CsaV3_5G002650 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G002650
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	RING-type domain-containing protein
Location	chr5: 1620832 .. 1624667 (+)
RNA-Seq Expression	CsaV3_5G002650
Synteny	CsaV3_5G002650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAATGGAATCAAATAAACCTAAACCAAACACGTTTTGTTAAAGATATGAACAAAATTGTATCAATTTATTCCATTTTGATATGTGAGCCGAATTTTCAGTCCTCCAGCGGCGGCCGTTAGAAGTTGAACTTTCACTCTCCGGCGGTGACCGTAACCTAGAGGACCAAAACTTTGATTTTCCATTCATCCAAACAGAAAACAAATCTCAAGGAAAACTGTTTGTTATTAATTTATCAAATTGTTTTTGTTTGTTTTACTTTTGATTCTTCTTCTCCTGACCTTTATACTCAGTGGAGAGTCGTACTCGCGCACGAAAACAAACCAAAACATTCTCTCTCTCTAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGCTTTTTCTGAGCCTTCTCTGCTTCCCTGCCATAGCCTGAACCGAAAGAGGAACGTTCTGAAAAGGAGTCAACCGAGCTGTGACTTCTCTATTCTTCAATTTGAATTCAATTCTCAATCGCTTTTTTACGAATCGATTGAGTTCAGCGCGAACCGGTAAGGTTCCAGTTCCTAGACTCTATATCTGTTCTTTTTTCAATTTGATTCTGGTGACTGTTGCTTGATCAGAAGCTAAAATCATGTATTCGTGAGTTTATTTGGCTGTTTGTATTGATTTTTTTGGAGCTGAGGTGGTTTTGGATTCTCCGGATTATTTTTCTGTCGGTTTTACTTTGATTATGTATTTGTTTGATTTACTTGTTTGCATCCGTTTGGAATTTTATCGGTATTTAATTGAGAATACGATCTTTTCGGCTTCTTGTTACTTTGTTGTTGTCATGTTATCGCTTGAGTTCTTCTTTGCATTGACGCTGGTCTAGTTTGCTTTATTGGATTCATTGTTGCTTCGGTATGATAAATGAATATATTGTTGTGATTTCATTTTAGAGTTCTTGAGATTCATAATGGATAATTGAAGATGATTCTGTCTGTACTCGGGGCTATATTTGTTCTTTAGAATTAATTTCTTCCTCTTTTAGTTTCATTCGGTCCTCTAATTACGATCAATTGGTTCAAATGATAGAAGGTTTCAAGATGTAATGCTCCTCTTTAGCTAGCTACGGGAGCTGAATTCTTTAGCGGAAAATGGCTTTTCCCCTCAGATTCATGCTTTATTGAACTACTTTTTTTGCTCTTTCCTTCATTTACGGTCTCGCAACATTCCCGTTTCCTTCGACAAAACTAATAAAATAAATATGAAGAACAAATATCATTTTTGTTTGCTCCTTGTTTAGGTTCTAGTTATAATTCTTAGTGAGATTTTCAACTCCAATGTTGAGTATAAACTAGGTCACTGTGTACTTCTTCCAATGATAATCTATGTTTATTTCATCATATTTGCCACTAGCTTTTGTTAATCTGTGATTCTCTGACCAAATTTTCAATTATCTCTTGTCATATACACTTGTAGACCTGTCATGTCATGTCTCCTAATGAAGTTTTTTATTTTTCATAAACTGCAGTCACATTGATTTATAATGTTTTCTGTATCAGGGTTGAGAGTGACATTGCGACTTCTACCAATGGTTTTCTGGTGTGTCTTGTAGATAAGAAAGCTGAAATGGGAGGTTGCTGCTGCTGTTCTTCGAAAGGAACAGAATCAAATATTGCACCAGGCTACTATTATGTTAGTATTGATTTCTTCATTTTATGCTCCGGTGTACCCTTGTGAGATGATTAATGTAAGTTACATCAGTTGAAGCCCAAAACTGAAAATTGATTGCAACGTGAGACTCGAGAGTGAATTCTGAAAAGTAATTCTGTACATTTTTTGGTATAATTCAGCATCTCTATGTTTGCTGTAGTAGTCATCTGCCTTAGCATAAATCAACTTAGATTGGGTGTTATCATGGGAGATGCTTGTGAACTAAATTTGAATAGATCATGTAAGTTGCGAATTTCAATTTAAGTGATTCTAGCGAATACACTCGAAGGCTATAGTTTCTGTTATTTGATCTTGGAACTGGTTGAGATTTATGGTTTTGTTAGCCATCATGGTGGAAAAAAGTTTCTTTCCACTGTCAACTTCCTTGCTGAAATCTCAATTAATATGAATCTAAGTTTTGAACTTTTAATGCAGTACCCAAGAGCATCGGAGGAACATGTTCCTTTGTCACCACTTAGAACTCCCCGAGAATTTTCAACAGGGCTTTTAGTTGATACAAATCTAGATACATCAATCCCGGACACTTATAGATCACCTCCATTGCCTATGCCATATGATGTTGTTTTAACAAGTCCACTTACTCCACCTGTGGTTCAAGAAATTAGCTGCTATAAGAATGAAGCTGCAGCTCAGACAACAAATTCCAATACAATTCAAGAAACAGCATGCATAAATACTCGGGAAACATCAGCCAAATGTGAAGGCGTCGATGAATCAGATTGCAAGAAGCATACAGATTTTGAAGTGGACGCATTAAAGGAATCTGAAAATGAACTTTCAAAGGGTGTAGAATCTGCTGTCCTACCCATTGAAGAAGAGGATGTTTGCCCCATCTGTTTGGAAGGTGAAGTTTTGTCAAAACTTTGTTTAGCTGCCTTATACCAACCCACCAAACCAATGAACTTTTATTAAACCTCTTATATGTCTATTGCCAATGTTTGACATTTTAGTTGTTTAAACTAACAAGTTTCCGCATCAATGCTTTCTCGATAGCTGCACAGTACCATGCTCCGTTCCATTTTAATTGCTTGGATTTACAAGTCACCTACTTATCAGTTTCTGTTGTTTTGTGCAGAATATGATGGAGAGAACCCAAAACTTACCACAAAATGCGAACATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTCTGCGATCAGGTGTGCGTTACTTTATGTTTTTTTAATTTATCACTTATGAAAAAACATTAGGCATTCCACCTTCTAAAACCTAACACTACTTTTTTTCTATTATTTGACACACAATAATTTTAACATGTCTATTACGAATATTCCCCCTTAGAATTGATAACCCGCTTAAATCCTAATACAACTTTGCTTTATAGTTAGTTTAGCACCATTTCGAGAAAGAATCTAAATCTCGTAGTGCCCTAAGAGGACCTATTTGGACGTAGGGAATTAGAAGATAATTAGGGTATATGTACTCCAGTTTAGTATTTGTTTAGTTGTTAATTAATATCTTAGAATTGATTAGTTAATCATCTTATATCCTAATTATCTCCTCCTGAAATGCAGGAAATGGTTTTTAGCTCTCCAATTGATTAGTGGGAAGAAGAAAGTCAGGCAAGTGTTTTTTTCTCATATTGAAAGTAAAGTTGAAAGTATAGGTTATAAAGTCTTTTTCGTGATTTTGCGTCCAGTAGTTGTTTTCTCTCTCTCTCTCTTTTTTTTTCTTTCATTAATGAGTGGTTCATTCCTGATTGCACTTTTCTGTGTGAATTTGTTCTCTGAACATAGAATGGGGGGAAAATTGGGAGAATGCTTTTTTTTTTCTTTTGGTGGGAGGATGTAAATACAGTTGTGGAAATATAGTTATATTTGAGCTTGGTTTTTCATTTTACTTCCATTTATTATAGGGTTGTTACTATTTGTCATAAATGGAATTAAAATGAAGAAAAAAGAATAGTAATTCTTAATTTTCTCTTAAATATTTCTAGGTCCTTGTTGCAAATTATCTTAGCTTTTTAAATCTTTGTGTTTTCGTTTTTCAATTTTAATTCCTCATTTTTCTTCTTTACAAAGATATTTAGAATTTAGTCTATAAACCATATAGTTAGAATTCGATTCCTGTAGTTTGATAAAACC

mRNA sequence

ATGGGAGGTTGCTGCTGCTGTTCTTCGAAAGGAACAGAATCAAATATTGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAACATGTTCCTTTGTCACCACTTAGAACTCCCCGAGAATTTTCAACAGGGCTTTTAGTTGATACAAATCTAGATACATCAATCCCGGACACTTATAGATCACCTCCATTGCCTATGCCATATGATGTTGTTTTAACAAGTCCACTTACTCCACCTGTGGTTCAAGAAATTAGCTGCTATAAGAATGAAGCTGCAGCTCAGACAACAAATTCCAATACAATTCAAGAAACAGCATGCATAAATACTCGGGAAACATCAGCCAAATGTGAAGGCGTCGATGAATCAGATTGCAAGAAGCATACAGATTTTGAAGTGGACGCATTAAAGGAATCTGAAAATGAACTTTCAAAGGGTGTAGAATCTGCTGTCCTACCCATTGAAGAAGAGGATGTTTGCCCCATCTGTTTGGAAGAATATGATGGAGAGAACCCAAAACTTACCACAAAATGCGAACATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTCTGCGATCAGGAAATGGTTTTTAGCTCTCCAATTGATTAG

Coding sequence (CDS)

ATGGGAGGTTGCTGCTGCTGTTCTTCGAAAGGAACAGAATCAAATATTGCACCAGGCTACTATTATTACCCAAGAGCATCGGAGGAACATGTTCCTTTGTCACCACTTAGAACTCCCCGAGAATTTTCAACAGGGCTTTTAGTTGATACAAATCTAGATACATCAATCCCGGACACTTATAGATCACCTCCATTGCCTATGCCATATGATGTTGTTTTAACAAGTCCACTTACTCCACCTGTGGTTCAAGAAATTAGCTGCTATAAGAATGAAGCTGCAGCTCAGACAACAAATTCCAATACAATTCAAGAAACAGCATGCATAAATACTCGGGAAACATCAGCCAAATGTGAAGGCGTCGATGAATCAGATTGCAAGAAGCATACAGATTTTGAAGTGGACGCATTAAAGGAATCTGAAAATGAACTTTCAAAGGGTGTAGAATCTGCTGTCCTACCCATTGAAGAAGAGGATGTTTGCCCCATCTGTTTGGAAGAATATGATGGAGAGAACCCAAAACTTACCACAAAATGCGAACATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCTGTCTGCGATCAGGAAATGGTTTTTAGCTCTCCAATTGATTAG

Protein sequence

MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGVDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSPID*

Homology

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BLAST of CsaV3_5G002650 vs. NCBI nr
Match: XP_004143894.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucumis sativus] >KAE8647854.1 hypothetical protein Csa_000637 [Cucumis sativus])

HSP 1 Score: 439.5 bits (1129), Expect = 1.6e-119
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY 60
           MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY 60

Query: 61  RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV 120
           RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV
Sbjct: 61  RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV 120

Query: 121 DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH 180
           DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH
Sbjct: 121 DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH 180

Query: 181 HFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 181 HFHLACILEWMERSDICPVCDQEMVFSSPID 211

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BLAST of CsaV3_5G002650 vs. NCBI nr
Match: XP_008437308.1 (PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis melo] >KAA0042742.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 414.8 bits (1065), Expect = 4.3e-112
Identity = 202/212 (95.28%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL SPLRTPR FSTGLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPYDVVLTSPLTPPV QEI  YKNEAAAQT NSNTIQETACINTRE SAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEG 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           VDESDCKKHTDFEV+ LKESE ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE
Sbjct: 121 VDESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HHFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212

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BLAST of CsaV3_5G002650 vs. NCBI nr
Match: XP_038876112.1 (probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876115.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 7.2e-107
Identity = 195/212 (91.98%), Postives = 197/212 (92.92%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAP YYYYPRASEEHVPL SPL TP  FS GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKRTESNIAPSYYYYPRASEEHVPLSSPLSTPPAFSRGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPYDVVLTSPLTPPV QEI   KN+AAAQTTN +TIQETACINTRETSAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVAQEIGSNKNDAAAQTTNPDTIQETACINTRETSAKCEG 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           VDESDCKKHTDFEVD LKESE ELSKGVES VLPIEEEDVCPICLEEYDGENPKLTTKCE
Sbjct: 121 VDESDCKKHTDFEVDTLKESEIELSKGVESMVLPIEEEDVCPICLEEYDGENPKLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HHFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212

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BLAST of CsaV3_5G002650 vs. NCBI nr
Match: XP_022970099.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 187/213 (87.79%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPL SPL  P  F  GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCEG
Sbjct: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120

Query: 121 V-DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           + DESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           EHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 EHHFHLACILEWMERSDICPVCDQEMVFSPPID 213

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BLAST of CsaV3_5G002650 vs. NCBI nr
Match: KAG6579518.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 3.4e-101
Identity = 189/214 (88.32%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MGG-CCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPD 60
           MGG CCCCSSK TESNIAPGYYYYPRASEEHVPL SPL  P  F  GLLVDTNLDTSIPD
Sbjct: 1   MGGCCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLSAPPAFPMGLLVDTNLDTSIPD 60

Query: 61  TYRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCE 120
           TYRSPPLPMPYDVVLT P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCE
Sbjct: 61  TYRSPPLPMPYDVVLTHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCE 120

Query: 121 GV-DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTK 180
           G+ DESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTK
Sbjct: 121 GIDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTK 180

Query: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           CEHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 CEHHFHLACILEWMERSDICPVCDQEMVFSPPID 214

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BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-38
Identity = 94/212 (44.34%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGG CC SS+ +     P YYY P + EE VP  +       F+TGLLVD  L+TSIPDT
Sbjct: 1   MGG-CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           +   P P+PYD++L  P                  Q T+S +I+     ++ ET A CE 
Sbjct: 61  F-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           + ESDCK      +  L   +++ SK     +L  EEED CPIC E+YD ENP+LTTKCE
Sbjct: 121 LGESDCKTLASSVI--LSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           H FHL+C+LEW+ERSD CP+CD+E+VF   ++
Sbjct: 181 HEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190

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BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.8e-19
Identity = 71/205 (34.63%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 3   GCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTYRS 62
           GCCCC     ES+         R  +EH+PLS   TP              +S+ + Y S
Sbjct: 2   GCCCCLPSIPESS---------RTIDEHLPLS-RATP--------------SSLSNAYSS 61

Query: 63  PPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGVDE 122
           P           SP  P  +  I+   +      T  N+ + +  +       K   VD+
Sbjct: 62  P----------LSPPIPLAITNINLQTSPPKLPRTQGNSSEASPGLTQVVPEKKTWHVDD 121

Query: 123 SDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEHHF 182
                 TDF          EL K    A+      D CPICLEEY+ +NPKL TKC H F
Sbjct: 122 L-----TDF----------ELKKQYREAI------DECPICLEEYEIDNPKLLTKCGHDF 151

Query: 183 HLACILEWMERSDICPVCDQEMVFS 208
           HLACIL WMERS+ CPVCD+E+V +
Sbjct: 182 HLACILAWMERSEACPVCDKELVLT 151

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BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 54/159 (33.96%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 53  DTSIPDTYRSPPLPMPYDV--VLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINT 112
           D  + + +RS P P+PYD        L     +  S    E     ++S+   E+  +  
Sbjct: 70  DNFLSEAFRSTPRPLPYDADPRYFRSLVSRREKGSSHSHEEVEPLRSDSDADSESFGVGG 129

Query: 113 RETSAKCEGVDESDCKKH--TDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYD 172
            + +     + + D K+   +   +  L+     +    E+  +  E+EDVCP CLEEY 
Sbjct: 130 CKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYILSEDEDVCPTCLEEYT 189

Query: 173 GENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFS 208
            ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F+
Sbjct: 190 SENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFN 228

[Close]

BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-10
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0


Query: 157 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSP 210
           +D C ICLE +  ++P   T C+H +HL CI+EW +RS  CP+C Q  V   P
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDP 95

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BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.5e-10
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 157 EDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVFSSP 210
           +D C ICLE +   +P   T C+H +HL CILEW +RS  CP+C Q +    P
Sbjct: 30  DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDP 82

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BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL
Match: A0A0A0KQV6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152960 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 8.0e-120
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY 60
           MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY
Sbjct: 122 MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSPLRTPREFSTGLLVDTNLDTSIPDTY 181

Query: 61  RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV 120
           RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV
Sbjct: 182 RSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEGV 241

Query: 121 DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH 180
           DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH
Sbjct: 242 DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCEH 301

Query: 181 HFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 302 HFHLACILEWMERSDICPVCDQEMVFSSPID 332

[Close]

BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL
Match: A0A5A7TH60 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002410 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112
Identity = 202/212 (95.28%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL SPLRTPR FSTGLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPYDVVLTSPLTPPV QEI  YKNEAAAQT NSNTIQETACINTRE SAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEG 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           VDESDCKKHTDFEV+ LKESE ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE
Sbjct: 121 VDESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HHFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212

[Close]

BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL
Match: A0A1S3AU90 (E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC103482766 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.1e-112
Identity = 202/212 (95.28%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL SPLRTPR FSTGLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPLSSPLRTPRAFSTGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPYDVVLTSPLTPPV QEI  YKNEAAAQT NSNTIQETACINTRE SAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTSPLTPPVAQEIGSYKNEAAAQTANSNTIQETACINTREASAKCEG 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           VDESDCKKHTDFEV+ LKESE ELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE
Sbjct: 121 VDESDCKKHTDFEVNTLKESEIELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HHFHLACILEWMERSDICPVCDQEMVFSSPID
Sbjct: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212

[Close]

BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL
Match: A0A6J1I4I7 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111469091 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.7e-102
Identity = 187/213 (87.79%), Postives = 193/213 (90.61%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSK TESNIAPGYYYYPRASEEHVPL SPL  P  F  GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKETESNIAPGYYYYPRASEEHVPLSSPLNAPPAFPMGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPY+VVL+ P TPPV QEI   KN+AAAQTTNS+TIQET CINTRETSAKCEG
Sbjct: 61  YRSPPLPMPYNVVLSHPHTPPVAQEICSNKNDAAAQTTNSDTIQETTCINTRETSAKCEG 120

Query: 121 V-DESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKC 180
           + DESDCKKHTDFEVD LKESE ELSKGV+S VLPIEEEDVCPICLEEYDGENPKLTTKC
Sbjct: 121 IDDESDCKKHTDFEVDTLKESEIELSKGVKSVVLPIEEEDVCPICLEEYDGENPKLTTKC 180

Query: 181 EHHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           EHHFHLACILEWMERSDICPVCDQEMVFS PID
Sbjct: 181 EHHFHLACILEWMERSDICPVCDQEMVFSPPID 213

[Close]

BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL
Match: A0A6J1DR88 (probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101
Identity = 181/212 (85.38%), Postives = 189/212 (89.15%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGGCCCCSSKGTESNIAP YYYYPRAS+EHVPL SP+  P  FS+GLLVDTNLDTSIPDT
Sbjct: 1   MGGCCCCSSKGTESNIAPSYYYYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           YRSPPLPMPYDVVLT P TPPV QEI   KN+AAAQTTNS+ +QE AC N RETSAKCEG
Sbjct: 61  YRSPPLPMPYDVVLTHPHTPPVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEG 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           +DESDCKKHTDFE D LKESE ELSKGVES  L IEEEDVCPICLEEYDGENPKLTTKCE
Sbjct: 121 IDESDCKKHTDFETDTLKESEIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           HHFHLACILEWMERSDICPVCDQEM+FS PID
Sbjct: 181 HHFHLACILEWMERSDICPVCDQEMLFSPPID 212

[Close]

BLAST of CsaV3_5G002650 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.3e-53
Identity = 112/216 (51.85%), Postives = 143/216 (66.20%), Query Frame = 0


Query: 1   MGGCCCC-SSKGTESNIAPGYYYYPRASEEHVPLSPL--RTPREFSTG-LLVDTNLDTSI 60
           MGGCCCC SS+  + +  P YYYYPRA+EE VPLS    RT    STG ++VDTNL+TS 
Sbjct: 1   MGGCCCCSSSRRADVDNGPAYYYYPRATEERVPLSSAHNRTSSAISTGVVVVDTNLETSS 60

Query: 61  PDTYRSPPLPMPYDVVLTSPLTPPVVQEISCYK-NEAAAQTTNSNTIQETACINTRETSA 120
           PD Y  PPLP P+DV +  P TP   +E +C    E +  + N+ + QET    T     
Sbjct: 61  PDAYIPPPLPTPFDVPIGIPQTPASGEEATCVDIREVSVDSANTESAQETVDGITLGVPT 120

Query: 121 KCEGVDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLT 180
            C    E+D K  T+ ++++ +E + +LSK V    +PIEEE+ CPICLEEYD ENPKL 
Sbjct: 121 TCSH-KETDSKIQTEIDLESTEEIDPKLSKAV---FIPIEEEEDCPICLEEYDIENPKLV 180

Query: 181 TKCEHHFHLACILEWMERSDICPVCDQEMVFSSPID 212
            KC+HHFHLACILEWMERS+ CPVC++EMVF S +D
Sbjct: 181 AKCDHHFHLACILEWMERSETCPVCNKEMVFDSTLD 212

[Close]

BLAST of CsaV3_5G002650 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 94/212 (44.34%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGG CC SS+ +     P YYY P + EE VP  +       F+TGLLVD  L+TSIPDT
Sbjct: 1   MGG-CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           +   P P+PYD++L  P                  Q T+S +I+     ++ ET A CE 
Sbjct: 61  F-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           + ESDCK      +  L   +++ SK     +L  EEED CPIC E+YD ENP+LTTKCE
Sbjct: 121 LGESDCKTLASSVI--LSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           H FHL+C+LEW+ERSD CP+CD+E+VF   ++
Sbjct: 181 HEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190

[Close]

BLAST of CsaV3_5G002650 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 94/212 (44.34%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGG CC SS+ +     P YYY P + EE VP  +       F+TGLLVD  L+TSIPDT
Sbjct: 1   MGG-CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           +   P P+PYD++L  P                  Q T+S +I+     ++ ET A CE 
Sbjct: 61  F-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           + ESDCK      +  L   +++ SK     +L  EEED CPIC E+YD ENP+LTTKCE
Sbjct: 121 LGESDCKTLASSVI--LSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQEMVFSSPID 212
           H FHL+C+LEW+ERSD CP+CD+E+VF   ++
Sbjct: 181 HEFHLSCLLEWIERSDRCPICDKEVVFDDRLN 190

[Close]

BLAST of CsaV3_5G002650 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 91/203 (44.83%), Postives = 119/203 (58.62%), Query Frame = 0


Query: 1   MGGCCCCSSKGTESNIAPGYYYYPRASEEHVPL-SPLRTPREFSTGLLVDTNLDTSIPDT 60
           MGG CC SS+ +     P YYY P + EE VP  +       F+TGLLVD  L+TSIPDT
Sbjct: 1   MGG-CCSSSRKSHLVGTPVYYYCPESFEELVPSGTRAGVGSAFTTGLLVDIGLETSIPDT 60

Query: 61  YRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEAAAQTTNSNTIQETACINTRETSAKCEG 120
           +   P P+PYD++L  P                  Q T+S +I+     ++ ET A CE 
Sbjct: 61  F-CAPAPLPYDLLLGRP------------------QCTDSESIKGRMSGSSFETLATCED 120

Query: 121 VDESDCKKHTDFEVDALKESENELSKGVESAVLPIEEEDVCPICLEEYDGENPKLTTKCE 180
           + ESDCK      +  L   +++ SK     +L  EEED CPIC E+YD ENP+LTTKCE
Sbjct: 121 LGESDCKTLASSVI--LSPRKSDFSKHQGLKILVDEEEDCCPICFEDYDVENPRLTTKCE 180

Query: 181 HHFHLACILEWMERSDICPVCDQ 203
           H FHL+C+LEW+ERSD CP+CD+
Sbjct: 181 HEFHLSCLLEWIERSDRCPICDK 181

[Close]

BLAST of CsaV3_5G002650 vs. TAIR 10
Match: AT5G38895.1 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21
Identity = 60/174 (34.48%), Postives = 88/174 (50.57%), Query Frame = 0


Query: 33  LSPLRTPREFSTGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTSPLTPPVVQEISCYKNEA 92
           + P+ +  E +T +   T LD S+   Y SPP P+PYD     P     V+  S +  E 
Sbjct: 50  MHPIPSTVETATVMNSTTALDDSLSSVYHSPPTPLPYD---ADPRYFRFVKG-SSHSGEE 109

Query: 93  AAQTTNSNTIQETACINTRETSAKCEGVDESDCKKHTDFEVDALKESENELSKGVESAVL 152
           +        +   A     +  AK    D  D  K   +   +   ++++   G+E    
Sbjct: 110 SEPLRGDTEMSSEA---LGDGGAKWSKSDSEDGSKEV-YTKGSSTFTKSKTMPGIEVYYA 169

Query: 153 PIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMVF 207
             ++ED+CP CL++Y  ENPK+ TKC HHFHL+CI EWMERS+ CPVC + M F
Sbjct: 170 DSDDEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215

The following BLAST results are available for this feature:

BLAST of CsaV3_5G002650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143894.1	1.6e-119	100.00	probable E3 ubiquitin-protein ligase RHB1A [Cucumis sativus] >KAE8647854.1 hypot...	[more]
XP_008437308.1	4.3e-112	95.28	PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Cucumis melo] >KAA0042742...	[more]
XP_038876112.1	7.2e-107	91.98	probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 p...	[more]
XP_022970099.1	1.2e-101	87.79	probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima]	[more]
KAG6579518.1	3.4e-101	88.32	putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subs...	[more]

BLAST of CsaV3_5G002650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIJ8	1.5e-38	44.34	Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q93ZF6	5.8e-19	34.63	E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 ...	[more]
Q8LE94	1.1e-17	33.96	E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g022...	[more]
Q4TU14	5.0e-10	45.28	E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 ...	[more]
Q9ZT42	8.5e-10	45.28	E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 ...	[more]

BLAST of CsaV3_5G002650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQV6	8.0e-120	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152960 P...	[more]
A0A5A7TH60	2.1e-112	95.28	E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3AU90	2.1e-112	95.28	E3 ubiquitin-protein ligase At3g02290-like OS=Cucumis melo OX=3656 GN=LOC1034827...	[more]
A0A6J1I4I7	5.7e-102	87.79	probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DR88	4.8e-101	85.38	probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=...	[more]

BLAST of CsaV3_5G002650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41350.1	1.3e-53	51.85	RING/U-box superfamily protein	[more]
AT4G00335.1	1.1e-39	44.34	RING-H2 finger B1A	[more]
AT4G00335.2	1.1e-39	44.34	RING-H2 finger B1A	[more]
AT4G00335.3	1.3e-37	44.83	RING-H2 finger B1A	[more]
AT5G38895.1	3.8e-21	34.48	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 160..200 e-value: 6.3E-8 score: 42.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 159..200 e-value: 1.3E-11 score: 44.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 160..201 score: 12.061441
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 154..208 e-value: 8.5E-16 score: 59.0
None	No IPR available	PANTHER	PTHR46463:SF37	ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN	coord: 1..211
None	No IPR available	PANTHER	PTHR46463	ZINC FINGER, RING/FYVE/PHD-TYPE	coord: 1..211
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 154..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G002650.1	CsaV3_5G002650.1	mRNA