNSVTAASVLS+
Sbjct: 301 TKDARMIFDELPTIDLVSWTAMVVGYTQVGQPNEALRLFADEIRSGLLPNSVTAASVLSS 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 428
           CSVSGNL+LGMSVHGLGIK+GLEEC VKNALIDMY+KCH I DAY IF GVLEKDVITWN
Sbjct: 361 CSVSGNLSLGMSVHGLGIKLGLEECAVKNALIDMYSKCHMIDDAYVIFRGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot
Match: Q9ZQ74 (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 3.7e-93
Identity = 188/426 (44.13%), Postives = 252/426 (59.15%), Query Frame = 0


Query: 80  FHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMI------RQ 139
           FHG L+  G+  +    T L+ +Y   GD+ +AR VF++  + D   W  MI        
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323

Query: 140 PNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNAL 199
            N+ L LF      ++ PN VT ASVLS C +  NL LG SVHGL IK+G+ +  V NAL
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANAL 383

Query: 200 IDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDA 259
           + MYAKC++  DA  +F    EKD++ WNS+ISG++QNGS ++AL LF++M S S+ P+ 
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443

Query: 260 ITLVSTLSASATLGAIQVGSSLHAYSVK-GGLFSSNLYIGTALLNFYAKCGDARSARMVF 319
           +T+ S  SA A+LG++ VGSSLHAYSVK G L SS++++GTALL+FYAKCGD +SAR++F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503

Query: 320 DSMGVKNIITWSAMIGGYGVQ--------------------------------------- 379
           D++  KN ITWSAMIGGYG Q                                       
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563

Query: 380 ---------------------------------------DFIKKMPVQPDVSLYGAFLHG 421
                                                  D I+KMP+QPDV  +GAFLHG
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.3e-53
Identity = 128/453 (28.26%), Postives = 208/453 (45.92%), Query Frame = 0


Query: 58  FISLPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFD 117
           FI++      +   R I    + HG  +  G    +   T LV +Y   G + +AR +FD
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295

Query: 118 QMPNPDFYAWKVMI------RQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNL 177
            M   +  +W  MI        P + + +F   +   + P  V+    L AC+  G+L  
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355

Query: 178 GMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQ 237
           G  +H L +++GL+  V V N+LI MY KC ++  A ++F  +  + +++WN+MI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415

Query: 238 NGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLY 297
           NG   DAL  F+QMRS ++ PD  T VS ++A A L        +H   ++  L   N++
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL-DKNVF 475

Query: 298 IGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQ----------------- 357
           + TAL++ YAKCG    AR++FD M  +++ TW+AMI GYG                   
Sbjct: 476 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 535

Query: 358 ------------------------------------------------------------ 417
                                                                       
Sbjct: 536 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 595

Query: 418 -DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASD 426
            DFI +MPV+P V++YGA L  C ++   +  E     + +L+ ++  Y+VL++N+Y + 
Sbjct: 596 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 655

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot
Match: Q9CAY1 (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 2.3e-47
Identity = 123/411 (29.93%), Postives = 189/411 (45.99%), Query Frame = 0


Query: 97  TKLVGVYGALGDVRSARMVFDQMPNPD--FYAWKVMI------RQPNDGLRLFADEIRSD 156
           T L+ +Y   G V  AR VF++ P        +  +I       +  D   +F     + 
Sbjct: 92  TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151

Query: 157 LLPNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLE-ECVVKNALIDMYAKCHKIGDAY 216
           +  +SVT   ++  C+V   L LG S+HG  +K GL+ E  V N+ I MY KC  +    
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211

Query: 217 AIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLG 276
            +F  +  K +ITWN++ISGY+QNG AYD L L+ QM+S  + PD  TLVS LS+ A LG
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271

Query: 277 AIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMI 336
           A ++G  +       G F  N+++  A ++ YA+CG+   AR VFD M VK++++W+AMI
Sbjct: 272 AKKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 331

Query: 337 GGYGV------------------------------------------------------- 396
           G YG+                                                       
Sbjct: 332 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 391

Query: 397 -----------------------QDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVR 421
                                   +FI+ MPV+PD +++GA L  C ++   D+ E+   
Sbjct: 392 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 451

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot
Match: Q9LIC3 (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-47
Identity = 118/418 (28.23%), Postives = 199/418 (47.61%), Query Frame = 0


Query: 97  TKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRQ------PNDGLRLFADEIRSDLL 156
           T+L+  YG    +  AR V D+MP  +  +W  MI +       ++ L +FA+ +RSD  
Sbjct: 91  TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150

Query: 157 PNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAI 216
           PN  T A+VL++C  +  L LG  +HGL +K   +  + V ++L+DMYAK  +I +A  I
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210

Query: 217 FHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAI 276
           F  + E+DV++  ++I+GYAQ G   +AL +F+++ S  ++P+ +T  S L+A + L  +
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270

Query: 277 QVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGG 336
             G   H + ++  L      +  +L++ Y+KCG+   AR +FD+M  +  I+W+AM+ G
Sbjct: 271 DHGKQAHCHVLRREL-PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 330

Query: 337 YGVQ-------------------------------------------------------- 396
           Y                                                           
Sbjct: 331 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 390

Query: 397 ------------------------DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVR 428
                                   +FIK+MP +P   + G+ L  C ++   D+GE V R
Sbjct: 391 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 450

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 189.9 bits (481), Expect = 6.8e-47
Identity = 116/397 (29.22%), Postives = 190/397 (47.86%), Query Frame = 0


Query: 112 ARMVFDQMPNP-DFYAWKVMIR------QPNDGLRLFADEIRSDLL-PNSVTAASVLSAC 171
           A  VF ++  P + + W  +IR             L+ +   S L+ P++ T   ++ A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 172 SVSGNLNLGMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 231
           +   ++ LG ++H + I+ G    + V+N+L+ +YA C  +  AY +F  + EKD++ WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 232 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKG 291
           S+I+G+A+NG   +AL L+ +M S  + PD  T+VS LSA A +GA+ +G  +H Y +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 292 GLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQ--------- 351
           GL + NL+    LL+ YA+CG    A+ +FD M  KN ++W+++I G  V          
Sbjct: 252 GL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 311

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 312 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 371

Query: 412 ----------DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYV 421
                     ++IK MP+QP+V ++   L  C ++   DL E    ++LQL  N +  YV
Sbjct: 372 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 431

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL
Match: A0A1S4E1F1 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496696 PE=4 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 2.2e-189
Identity = 394/703 (56.05%), Postives = 401/703 (57.04%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PRAF  L   LLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISL  CCYLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP+PDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPNDGLRLFADEIRSDLLPNSVTAASVLSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 428
           CSVSGNLNLGMSVHGLGIK+GLEEC VKNALIDMYAKCHKIGDAY IFHGVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL
Match: A0A5D3DQT2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G001190 PE=4 SV=1)

HSP 1 Score: 671.0 bits (1730), Expect = 3.7e-189
Identity = 394/704 (55.97%), Postives = 401/704 (56.96%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PRAF  L   LLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISL  CCYLMG
Sbjct: 1   MLQRFFSLPRAFSHLTGSLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLHSCCYLMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMP+PDFYAWKV
Sbjct: 61  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDLFVDVIPFYNCMRMSFRECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVMTGLIDMYGKCRQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRDALVESNPFTLGSIINACTKLRALHQGKWVHGYAIKNIVEFSSFLATTFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPNDGLRLFADEIRSDLLPNSVTAASVLSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQASQPNDGLRLFADEIRSDLLPNSVTAASVLSA 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 429
           CSVSGNLNLGMSVHGLGIK+GLEEC VKNALIDMYAKCHKIGDAY IFHGVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECAVKNALIDMYAKCHKIGDAYVIFHGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL
Match: A0A6J1KBI2 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492392 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 4.0e-167
Identity = 357/701 (50.93%), Postives = 379/701 (54.07%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PR F RLA PLL+MGH +SYSTYAS PPLSDL QTM SVQFISL  C Y MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM +PDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFRECDNIIFSIILKACCELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIELSSFLATAFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPN+ L LF D+IRS LLPNSVTAAS+LSA
Sbjct: 301 TRDARMIFDELPTIDLVSWTAMIVGYTQAGQPNEALSLFTDKIRSGLLPNSVTAASILSA 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 426
           CSVSGNL++GMSVHGLGIK+GL EC VKNALIDMYAKCH I DAY +F GVLEKDVITWN
Sbjct: 361 CSVSGNLSIGMSVHGLGIKLGLAECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL
Match: A0A6J1GZK8 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458927 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 9.8e-166
Identity = 356/702 (50.71%), Postives = 378/702 (53.85%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF   PR F RLA PLL+MGH +SYSTYAS PPLSDL QTM SVQFISL  C Y MG
Sbjct: 1   MLQRFFSLPRIFSRLAGPLLEMGHHISYSTYASQPPLSDLDQTMASVQFISLHSCFYFMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SARMVFDQM +PDFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVGSARMVFDQMRDPDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDMFANIIPFYNRMRMSFKECDNIIFSIILKACSELREIDEGRKVHCQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVLTGLIDMYGKCGQIECSSAVFEGIIDKNVVSWTTMIAGYVQNDCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRESLVESNQFTLGSIITACTRLRALHQGKWVHGYAIKNVIFELNSFLATAFLDMYVKCG 300

Query: 313 -------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLS 372
                                          QPN+ LRLF D+IRS LLPNSVTAAS+LS
Sbjct: 301 QTRDARMIFDELPSIDLVSWTAMIVGYSQAGQPNEALRLFTDKIRSGLLPNSVTAASILS 360

Query: 373 ACSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITW 426
           ACSVSGNL++GM VHGLGIK+GLEEC VKNALIDMYAKCH I DAY +F GVLEKDVITW
Sbjct: 361 ACSVSGNLSIGMLVHGLGIKLGLEECAVKNALIDMYAKCHMIDDAYVVFLGVLEKDVITW 420

[Close]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL
Match: A0A6J1DAW0 (pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018771 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 7.5e-158
Identity = 347/706 (49.15%), Postives = 376/706 (53.26%), Query Frame = 0


Query: 13  MLQRF---PRAFFRLASPLLQMGHRMSYSTYASHPPLSDLHQTMPSVQFISLPLCCYLMG 72
           MLQRF    R+F RLA  L+++G+ M  STY   P LS+L QTM SVQFISL    YLMG
Sbjct: 1   MLQRFLSLRRSFSRLAGSLIELGN-MYCSTYPPQPQLSELDQTMASVQFISLNSSFYLMG 60

Query: 73  LFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKV 132
           L RNIDTLIKFHGLLIVHGL+GNLLCDTKLVGVYGALGDV SAR+VFDQMP+ DFYAWKV
Sbjct: 61  LCRNIDTLIKFHGLLIVHGLVGNLLCDTKLVGVYGALGDVDSARLVFDQMPDRDFYAWKV 120

Query: 133 MIR--------------------------------------------------------- 192
           MIR                                                         
Sbjct: 121 MIRWYFLNDMFADIIPFYNSMRMSFTESDNIIFSIILKACSELREIVEGRKVHGQIVKVG 180

Query: 193 ------------------------------------------------------------ 252
                                                                       
Sbjct: 181 GPDSFVLTGLVDMYAKCGQIECSCAVFEGIIDKNVVSWTSMIAGYVQNDCAEEGLVLFNR 240

Query: 253 ------------------------------------------------------------ 312
                                                                       
Sbjct: 241 MRAALVESNQFTLGSIITACTKLRALHQGKWVHGYAIKNVVKLSAFLTTTFLDMYVKCGQ 300

Query: 313 ------------------------------QPNDGLRLFADEIRSDLLPNSVTAASVLSA 372
                                         QPN+ LRLFA EIRSDLLPNSVTAA+VLS+
Sbjct: 301 TRDARIMFDELPTIDRVSWTAMIVGYTQAGQPNEALRLFAGEIRSDLLPNSVTAATVLSS 360

Query: 373 CSVSGNLNLGMSVHGLGIKIGLEECVVKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 431
           CSVSGNLNLGMSVHGLGIK+GLEEC VKNALIDMYAKCH I +AY IFHGVLEKDVITWN
Sbjct: 361 CSVSGNLNLGMSVHGLGIKLGLEECGVKNALIDMYAKCHMIDEAYVIFHGVLEKDVITWN 420

[Close]

BLAST of CsaV3_5G008590 vs. TAIR 10
Match: AT2G03380.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 343.6 bits (880), Expect = 2.6e-94
Identity = 188/426 (44.13%), Postives = 252/426 (59.15%), Query Frame = 0


Query: 80  FHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMI------RQ 139
           FHG L+  G+  +    T L+ +Y   GD+ +AR VF++  + D   W  MI        
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323

Query: 140 PNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECVVKNAL 199
            N+ L LF      ++ PN VT ASVLS C +  NL LG SVHGL IK+G+ +  V NAL
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANAL 383

Query: 200 IDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDA 259
           + MYAKC++  DA  +F    EKD++ WNS+ISG++QNGS ++AL LF++M S S+ P+ 
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443

Query: 260 ITLVSTLSASATLGAIQVGSSLHAYSVK-GGLFSSNLYIGTALLNFYAKCGDARSARMVF 319
           +T+ S  SA A+LG++ VGSSLHAYSVK G L SS++++GTALL+FYAKCGD +SAR++F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503

Query: 320 DSMGVKNIITWSAMIGGYGVQ--------------------------------------- 379
           D++  KN ITWSAMIGGYG Q                                       
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563

Query: 380 ---------------------------------------DFIKKMPVQPDVSLYGAFLHG 421
                                                  D I+KMP+QPDV  +GAFLHG
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623

[Close]

BLAST of CsaV3_5G008590 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 209.9 bits (533), Expect = 4.5e-54
Identity = 128/453 (28.26%), Postives = 208/453 (45.92%), Query Frame = 0


Query: 58  FISLPLCCYLMGLFRNIDTLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFD 117
           FI++      +   R I    + HG  +  G    +   T LV +Y   G + +AR +FD
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295

Query: 118 QMPNPDFYAWKVMI------RQPNDGLRLFADEIRSDLLPNSVTAASVLSACSVSGNLNL 177
            M   +  +W  MI        P + + +F   +   + P  V+    L AC+  G+L  
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355

Query: 178 GMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWNSMISGYAQ 237
           G  +H L +++GL+  V V N+LI MY KC ++  A ++F  +  + +++WN+MI G+AQ
Sbjct: 356 GRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ 415

Query: 238 NGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLY 297
           NG   DAL  F+QMRS ++ PD  T VS ++A A L        +H   ++  L   N++
Sbjct: 416 NGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL-DKNVF 475

Query: 298 IGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQ----------------- 357
           + TAL++ YAKCG    AR++FD M  +++ TW+AMI GYG                   
Sbjct: 476 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT 535

Query: 358 ------------------------------------------------------------ 417
                                                                       
Sbjct: 536 IKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 595

Query: 418 -DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASD 426
            DFI +MPV+P V++YGA L  C ++   +  E     + +L+ ++  Y+VL++N+Y + 
Sbjct: 596 WDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAA 655

[Close]

BLAST of CsaV3_5G008590 vs. TAIR 10
Match: AT3G11460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 191.4 bits (485), Expect = 1.7e-48
Identity = 123/411 (29.93%), Postives = 189/411 (45.99%), Query Frame = 0


Query: 97  TKLVGVYGALGDVRSARMVFDQMPNPD--FYAWKVMI------RQPNDGLRLFADEIRSD 156
           T L+ +Y   G V  AR VF++ P        +  +I       +  D   +F     + 
Sbjct: 92  TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151

Query: 157 LLPNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLE-ECVVKNALIDMYAKCHKIGDAY 216
           +  +SVT   ++  C+V   L LG S+HG  +K GL+ E  V N+ I MY KC  +    
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGR 211

Query: 217 AIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLG 276
            +F  +  K +ITWN++ISGY+QNG AYD L L+ QM+S  + PD  TLVS LS+ A LG
Sbjct: 212 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271

Query: 277 AIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMI 336
           A ++G  +       G F  N+++  A ++ YA+CG+   AR VFD M VK++++W+AMI
Sbjct: 272 AKKIGHEVGKLVESNG-FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 331

Query: 337 GGYGV------------------------------------------------------- 396
           G YG+                                                       
Sbjct: 332 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 391

Query: 397 -----------------------QDFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVR 421
                                   +FI+ MPV+PD +++GA L  C ++   D+ E+   
Sbjct: 392 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFA 451

[Close]

BLAST of CsaV3_5G008590 vs. TAIR 10
Match: AT3G13770.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-48
Identity = 118/418 (28.23%), Postives = 199/418 (47.61%), Query Frame = 0


Query: 97  TKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRQ------PNDGLRLFADEIRSDLL 156
           T+L+  YG    +  AR V D+MP  +  +W  MI +       ++ L +FA+ +RSD  
Sbjct: 91  TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150

Query: 157 PNSVTAASVLSACSVSGNLNLGMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAI 216
           PN  T A+VL++C  +  L LG  +HGL +K   +  + V ++L+DMYAK  +I +A  I
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREI 210

Query: 217 FHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAI 276
           F  + E+DV++  ++I+GYAQ G   +AL +F+++ S  ++P+ +T  S L+A + L  +
Sbjct: 211 FECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALL 270

Query: 277 QVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGG 336
             G   H + ++  L      +  +L++ Y+KCG+   AR +FD+M  +  I+W+AM+ G
Sbjct: 271 DHGKQAHCHVLRREL-PFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVG 330

Query: 337 YGVQ-------------------------------------------------------- 396
           Y                                                           
Sbjct: 331 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 390

Query: 397 ------------------------DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVR 428
                                   +FIK+MP +P   + G+ L  C ++   D+GE V R
Sbjct: 391 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 450

[Close]

BLAST of CsaV3_5G008590 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-48
Identity = 116/397 (29.22%), Postives = 190/397 (47.86%), Query Frame = 0


Query: 112 ARMVFDQMPNP-DFYAWKVMIR------QPNDGLRLFADEIRSDLL-PNSVTAASVLSAC 171
           A  VF ++  P + + W  +IR             L+ +   S L+ P++ T   ++ A 
Sbjct: 72  AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131

Query: 172 SVSGNLNLGMSVHGLGIKIGLEECV-VKNALIDMYAKCHKIGDAYAIFHGVLEKDVITWN 231
           +   ++ LG ++H + I+ G    + V+N+L+ +YA C  +  AY +F  + EKD++ WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191

Query: 232 SMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKG 291
           S+I+G+A+NG   +AL L+ +M S  + PD  T+VS LSA A +GA+ +G  +H Y +K 
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251

Query: 292 GLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQ--------- 351
           GL + NL+    LL+ YA+CG    A+ +FD M  KN ++W+++I G  V          
Sbjct: 252 GL-TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIEL 311

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 312 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 371

Query: 412 ----------DFIKKMPVQPDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYV 421
                     ++IK MP+QP+V ++   L  C ++   DL E    ++LQL  N +  YV
Sbjct: 372 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 431

The following BLAST results are available for this feature:

BLAST of CsaV3_5G008590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648006.1	3.0e-278	100.00	hypothetical protein Csa_021412 [Cucumis sativus]	[more]
XP_031742318.1	1.9e-208	59.55	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Cucumis sa...	[more]
XP_008456885.1	4.5e-189	56.05	PREDICTED: pentatricopeptide repeat-containing protein At2g03380, mitochondrial ...	[more]
TYK25892.1	7.6e-189	55.97	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_038893238.1	5.0e-172	51.78	pentatricopeptide repeat-containing protein At2g03380, mitochondrial [Benincasa ...	[more]

BLAST of CsaV3_5G008590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ74	3.7e-93	44.13	Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop...	[more]
Q3E6Q1	6.3e-53	28.26	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
Q9CAY1	2.3e-47	29.93	Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
Q9LIC3	6.8e-47	28.23	Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS...	[more]
A8MQA3	6.8e-47	29.22	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_5G008590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1F1	2.2e-189	56.05	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucumis ...	[more]
A0A5D3DQT2	3.7e-189	55.97	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1KBI2	4.0e-167	50.93	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A6J1GZK8	9.8e-166	50.71	pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Cucurbit...	[more]
A0A6J1DAW0	7.5e-158	49.15	pentatricopeptide repeat-containing protein At2g03380, mitochondrial isoform X1 ...	[more]

BLAST of CsaV3_5G008590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03380.1	2.6e-94	44.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G11290.1	4.5e-54	28.26	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G11460.1	1.7e-48	29.93	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G13770.1	4.8e-48	28.23	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	4.8e-48	29.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 219..253 e-value: 5.9E-9 score: 33.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 216..257 e-value: 4.0E-10 score: 39.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 293..319 e-value: 0.081 score: 13.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 217..251 score: 12.802855
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 336..423 e-value: 1.1E-6 score: 30.1 coord: 96..186 e-value: 2.9E-7 score: 32.0 coord: 271..335 e-value: 1.8E-7 score: 32.7 coord: 187..270 e-value: 3.7E-19 score: 70.8
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 334..424
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 80..333
None	No IPR available	PANTHER	PTHR24015:SF1951	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL	coord: 80..333 coord: 334..424

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G008590.1	CsaV3_5G008590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding