CsaV3_5G003670 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G003670
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein cornichon homolog 4-like
Location	chr5: 2361335 .. 2364281 (-)
RNA-Seq Expression	CsaV3_5G003670
Synteny	CsaV3_5G003670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATGCTTGGAATGCATCCCATTAAATTTGATTGTTTGTCACATGTCAAATTCACTTTTTTTTAAAAAAATATTTTTATTTGAAGAGTTTTTAGGTGCATTTAGGGCGACAACTATTTTTCCACATCTTACAAAACTGTCCAATCAAACGTTGCGACGGTGGCAAATTCTGCATTTTTCTTGAAATTTTCTAGTGATTTTTTAAAATTCATTAATGTAAGTGAATAGGTATCTTAGAATGGATCAAAGTATTACTATTTCATCCTTTAGGTTTGTTGTGATTATTGATTAAAGTAGGATGATACATCTTGTCCAAAAAAAAAAAAAGAAAATGCCACGTGGGAGTGTTGAATCGATTAGAGGTGCTAAAAAACAAAGTTTGAAAGGACCCAAATGCAACTAAAAATAAATTTGAGGACGAGAAATATACTTTTGTGTGGACTATAAAAGAAAATGGAATCGCCTCTGGAAGAAGAAAGCAGTTTAGAAACTTCAAGCACTTCTGTTTCAGAAGACGAAAAAATCAAAAAAAGAAAAAAAAGGAAAAAAAGGAAAAAAAAGGAAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAAAGAGGTGGTGTTGAGAGCCTGCCGTCGCCTTGAGAAAATTTAATCATCCCGATGCGATCGGTCGTTTGCACCCAGGAATTTGTCTCCGGCGCCGTTCACTCTGCATATTTCTTTTAAACTCCTTCACCACCTCCTTCAATTCATTTCCCCTGCCGCCGGCGCGTGTATTTCCGATGGCCATATTGCGGCATTGAGGTTGATTTCAAATCAAACACACAGGGAGCAAGTGGAGACACAGACACACAAGTTTAGGGCATTACTATGGCTGATATCTACGTCTGGCTCCTCTCCTTCTTTTTTATCATTGCCCTTCTCATGCTTGTCGTTTTTCAGGTTCTCTCTAAACCCTAGAATTTCTGTTTTTATAACCATTTCCTTCACTTTTTTTCTCTTGATTTGTTATAACTAAATTACTCGATGATGGAAATCTTCTGGCTTATTATATATGTTTATTGGGTTAGTTCTGTAGAATTGATGTCTTAATTCTCCAAGTATGTCTTATATATGAATATTTGAATTAGCATATATTGTTGTTAATTGCCTAATATCATTGGTGAAAGTGAAACAATGTTGGAACTATGGAACTTATGATACTTTTGAAACTTGTTGCAGCTAATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTAAGTTTCTCTATTTCTTTCGTCTTTGATCGGACTTTTTACTATTAGAGATATAGATGCATAATATTTAGTGGGCTGTACGTACTATCCTCATGTTGGTTCCCAATTTGAGCTATCTGAATTTCATATTCTATCCTCTGGATTCCAAATGAAAAATGAAATGTGTATATTTTGAATGAAGGGGCTTGCCTATCTCTTCTTATATGCCCGGGTAAGTTGGTAACACTTAGTAGCCAAGTCCTGTTGAGTGGATAGCGGGTGAAAGCATCTAAGTACTGAATTTTACAACCTTTCCTTTTAAATGTATGAATTGCTTCAAGGGTAATTGCAGTGGTAACACTTTTAGGGATAATAATTTAGTGTATGGTAACATTTATAAAGAATTAGAAATATAACAAAATCTATTAGTGATATACTATATCGTTGATAGATTTCTACCAGTGATATGGTCTATTATTGATAGACTCCCACCAATGATGTGGTTTATCATTGATACTCTTTGGGAACTAGATCTAAATTTTGCCATATTTTCAAATTATTTTGTGTTGTGCTATATCTACAAATACTTTGGAACTAATTGCTACATTTGCAATTGTCAAAGCACCTAAAATTTCTGAGATTTAGATTAATAGTGTTAGTTTTCAGATAAGTTAATCTTTTGGGATGGTTAAGAATGTAAAGGACTAGGGACGTCTCATGGACAATCCCTTTGAACTTTCATACTACAGTTCTGTGACTGGAACTTGAATGGATATCATTTGAGATAAGCCAAACTTTCGTATTTGAGATTGGGTTGGTGCACGTATGGTTTATTACGTGACTTGTTTGTTGTTGGTAATTCTTCATGCCAACTTAAATCCGTCTAATGTGTGTTTTCTCATGATTTAGGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTAATCCAATTGAAGAGAGCGTTTTCAAAGTTTGAGATCTTATTGTTGACATCATTTGTTTTAATCATTGTCTTCTCTCTTCTTTGTTTCTCCAATTTGCAGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGAATAGATTCTGCAAAGTGCAAATTGTTGTCTTGTAGGAGATAATGCCACTGTGCGGCTCACTACAAAGCTTTGTGTAAAACTTGTCTTAGGGTATCTTCTTTGTGTTGTAATTTTTGACAAATAATTGCCTTGTGAGTAAGGTCTAAAGGTTTTGATAGCCACCAAATGCTGCCCCTGTTTTGCAGTGATGTCTATAAACGAAAATTTTAAAAACTATAAAGATGAGATTCTTGTTACGTTTAGAGAAAGCCTTTAACATGATGTAAGAGAATAGAGTTTGTTTATGGACCGAAGACGTATTTGCATTTGTCAAAAAAATCGCTTTTTTATGTTAATTATGTAAGAATTTTAGGAAGAATTTAGTTCAAATAATAATAATGCATAAAAGAATACTTGCACCAA

mRNA sequence

ATGGCTGATATCTACGTCTGGCTCCTCTCCTTCTTTTTTATCATTGCCCTTCTCATGCTTGTCGTTTTTCAGCTAATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGA

Coding sequence (CDS)

ATGGCTGATATCTACGTCTGGCTCCTCTCCTTCTTTTTTATCATTGCCCTTCTCATGCTTGTCGTTTTTCAGCTAATGTGCCTAGCTGATCTTGAGTTTGATTATATCAACCCTTACGACTCCTCATCACGGATAAACAAAGTAGTTGTGCCTGAGTTCATCACCCAAGGAGTCTTGTGCATCTTCTATCTCTTGTCAGGGCATTGGGTTATGTCATTATTGTGTATGCCGTGCCTTTATTATAATTTACGAATGTACACTCAACGAAAACACTTGGTAGATGTTACTGAGATATTTAATCAGTTACCTTGGGAAAAGAAGCAAAGGCTTTTCAAACTTGTCTATCTTGTTTCTCTTCTCTTTCTTTCCATATTTTGGTTAATTTACAGCGCGTTGGAGGATCACGAGTCTTGA

Protein sequence

MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHES*

Homology

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BLAST of CsaV3_5G003670 vs. NCBI nr
Match: XP_004147569.1 (protein cornichon homolog 4 [Cucumis sativus] >KGN50189.1 hypothetical protein Csa_000315 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 8.6e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

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BLAST of CsaV3_5G003670 vs. NCBI nr
Match: XP_008437159.1 (PREDICTED: protein cornichon homolog 4-like [Cucumis melo])

HSP 1 Score: 267.3 bits (682), Expect = 7.3e-68
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLLSGHWVMSLLCMPCLYYNL+MYTQR HLVDVTEIFNQLPWEKKQRLFKLVYLVSLL
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLKMYTQRNHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

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BLAST of CsaV3_5G003670 vs. NCBI nr
Match: XP_038907022.1 (protein cornichon homolog 4-like [Benincasa hispida])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 130/137 (94.89%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLVLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLLSGHW+MSL C+P LYYNLR+YTQRKHLVDVTEIFNQLPWEKKQRLFKL+YLVSLL
Sbjct: 61  IFYLLSGHWIMSLFCIPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLIYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

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BLAST of CsaV3_5G003670 vs. NCBI nr
Match: XP_022996131.1 (protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein cornichon homolog 4-like [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 4.9e-64
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLL+GHW+MS  C+P LYYNLR+YTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SLL
Sbjct: 61  IFYLLTGHWIMSFFCLPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

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BLAST of CsaV3_5G003670 vs. NCBI nr
Match: XP_023532889.1 (protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >KAG6606147.1 Protein cornichon-like 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.2 bits (648), Expect = 6.4e-64
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLL+GHW+MS  C+P LYYNLR+YTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SLL
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

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BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-53
Identity = 98/136 (72.06%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M DI+ WL+SFFF+IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           +FYLL+GHW M+LLC+P LYYN  +Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFW+IYSAL+D+E
Sbjct: 121 FLTIFWMIYSALDDYE 136

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BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 7.4e-47
Identity = 87/136 (63.97%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M +++ W++SF  +I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           +FYL++GHW M+LLC+P LYYN  +Y++++HL+DVTEIFN L WEKK+RLFKL Y++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFWLIYS L+D+E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

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BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-46
Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 137
           N  +Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 6.2e-38
Identity = 70/134 (52.24%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M D+  W++SF F+  L+++V++QL CLADLEFD INPYD SSRIN++V+PEF  QG+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           ++Y+L+GHW M++L +P L+YN+R+Y +R+HL DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

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BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.9e-28
Identity = 61/138 (44.20%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 3   DIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIF 62
           D+++W++SFF  +AL+  V +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFL 122
           +LL+ HWV  L+ +P   Y+  +Y +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHE 137
            +F L    +YS  ED +
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

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BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL
Match: A0A0A0KMS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL
Match: A0A1S3ATW1 (protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-68
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLLSGHWVMSLLCMPCLYYNL+MYTQR HLVDVTEIFNQLPWEKKQRLFKLVYLVSLL
Sbjct: 61  IFYLLSGHWVMSLLCMPCLYYNLKMYTQRNHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL
Match: A0A6J1K131 (protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.4e-64
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLL+GHW+MS  C+P LYYNLR+YTQRKHLVDVTEIFNQLPWEKK+RLFKLVYL+SLL
Sbjct: 61  IFYLLTGHWIMSFFCLPYLYYNLRLYTQRKHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL
Match: A0A6J1E8A9 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.0e-64
Identity = 126/137 (91.97%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFF IIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFIIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVMPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLL+GHW+MSL C+P LYYN+R+YTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSL+
Sbjct: 61  IFYLLTGHWIMSLFCVPYLYYNIRLYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLI 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDHES
Sbjct: 121 FLSIFWLIYSALEDHES 137

[Close]

BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL
Match: A0A6J1H2W0 (protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 124/137 (90.51%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           MADIYVWLLSFFFIIALL+LVVFQLMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC
Sbjct: 1   MADIYVWLLSFFFIIALLILVVFQLMCLADLEFDYINPYDSSSRINKVVIPEFITQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           IFYLL+GHW+MS  C+P LYYNLR+YTQR+HLVDVTEIFNQLPWEKK+RLFKLVYL+SLL
Sbjct: 61  IFYLLTGHWIMSFFCVPYLYYNLRLYTQREHLVDVTEIFNQLPWEKKRRLFKLVYLISLL 120

Query: 121 FLSIFWLIYSALEDHES 138
           FLSIFWLIYSALEDH+S
Sbjct: 121 FLSIFWLIYSALEDHDS 137

[Close]

BLAST of CsaV3_5G003670 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-54
Identity = 98/136 (72.06%), Postives = 122/136 (89.71%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M DI+ WL+SFFF+IAL+ ++V+QL+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC
Sbjct: 1   MGDIWTWLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           +FYLL+GHW M+LLC+P LYYN  +Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  L
Sbjct: 61  VFYLLTGHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFW+IYSAL+D+E
Sbjct: 121 FLTIFWMIYSALDDYE 136

[Close]

BLAST of CsaV3_5G003670 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-48
Identity = 87/136 (63.97%), Postives = 115/136 (84.56%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M +++ W++SF  +I LL L+V+QL+ LADLEFDYINPYDS+SRIN VV+PE I QG LC
Sbjct: 1   MGEVWTWIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           +FYL++GHW M+LLC+P LYYN  +Y++++HL+DVTEIFN L WEKK+RLFKL Y++  L
Sbjct: 61  VFYLVTGHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTL 120

Query: 121 FLSIFWLIYSALEDHE 137
           FL+IFWLIYS L+D+E
Sbjct: 121 FLTIFWLIYSTLDDYE 136

[Close]

BLAST of CsaV3_5G003670 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-47
Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 22  VFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIFYLLSGHWVMSLLCMPCLYY 81
           +F L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+FYLL+GHW M+LLC+P LYY
Sbjct: 14  IFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLPYLYY 73

Query: 82  NLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFLSIFWLIYSALEDHE 137
           N  +Y++R+HLVDVTEIFN L WEKK+RLFKL Y+V  LFL+IFW+IYSAL+D+E
Sbjct: 74  NFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSALDDYE 128

[Close]

BLAST of CsaV3_5G003670 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-39
Identity = 70/134 (52.24%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MADIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLC 60
           M D+  W++SF F+  L+++V++QL CLADLEFD INPYD SSRIN++V+PEF  QG+LC
Sbjct: 1   MGDLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLC 60

Query: 61  IFYLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLL 120
           ++Y+L+GHW M++L +P L+YN+R+Y +R+HL DVTE++N   WE+K+R++K+ ++   +
Sbjct: 61  LYYILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSI 120

Query: 121 FLSIFWLIYSALED 135
           F++ +WLI+SAL D
Sbjct: 121 FITTYWLIHSALGD 134

[Close]

BLAST of CsaV3_5G003670 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29
Identity = 61/138 (44.20%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 3   DIYVWLLSFFFIIALLMLVVFQLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIF 62
           D+++W++SFF  +AL+  V +Q++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+ 
Sbjct: 4   DLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSLCLL 63

Query: 63  YLLSGHWVMSLLCMPCLYYNLRMYTQRKHLVDVTEIFNQLPWEKKQRLFKLVYLVSLLFL 122
           +LL+ HWV  L+ +P   Y+  +Y +R++L+DVTE+F  + +EKK R  KL + V L  +
Sbjct: 64  FLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFLFIM 123

Query: 123 SIFWL----IYSALEDHE 137
            +F L    +YS  ED +
Sbjct: 124 VVFRLTLSAVYSFTEDDD 141

The following BLAST results are available for this feature:

BLAST of CsaV3_5G003670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147569.1	8.6e-69	100.00	protein cornichon homolog 4 [Cucumis sativus] >KGN50189.1 hypothetical protein C...	[more]
XP_008437159.1	7.3e-68	98.54	PREDICTED: protein cornichon homolog 4-like [Cucumis melo]	[more]
XP_038907022.1	1.5e-65	94.89	protein cornichon homolog 4-like [Benincasa hispida]	[more]
XP_022996131.1	4.9e-64	91.97	protein cornichon homolog 4-like [Cucurbita maxima] >XP_022996132.1 protein corn...	[more]
XP_023532889.1	6.4e-64	91.97	protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo] >XP_023532890.1 pr...	[more]

BLAST of CsaV3_5G003670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84W04	5.3e-53	72.06	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	7.4e-47	63.97	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	2.1e-46	73.91	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	6.2e-38	52.24	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]
Q9C7D7	5.9e-28	44.20	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]

BLAST of CsaV3_5G003670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMS0	4.2e-69	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157960 PE=3 SV=1	[more]
A0A1S3ATW1	3.5e-68	98.54	protein cornichon homolog 4-like OS=Cucumis melo OX=3656 GN=LOC103482667 PE=3 SV...	[more]
A0A6J1K131	2.4e-64	91.97	protein cornichon homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491445 PE=...	[more]
A0A6J1E8A9	4.0e-64	91.97	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430316 P...	[more]
A0A6J1H2W0	1.2e-63	90.51	protein cornichon homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111459200 P...	[more]

BLAST of CsaV3_5G003670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12390.1	3.7e-54	72.06	Cornichon family protein	[more]
AT1G62880.1	5.2e-48	63.97	Cornichon family protein	[more]
AT1G12340.1	1.5e-47	73.91	Cornichon family protein	[more]
AT4G12090.1	4.4e-39	52.24	Cornichon family protein	[more]
AT3G12180.1	4.2e-29	44.20	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 4..125 e-value: 1.5E-58 score: 210.5
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..125 e-value: 2.6E-42 score: 144.0
None	No IPR available	PANTHER	PTHR12290:SF39	PROTEIN CORNICHON HOMOLOG 4-LIKE	coord: 1..135
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G003670.1	CsaV3_5G003670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport