CsaV3_5G006510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G006510
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Descriptionserine/arginine-rich splicing factor RS2Z32-like isoform X2
Locationchr5: 4333368 .. 4336255 (-)
RNA-Seq ExpressionCsaV3_5G006510
SyntenyCsaV3_5G006510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGCAGCTTACGGAAATCATTTTTGCGAAAGACGTGAAATTTAGGGTTTCGTATCCTTATTGTTTCCAGGTTCGCCTCGCCTCCCCTACGATTTTTCTAGGTTTTCTCTCCTCGAATCCTCCGACTCCATATTTCCACAGCATTTTTCTGTTGATTGTTTTTGCTCAATCGCCGTTTTGTATGTTCTATATTTTTCTTATTAAATAAATTTATTGGATTTTTCTCTTCGATTTGTCAAATTGTTGAATTGTGTATATTTTCACTTGTTTCAACGTATTTCTGATTTGAATACTGGCACAAGTAATTGGTTTTTAAATTATGTCGTTGATTGTGGTGCTGTGGTTGTTTATTTTAGATAAAATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGGTATGCCAATTTTTTCTGGGTGTAATCCGATATTGATCGAATTTGTGTGCTAAATATAATTTGATGAATACGGAAAGTTTGTGTGTTTAGTTGTGTCTTTTTCTTTCCTTCTATTGGCCGGTTTTGCTATTGCTAACATCCTTGTCAGAGTAAATTTTTAATTGATACTTCTCTCGAGACCTCATGAGGAATTTGCCAAGCCCTTTTTTGGGTGCACGACTGTGAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGATGATGGGTCTGTGTGGTTTAACTTGAGTGATCTTGTTGAAGGTTTCTTGGCTTATGCCAAACCTGGAGGTCTATGGTGAGAGGGTTCCCTTGGTGGATTTGGCGAGTCTTTCTATTATGTTATTGCCTGTTTTTATGGAAATGCCAAGAATCTCAGAATGGTGTTTAGTTCATCTATGAGGGGCGAGGTGTCAACCCTTTGGTACTTGTATCAAATGATGGCCTTACCTGTTTCTGGAACCAATTTGCGCAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGTATGTATTTCTCTCCCTACACTTCTTTCATTCTTATTTAAGCTATTCCTGGAATATAAAATGATATATGCTAGGATCCTTTCTCTATACTTAATGGCGCATATTAATTTTTGCAAGCGTGATCTTTTTCTTGGTCTATTTGCTTAAACATCTGATATCAGGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTATGTTCCATTATCTTTCCTGACAAACCTTTCATGAACTTTTTAATTTCTTTCAGACAAGTTACCTCTGCTTTTTCCAGACTAGTCTTCGTTTTTATCCTTTTAAGTGGTTAACTATGTTTATCATCTATGGAGAATTAATAACTGTTATGTAATTTTTAATTATTATTTTGGTATATGGAACTTGGATGATAATATCCTTCACGTTCTTTTGTAATTGTACTCTTTTTATAGTCTCATCTTGTCATTTTTATAAAGGCTATGTGTAGTTTTCCTGGCTTGTGCAGGTAAGTTGAAGCTTTGTTTATATCTTGTATTTTAATTTTGTGAACTATTTTTATTTCTTTTGAATGTAATGAAAAACTCCAAATTTGATTTAGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGTATGTTATCTTTTTTATTGTTCTTTCACTTCCCTTTTAATTTTTTCCTGTTGATCATTCTGAATGAAAAAATTGCATGGCACAGGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGGTTTGTTTCAATAGAACCATCTTCCTCTAGTCTGGTATTGAAGTTTTCGTCTTCCTTCACAGCCTTCTTGAGTAACAATTAAGTATTTTACTTGAGGCTTTATTACTTCCTGATTGAGCATTTGTGTATCGTGTCCACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAATAGAGACAGTTCCTTATTTTGCTTGTGCTTAAACACATGCGTTTGCGTTGGAATTTTATAAGAGAGACTTAAATAGTGTATTGTGATTGAATCCCTCAAATGTTCATCAGCACCGTATTTTTTTCCTATTTATAATTCCAGCTTAATTATGATAAATTATATATAATAATCTGTTTCTTATTATTTCGGTAATTTTCTCGATCAAAGTAGTACTTATGAATTCTGTTCTCTTTTGGTAATTTCCATTCGTTCTGATCACATTATAGATTTTCGATTATGGAATTTTAATATTCAAGTGTTTGCTTTTAATGTTAAG

mRNA sequence

ATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAA

Coding sequence (CDS)

ATGCCTCGCTACGACGATCGTTACGGTGGTACACGGCTCTACGTTGGGCGCCTGTCTTCACGTACGAGGTCCCGTGATCTGGATGACCTGTTCAGTCGTTATGGAAGAGTACGCGATGTGGATATGAAGCGAGACTATGCATTTGTTGAGTTTAGTGATCCCCGTGATGCTGACGATGCAAGATATAGTTTAAATGGGCGGGATGTCCATGGAAGTCGAATCATTGTGGAAATAGCTAAAGGGGTACCTCGTGGTCCTGGTGGATCCCGTGAGTATCTTGGTCGAGGTCCTCCAGGAACTGGCCGTTGTTTCAATTGTGGGATCGATGGCCACTGGGCTAGAGATTGCAAGGCTGGAGATTGGAAAAATAAATGTTATCGATGCGGCGAACGGGGTCACATAGAGAAGAATTGCCAGAACAGTCCCAAGAAATTGAAGCGTGGAAGTTACTCACGTTCGCCAAGCCCTCGCCGTGGTAGAAGCCGCAGTCGTAGTTACAGCAGAGGTCGAAGCTACAGTCGATCTAGATCTCCTGTAAAAAGAGATAGAAGCCTTGAACGATCAGATAAAAGATCAAGGAGCCCGAGAGGCAGATCAAGCCCAAAGAGGCACAGTTTGTCACCTCCTCCAAAAGCTATGAAACGTAGCCCAACTCCTGATGAAAGGAGTCCAGAAGAAGATGCAAGACGTAGTCTGTCCCCTGGAAATCGTGACAGCCGCAGTCCTAGAGGTAGAAGCAGAAGCCCAAGAGGAAGGAGCAGGAGTCCAATGGATGAAGGTGAGGACTTCAACGGTGGAGGAAGTAGAAATTATCGAAGGGAAGAGAATGGATACAGTCGCAGCCCCAGCCCGTTGCCTAGAGAAGAAAGGAGTCCTGTAAACGACGAAGATAACAACGGTTCTCCAAGGGGTGGCAGTGAATCTGGCTAA

Protein sequence

MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG*
Homology
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BLAST of CsaV3_5G006510 vs. NCBI nr
Match: XP_004143594.1 (serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004143595.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_031741874.1 serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >KAE8647969.1 hypothetical protein Csa_000224 [Cucumis sativus])

HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 301 SPRGGSESG 310
           SPRGGSESG
Sbjct: 301 SPRGGSESG 309

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BLAST of CsaV3_5G006510 vs. NCBI nr
Match: XP_008445806.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo] >XP_008445807.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis melo])

HSP 1 Score: 600.9 bits (1548), Expect = 6.2e-168
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 301 SPRGGSES 309
           SPRGGSES
Sbjct: 301 SPRGGSES 308

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BLAST of CsaV3_5G006510 vs. NCBI nr
Match: XP_011654929.1 (serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011654930.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_031741873.1 serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 5.5e-164
Identity = 309/337 (91.69%), Postives = 309/337 (91.69%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG 310
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSESG 337

[Close]
BLAST of CsaV3_5G006510 vs. NCBI nr
Match: KAA0034024.1 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 585.9 bits (1509), Expect = 2.1e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 18  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 77

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 78  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 137

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 138 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 197

Query: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 198 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 257

Query: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 258 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 317

Query: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 309
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 318 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 353

[Close]
BLAST of CsaV3_5G006510 vs. NCBI nr
Match: XP_008445803.1 (PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445804.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo] >XP_008445805.1 PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo])

HSP 1 Score: 585.9 bits (1509), Expect = 2.1e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 309
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 336

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BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match: Q8VYA5 (Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=RS2Z33 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 4.3e-79
Identity = 193/324 (59.57%), Postives = 221/324 (68.21%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 240
           SRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D             
Sbjct: 181 SRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD------------- 240

Query: 241 PGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPL-------P 300
               D  SP+    SP    +   + G D +GG       ++NG +   SP+        
Sbjct: 241 ----DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 301 REERSPVND--EDNNGSPRGGSES 309
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match: Q9FYB7 (Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=RS2Z32 PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.1e-78
Identity = 182/279 (65.23%), Postives = 206/279 (73.84%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSP 240
           SYSRSRSPV+R++S+E   RS K   RS SP+GR      SLSP  K +  SP   +R  
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QSLSPDRKVIDASP---KRGS 240

Query: 241 EEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 260
           + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 241 DYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 269

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match: Q3T106 (Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.7e-22
Identity = 99/245 (40.41%), Postives = 125/245 (51.02%), Query Frame = 0 

Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSR 180
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRR 180

Query: 181 SRS-PVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 239
           SRS  +K  RS  RS  RSRS     S +  S SP PK          RSP    RRS S
Sbjct: 181 SRSGSIKGSRSRSRSRSRSRSLSRPRSSRSKSRSPSPKR--------SRSPSGSPRRSAS 235

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match: Q16629 (Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 97/245 (39.59%), Postives = 127/245 (51.84%), Query Frame = 0 

Query: 1   MPRYDDRYGG-TRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRD 60
           M RY  RYGG T++YVG L +     +L+  FS YG +R V + R+   +AFVEF DPRD
Sbjct: 1   MSRY-GRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRD 60

Query: 61  ADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDC 120
           A+DA   L+G+ + GSR+ VE++ G+PR     R    R      RC+ CG  GH+A DC
Sbjct: 61  AEDAVRGLDGKVICGSRVRVELSTGMPRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDC 120

Query: 121 KAGDWKNKCYRCGERGHIEKNCQ--NSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSR 180
                + +  R   R H     +  +  +   RG  SRS SPRR RS S   SR  S  R
Sbjct: 121 HRYSRRRRS-RSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRR 180

Query: 181 SRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPD-ERSPEEDARRSLS 239
           SRS   +     +S  RSRS R RS  +  S     ++  RSP+P   RSP    RRS S
Sbjct: 181 SRSGSIKGSRYFQSPSRSRS-RSRSISRPRS----SRSKSRSPSPKRSRSPSGSPRRSAS 238

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match: Q23121 (Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=6239 GN=rsp-1 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.6e-20
Identity = 111/328 (33.84%), Postives = 140/328 (42.68%), Query Frame = 0 

Query: 12  RLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHG 71
           R+Y+GRL+SR   +D++  F  YG++RDV +K  + FVEF D RDA+DA + LNG+++ G
Sbjct: 4   RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

Query: 72  SRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARD---------------- 131
            R+I++ +K  PRG GG R   G G  G  R  +    G   RD                
Sbjct: 64  ERVILDYSK--PRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 123

Query: 132 ------------------CKAGDWKNKCYRCG-----ERGHIEKN----CQNSPKKLKR- 191
                                 D K++  R G        H   N    C  +P  LKR 
Sbjct: 124 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRC 183

Query: 192 -----------------------------GSYSRSPSPRRGRSRSRSYSRGRSYSRSRSP 251
                                         S SRS S  R R RSRS S  RS SRSRSP
Sbjct: 184 IEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRSSSRSKSRSRSP 243

Query: 252 VKRDRSLERSDKRSRSPRGRSSPKRHSLSP--PPKAMKRSPTPDERSPEEDARRSLSPGN 265
            KR R   +S  RSRS R RS+  R S SP   PK + RSP+P                 
Sbjct: 244 PKRSRRESKSKSRSRS-RSRSADNRKSRSPSRSPKKVDRSPSPP---------------- 303

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match: A0A0A0KS31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 7.9e-169
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 63  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 122

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 123 RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 182

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 183 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 242

Query: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 243 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 302

Query: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 303 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 362

Query: 301 SPRGGSESG 310
           SPRGGSESG
Sbjct: 363 SPRGGSESG 371

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match: A0A1S3BDJ7 (serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.0e-168
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGRSRSRSYSRGRSYSRSRSPVK 180

Query: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240
           RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR
Sbjct: 181 RDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSR 240

Query: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300
           SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG
Sbjct: 241 SPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPLPREERSPVNDEDNNG 300

Query: 301 SPRGGSES 309
           SPRGGSES
Sbjct: 301 SPRGGSES 308

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match: A0A1S3BD24 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488725 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 60

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 61  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180

Query: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240

Query: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300

Query: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 309
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 336

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match: A0A5A7SS39 (Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00080 PE=4 SV=1)

HSP 1 Score: 585.9 bits (1509), Expect = 1.0e-163
Identity = 308/336 (91.67%), Postives = 308/336 (91.67%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG------------------------- 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYG                         
Sbjct: 18  MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGSSSMRGEVSTLWYLYQMMALPVSGT 77

Query: 61  ---RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 120
              RVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY
Sbjct: 78  NLRRVRDVDMKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREY 137

Query: 121 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 180
           LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR
Sbjct: 138 LGRGPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKRGSYSR 197

Query: 181 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 240
           SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA
Sbjct: 198 SPSPRRGRSRSRSYSRGRSYSRSRSPVKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKA 257

Query: 241 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 300
           MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR
Sbjct: 258 MKRSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYR 317

Query: 301 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 309
           REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES
Sbjct: 318 REENGYSRSPSPLPREERSPVNDEDNNGSPRGGSES 353

[Close]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match: A0A6J1CET7 (serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010076 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.0e-155
Identity = 297/329 (90.27%), Postives = 303/329 (92.10%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120
           RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD
Sbjct: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRGPPGTGRCFNCGIDGHWARDCKAGD 120

Query: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR--GRSRSRSYSRGRSYSRSRSP 180
           WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRR  GRSRSRSYSRGRSYSRSRSP
Sbjct: 121 WKNKCYRCGERGHIEKNCQNSPKKLKRGSYSRSPSPRRGGGRSRSRSYSRGRSYSRSRSP 180

Query: 181 VKRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLSPGNRD 240
           +KR+RSLERS+KRSRSPRGR SPKRHSLSPPPKAMKRSPTPDERSPEE ARRS SPGNRD
Sbjct: 181 IKRERSLERSEKRSRSPRGRPSPKRHSLSPPPKAMKRSPTPDERSPEE-ARRSPSPGNRD 240

Query: 241 -------------------SRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYS 300
                              SRSPRGRSRSPRGRSRSPMDE EDF+ GGSRNYRREENGYS
Sbjct: 241 SPRGRSRSPRGRSRSPRGRSRSPRGRSRSPRGRSRSPMDEAEDFD-GGSRNYRREENGYS 300

Query: 301 RSPSPLPREERSPVNDEDNNGSPRGGSES 309
           RSPSPLPREERSP+NDEDNNG+PRGGSES
Sbjct: 301 RSPSPLPREERSPINDEDNNGTPRGGSES 327

[Close]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match: AT2G37340.1 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 296.2 bits (757), Expect = 3.1e-80
Identity = 193/324 (59.57%), Postives = 221/324 (68.21%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEF DPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           R+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+DGHWARDC AG
Sbjct: 61  RHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRSRSYSRGRSYSR 180
           DWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS SRS SR RSYSR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSR 180

Query: 181 SRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSPEEDARRSLS 240
           SRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D             
Sbjct: 181 SRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD------------- 240

Query: 241 PGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSPSPL-------P 300
               D  SP+    SP    +   + G D +GG       ++NG +   SP+        
Sbjct: 241 ----DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVVSPVVGAGGDSS 289

Query: 301 REERSPVND--EDNNGSPRGGSES 309
           +E+RSPV+D  E N  SPR GSES
Sbjct: 301 KEDRSPVDDDYEPNRTSPR-GSES 289

[Close]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match: AT3G53500.2 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-79
Identity = 182/279 (65.23%), Postives = 206/279 (73.84%), Query Frame = 0 

Query: 1   MPRYDDRYGGTRLYVGRLSSRTRSRDLDDLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60
           MPRYDDRYG TRLYVGRLSSRTR+RDL+ LFSRYGRVRDVDMKRDYAFVEFSDPRDADDA
Sbjct: 1   MPRYDDRYGNTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDA 60

Query: 61  RYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGIDGHWARDCKAG 120
           RY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+GRCFNCG+DGHWARDC AG
Sbjct: 61  RYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGSGRCFNCGVDGHWARDCTAG 120

Query: 121 DWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP----SPRRGR--SRSRSYSRGR 180
           DWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP    SPRR R  SRSRSYSRGR
Sbjct: 121 DWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKSRSPRRRRSPSRSRSYSRGR 180

Query: 181 SYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHSLSPPPKAMKRSPTPDERSP 240
           SYSRSRSPV+R++S+E   RS K   RS SP+GR      SLSP  K +  SP   +R  
Sbjct: 181 SYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QSLSPDRKVIDASP---KRGS 240

Query: 241 EEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 260
           + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 241 DYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 269

[Close]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match: AT2G37340.3 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 221.9 bits (564), Expect = 7.3e-58
Identity = 156/283 (55.12%), Postives = 182/283 (64.31%), Query Frame = 0 

Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG 
Sbjct: 1   MKRDYAFVEFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGA 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----S 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    S
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRS 120

Query: 162 PRRGRSRSRSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMK 221
           PRR RS SRS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  
Sbjct: 121 PRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARD 180

Query: 222 RSPTPDERSPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRRE 281
           RSP  D                 D  SP+    SP    +   + G D +GG       +
Sbjct: 181 RSPVLD-----------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----Q 240

Query: 282 ENGYSRSPSPL-------PREERSPVND--EDNNGSPRGGSES 309
           +NG +   SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 241 DNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 248

[Close]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match: AT3G53500.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 219.2 bits (557), Expect = 4.8e-57
Identity = 145/238 (60.92%), Postives = 167/238 (70.17%), Query Frame = 0 

Query: 42  MKRDYAFVEFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGT 101
           MKRDYAFVEFSDPRDADDARY L+GRD  GSRI VE ++G PR   GSR+   RG PPG+
Sbjct: 1   MKRDYAFVEFSDPRDADDARYYLDGRDFDGSRITVEASRGAPR---GSRDNGSRGPPPGS 60

Query: 102 GRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSP---KKLKRGSYSRSP--- 161
           GRCFNCG+DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSP   K  + GSYSRSP   
Sbjct: 61  GRCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSRSPVKS 120

Query: 162 -SPRRGR--SRSRSYSRGRSYSRSRSPVKRDRSLE---RSDK---RSRSPRGRSSPKRHS 221
            SPRR R  SRSRSYSRGRSYSRSRSPV+R++S+E   RS K   RS SP+GR      S
Sbjct: 121 RSPRRRRSPSRSRSYSRGRSYSRSRSPVRREKSVEDRSRSPKAMERSVSPKGRD----QS 180

Query: 222 LSPPPKAMKRSPTPDERSPEEDARRSLSPGNRDSRSP-RGRSRSP---RGRSRSPMDE 260
           LSP  K +  SP   +R  + D     +   R+S SP  G   SP    G+ RSP+D+
Sbjct: 181 LSPDRKVIDASP---KRGSDYDGSPKENGNGRNSASPIVGGGESPVGLNGQDRSPIDD 228

[Close]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match: AT2G37340.2 (arginine/serine-rich zinc knuckle-containing protein 33 )

HSP 1 Score: 205.3 bits (521), Expect = 7.1e-53
Identity = 148/275 (53.82%), Postives = 174/275 (63.27%), Query Frame = 0 

Query: 50  EFSDPRDADDARYSLNGRDVHGSRIIVEIAKGVPRGPGGSREYLGRG-PPGTGRCFNCGI 109
           EF DPRDADDAR+ L+GRD  GSRI VE ++G PR   GSR++  RG PPG GRCFNCG+
Sbjct: 20  EFGDPRDADDARHYLDGRDFDGSRITVEFSRGAPR---GSRDFDSRGPPPGAGRCFNCGV 79

Query: 110 DGHWARDCKAGDWKNKCYRCGERGHIEKNCQNSPKKLKR-GSYSRSP----SPRRGRSRS 169
           DGHWARDC AGDWKNKCYRCGERGHIE+NC+NSPKKL+R GSYSRSP    SPRR RS S
Sbjct: 80  DGHWARDCTAGDWKNKCYRCGERGHIERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPS 139

Query: 170 RSYSRGRSYSRSRSPV-KRDRSLERSDKRSRSPRGRSSPKRHSLSPPPKAMKRSPTPDER 229
           RS SR RSYSRSRSPV +R+RS+E   +RSR      SPKR   S  P+A  RSP  D  
Sbjct: 140 RSLSRSRSYSRSRSPVRRRERSVE---ERSR------SPKRMDDSLSPRARDRSPVLD-- 199

Query: 230 SPEEDARRSLSPGNRDSRSPRGRSRSPRGRSRSPMDEGEDFNGGGSRNYRREENGYSRSP 289
                          D  SP+    SP    +   + G D +GG       ++NG +   
Sbjct: 200 ---------------DEGSPKIIDGSPPPSPKLQKEVGSDRDGGSP-----QDNGRNSVV 259

Query: 290 SPL-------PREERSPVND--EDNNGSPRGGSES 309
           SP+        +E+RSPV+D  E N  SPR GSES
Sbjct: 260 SPVVGAGGDSSKEDRSPVDDDYEPNRTSPR-GSES 259

The following BLAST results are available for this feature:
BLAST of CsaV3_5G006510 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143594.11.6e-168100.00serine/arginine-rich splicing factor RS2Z32 isoform X2 [Cucumis sativus] >XP_004... [more]
XP_008445806.16.2e-168100.00PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X2 [Cucumis ... [more]
XP_011654929.15.5e-16491.69serine/arginine-rich splicing factor RS2Z32 isoform X1 [Cucumis sativus] >XP_011... [more]
KAA0034024.12.1e-16391.67serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis melo var. m... [more]
XP_008445803.12.1e-16391.67PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Cucumis ... [more]
BLAST of CsaV3_5G006510 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VYA54.3e-7959.57Serine/arginine-rich splicing factor RS2Z33 OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q9FYB72.1e-7865.23Serine/arginine-rich splicing factor RS2Z32 OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q3T1063.7e-2240.41Serine/arginine-rich splicing factor 7 OS=Bos taurus OX=9913 GN=SRSF7 PE=2 SV=1[more]
Q166291.2e-2039.59Serine/arginine-rich splicing factor 7 OS=Homo sapiens OX=9606 GN=SRSF7 PE=1 SV=... [more]
Q231211.6e-2033.84Probable splicing factor, arginine/serine-rich 1 OS=Caenorhabditis elegans OX=62... [more]
BLAST of CsaV3_5G006510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS317.9e-169100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177110 PE=4 SV=1[more]
A0A1S3BDJ73.0e-168100.00serine/arginine-rich splicing factor RS2Z32-like isoform X2 OS=Cucumis melo OX=3... [more]
A0A1S3BD241.0e-16391.67serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo OX=3... [more]
A0A5A7SS391.0e-16391.67Serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Cucumis melo var.... [more]
A0A6J1CET75.0e-15590.27serine/arginine-rich splicing factor RS2Z32-like isoform X1 OS=Momordica charant... [more]
BLAST of CsaV3_5G006510 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37340.13.1e-8059.57arginine/serine-rich zinc knuckle-containing protein 33 [more]
AT3G53500.21.5e-7965.23RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G37340.37.3e-5855.12arginine/serine-rich zinc knuckle-containing protein 33 [more]
AT3G53500.14.8e-5760.92RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
AT2G37340.27.1e-5353.82arginine/serine-rich zinc knuckle-containing protein 33 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 12..77
e-value: 2.0E-19
score: 80.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 13..74
e-value: 6.6E-15
score: 54.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 11..81
score: 17.216459
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 102..118
e-value: 2.9E-4
score: 30.1
coord: 124..140
e-value: 0.0022
score: 27.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 123..139
e-value: 1.8E-4
score: 21.4
coord: 102..117
e-value: 2.1E-6
score: 27.6
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 102..117
score: 10.147202
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 124..140
score: 10.575755
NoneNo IPR availableGENE3D4.10.60.10coord: 94..121
e-value: 1.6E-6
score: 29.6
coord: 122..162
e-value: 8.0E-6
score: 27.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..309
NoneNo IPR availablePANTHERPTHR23147:SF152SERINE/ARGININE-RICH SPLICING FACTOR RS2Z33coord: 6..290
NoneNo IPR availablePANTHERPTHR23147SERINE/ARGININE RICH SPLICING FACTORcoord: 6..290
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..87
e-value: 1.5E-22
score: 81.6
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 95..141
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 9..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G006510.1CsaV3_5G006510.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding