CsaV3_5G002330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G002330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionLEA_2 domain-containing protein
Locationchr5: 1416612 .. 1417903 (-)
RNA-Seq ExpressionCsaV3_5G002330
SyntenyCsaV3_5G002330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAGACTGACTTTTTATATTAGAAAGATATAGAGAGAGAGAAAAAAAAAAACTTAGGCTGACTTGTGCATTACGATAATGGAGTCTTCCTTCCCAAATGATCAAATTAAATCCCACGACTATTAAATACTCAACATATCCCTTCTTTTGGTGTCATTTCACCATAGCCATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAGTAAGTTTGCAATGACTCTTTTGAAATAACGAAAAGTACTCAAAATTGACCAGTACGGTTATACATGAACGATTATTTCTCTTCAAAGTCATTCTAAACTCGTATTTTCTTTCATATTTCTCAGATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAATGAAAAAGTGAAATCCTATTGAAATTCGTTCAAACAACCTAAATTTTTTAGAATTAAGAAGAATGTGACTAACAAATCTACATTATAGGATTTTGAGATATGAAAACGTATAGTTTGAATATGTGAGATAGTCATGTTAATGTAACAGTATATATTATTAAACTTTTTTATAGTAGAATATTAGGACTTAATATTCATTTTCTGGATCATATTAATTTCTTTCTTTGAGTAAAATTTATGAAACTGCGTTGTAAAGTTATGAAATTATTCGGACAATATTTCCTTATTTCAAATAATAATAGCAAAGCTTTATGACTATTAAAATTTATTGATGAGTTGAAG

mRNA sequence

ATGATCAAATTAAATCCCACGACTATTAAATACTCAACATATCCCTTCTTTTGGTGTCATTTCACCATAGCCATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAA

Coding sequence (CDS)

ATGATCAAATTAAATCCCACGACTATTAAATACTCAACATATCCCTTCTTTTGGTGTCATTTCACCATAGCCATGGCTGATAAAGAGCAGGTCAAACCCTTGGCTTCCGCCTCCGCCGAGCTCCGGAGTGACGACCATATCTTTCTTCCTCCTCCTGATCCCAAGCTCCACCTCCATAGAAACAAATATATCATGTGCTGTGGCTGCTTCGCCGCTCTCCTCTTAATCCTTGCCGTCATCGGTATCGTCCTCGGCTTCACCGTCTTCCATATCAAAACCCCAGATATTAAAATTGATTCCCTCTCCTTCCCAAATGACACTTTGAGTTCAAATAGTGGGATAATTGTTGTGGCTAGCGTCTCGGTGAGGAACCCTAATGTTGCGTCGTTCAAATACTCGAAAGCTTCGATCGAGATTTACTACCACGACAAGGTCATCGGCGAGGGCGAGACACCACCAGGAGAGGTTAAGGCGAAAGACACGCTAAGGATGAATGTGACGGTAGAGATTGAACCTTGGAAGATGGATGATGCTTCGAGTTTGATAAAGGATTGGAATTCAGGATCTTTGAGTATAAGTAGCTACACGGAAATTCCTGGAAGAGTGAAAATACTTGGCTCCATCAAGAAAAACTATTTGGTGAAAATAAGCTGTTCATTGACTTACAATTCAAAAAGCAAGACGATTCAAGGACAAGATTGTGATCAACGTGTAAGAATCTCTGTTTAA

Protein sequence

MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV*
Homology
BLAST of CsaV3_5G002330 vs. NCBI nr
Match: KAE8647844.1 (hypothetical protein Csa_000176 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 7.9e-134
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query: 1   MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR 60
           MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR
Sbjct: 1   MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR 60

Query: 61  NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV 120
           NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV
Sbjct: 61  NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV 120

Query: 121 SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS 180
           SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS
Sbjct: 121 SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS 180

Query: 181 LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 240
           LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI
Sbjct: 181 LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 240

Query: 241 SV 243
           SV
Sbjct: 241 SV 242

BLAST of CsaV3_5G002330 vs. NCBI nr
Match: XP_031741228.1 (uncharacterized protein LOC101212153 [Cucumis sativus])

HSP 1 Score: 487.3 bits (1253), Expect = 7.9e-134
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query: 1   MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR 60
           MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR
Sbjct: 210 MIKLNPTTIKYSTYPFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHR 269

Query: 61  NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV 120
           NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV
Sbjct: 270 NKYIMCCGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASV 329

Query: 121 SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS 180
           SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS
Sbjct: 330 SVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS 389

Query: 181 LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 240
           LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI
Sbjct: 390 LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRI 449

Query: 241 SV 243
           SV
Sbjct: 450 SV 451

BLAST of CsaV3_5G002330 vs. NCBI nr
Match: XP_008437350.1 (PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo] >KAA0042714.1 late embryogenesis abundant protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 401.0 bits (1029), Expect = 7.4e-108
Identity = 202/218 (92.66%), Postives = 214/218 (98.17%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MADKEQVKPLASA+AELRSDDHIFLPPP PKL+L+RNKYI CCGCF+ALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASATAELRSDDHIFLPPP-PKLNLYRNKYIKCCGCFSALLLILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 144
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS +IYYH+K
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNK 120

Query: 145 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 204
           VIGEGETPPGEVKAKDTL+MNVTV+IEPWK+DDASSLIKDWNSG+LSISSYTEIPGRVK+
Sbjct: 121 VIGEGETPPGEVKAKDTLKMNVTVKIEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKL 180

Query: 205 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 243
           LG+IKKNYLVKISCSLTYNSKSKTIQ QDCDQRVRISV
Sbjct: 181 LGAIKKNYLVKISCSLTYNSKSKTIQRQDCDQRVRISV 217

BLAST of CsaV3_5G002330 vs. NCBI nr
Match: XP_038875804.1 (uncharacterized protein LOC120068170 [Benincasa hispida])

HSP 1 Score: 352.4 bits (903), Expect = 3.0e-93
Identity = 184/219 (84.02%), Postives = 200/219 (91.32%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MADKEQVKPLASA+ E RSDD IFLPPP  KLHLH+NKYI  CGCFAALL+ILAVIGIVL
Sbjct: 1   MADKEQVKPLASATVEPRSDDDIFLPPP-AKLHLHKNKYIKFCGCFAALLIILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGII-VVASVSVRNPNVASFKYSKASIEIYYHD 144
           GFTV HI+TP+IKIDSLSF N T SSNS II VVASVSVRNPNVASFKYSKAS EIYYH 
Sbjct: 61  GFTVLHIRTPNIKIDSLSFLNSTSSSNSRIIFVVASVSVRNPNVASFKYSKASTEIYYHG 120

Query: 145 KVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVK 204
            VIGEGETPPGEVKAKDTL+MN+TVEIEP K+DDASSLIKDWN G+L+ISSYTEIPGRVK
Sbjct: 121 TVIGEGETPPGEVKAKDTLKMNMTVEIEPEKIDDASSLIKDWNLGALNISSYTEIPGRVK 180

Query: 205 ILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 243
           ILGSIKK++LVKI+CSLT+NS+S+ IQGQDCDQRVRISV
Sbjct: 181 ILGSIKKHFLVKITCSLTFNSRSEMIQGQDCDQRVRISV 218

BLAST of CsaV3_5G002330 vs. NCBI nr
Match: XP_022958536.1 (uncharacterized protein LOC111459739 [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 8.0e-78
Identity = 156/227 (68.72%), Postives = 183/227 (80.62%), Query Frame = 0

Query: 15  PFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALL 74
           P F     IAMA+K+QVKPLAS +  LRSDD  FLPPP  KL LHRNKYIMC GCFAALL
Sbjct: 204 PSFTIISPIAMAEKDQVKPLASPATHLRSDDDQFLPPP-AKLRLHRNKYIMCSGCFAALL 263

Query: 75  LILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSK 134
           LILAVIGIVLGFTV HIKTPD+KID LSF N T  SN G+I+V SV VRNPNVASFKY K
Sbjct: 264 LILAVIGIVLGFTVLHIKTPDLKIDKLSFSNAT--SNGGVIIVVSVFVRNPNVASFKYLK 323

Query: 135 ASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISS 194
           A+  IYYHDK+IGEGETP GE KAKDT+ MNVT+EI+  +MD+  SL++D  SG L+ISS
Sbjct: 324 ATTVIYYHDKMIGEGETPGGEAKAKDTMTMNVTMEIKAEEMDEGLSLMEDLKSGGLNISS 383

Query: 195 YTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRIS 242
           YTEIPGRVKI+G I+K + VK+ CS TYN+K++TI+ +DCDQ V++S
Sbjct: 384 YTEIPGRVKIIGFIRKRFEVKMECSFTYNAKTQTIEREDCDQHVKMS 427

BLAST of CsaV3_5G002330 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-11
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 0

Query: 73  LLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNS-----GIIVVASVSVRNPNV 132
           +++I+  + ++L      I  P+I+  S+S  +     NS        +V+ +S+RN N 
Sbjct: 46  IIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNF 105

Query: 133 ASFKYSKASIEIYYHDK-VIGEGETPPGEVKAKDTLRM-NVTVEIEPWKMDDASSLIKDW 192
            +F++  +++ + Y D  V+GE +     V+A  T+R+  V VEI  +++ D   L KD 
Sbjct: 106 GAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL 165

Query: 193 NSGSLSISSYTEIPGRVKILGSIKKNYLVKI-SCSLTYNSKSKTIQGQDCD 236
             G L + S  E+ GR+K+LG  +K + V + SC++  N   + IQ   C+
Sbjct: 166 RLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNLLCE 214

BLAST of CsaV3_5G002330 vs. ExPASy TrEMBL
Match: A0A0A0KMH1 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152140 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.0e-118
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 144
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 120

Query: 145 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 204
           VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI
Sbjct: 121 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 180

Query: 205 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 243
           LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV
Sbjct: 181 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 218

BLAST of CsaV3_5G002330 vs. ExPASy TrEMBL
Match: A0A5A7THA2 (Late embryogenesis abundant protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002120 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.6e-108
Identity = 202/218 (92.66%), Postives = 214/218 (98.17%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MADKEQVKPLASA+AELRSDDHIFLPPP PKL+L+RNKYI CCGCF+ALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASATAELRSDDHIFLPPP-PKLNLYRNKYIKCCGCFSALLLILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 144
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS +IYYH+K
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNK 120

Query: 145 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 204
           VIGEGETPPGEVKAKDTL+MNVTV+IEPWK+DDASSLIKDWNSG+LSISSYTEIPGRVK+
Sbjct: 121 VIGEGETPPGEVKAKDTLKMNVTVKIEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKL 180

Query: 205 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 243
           LG+IKKNYLVKISCSLTYNSKSKTIQ QDCDQRVRISV
Sbjct: 181 LGAIKKNYLVKISCSLTYNSKSKTIQRQDCDQRVRISV 217

BLAST of CsaV3_5G002330 vs. ExPASy TrEMBL
Match: A0A1S3ATT7 (uncharacterized protein LOC103482794 OS=Cucumis melo OX=3656 GN=LOC103482794 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.6e-108
Identity = 202/218 (92.66%), Postives = 214/218 (98.17%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MADKEQVKPLASA+AELRSDDHIFLPPP PKL+L+RNKYI CCGCF+ALLLILAVIGIVL
Sbjct: 1   MADKEQVKPLASATAELRSDDHIFLPPP-PKLNLYRNKYIKCCGCFSALLLILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 144
           GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS +IYYH+K
Sbjct: 61  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNK 120

Query: 145 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 204
           VIGEGETPPGEVKAKDTL+MNVTV+IEPWK+DDASSLIKDWNSG+LSISSYTEIPGRVK+
Sbjct: 121 VIGEGETPPGEVKAKDTLKMNVTVKIEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKL 180

Query: 205 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRISV 243
           LG+IKKNYLVKISCSLTYNSKSKTIQ QDCDQRVRISV
Sbjct: 181 LGAIKKNYLVKISCSLTYNSKSKTIQRQDCDQRVRISV 217

BLAST of CsaV3_5G002330 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.9e-78
Identity = 156/227 (68.72%), Postives = 183/227 (80.62%), Query Frame = 0

Query: 15  PFFWCHFTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALL 74
           P F     IAMA+K+QVKPLAS +  LRSDD  FLPPP  KL LHRNKYIMC GCFAALL
Sbjct: 204 PSFTIISPIAMAEKDQVKPLASPATHLRSDDDQFLPPP-AKLRLHRNKYIMCSGCFAALL 263

Query: 75  LILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSK 134
           LILAVIGIVLGFTV HIKTPD+KID LSF N T  SN G+I+V SV VRNPNVASFKY K
Sbjct: 264 LILAVIGIVLGFTVLHIKTPDLKIDKLSFSNAT--SNGGVIIVVSVFVRNPNVASFKYLK 323

Query: 135 ASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISS 194
           A+  IYYHDK+IGEGETP GE KAKDT+ MNVT+EI+  +MD+  SL++D  SG L+ISS
Sbjct: 324 ATTVIYYHDKMIGEGETPGGEAKAKDTMTMNVTMEIKAEEMDEGLSLMEDLKSGGLNISS 383

Query: 195 YTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRIS 242
           YTEIPGRVKI+G I+K + VK+ CS TYN+K++TI+ +DCDQ V++S
Sbjct: 384 YTEIPGRVKIIGFIRKRFEVKMECSFTYNAKTQTIEREDCDQHVKMS 427

BLAST of CsaV3_5G002330 vs. ExPASy TrEMBL
Match: A0A6J1K4Z4 (uncharacterized protein LOC111491239 OS=Cucurbita maxima OX=3661 GN=LOC111491239 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 4.3e-77
Identity = 154/217 (70.97%), Postives = 179/217 (82.49%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           M +K+QVKPLAS +  LRSDD  FLPPP  KL LHRNKYIMC GCFAALLLILAVIGIVL
Sbjct: 1   MPEKDQVKPLASPATHLRSDDDQFLPPP-AKLRLHRNKYIMCSGCFAALLLILAVIGIVL 60

Query: 85  GFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDK 144
           GFTV HIKTPD+KID LSF N T  SN GII+VASV VRNPNVASFKYSKA++ IYYH  
Sbjct: 61  GFTVLHIKTPDLKIDKLSFSNTT--SNGGIIIVASVFVRNPNVASFKYSKATMMIYYHGA 120

Query: 145 VIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKI 204
           +IGEGETP GE KAKDT+ MNVTVEI+  +MD+  SL++D  SG L+ISSY EIPGRVKI
Sbjct: 121 MIGEGETPGGEAKAKDTMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYMEIPGRVKI 180

Query: 205 LGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRVRIS 242
           +G IKK + VK+ CS TYN+K++TI+ +DCD+RV+IS
Sbjct: 181 IGFIKKMFEVKLECSFTYNAKTQTIEKEDCDERVKIS 214

BLAST of CsaV3_5G002330 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-30
Identity = 83/223 (37.22%), Postives = 124/223 (55.61%), Query Frame = 0

Query: 25  MADKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKYIMCCGCFAALLLILAVIGIVL 84
           MAD E V+PLA A+    SD+           H  RN+ I C  C  A  LIL  I + L
Sbjct: 1   MADSEHVRPLAPATILPVSDES---ASNIKNTHRSRNR-IKCSICVTATSLILTTIVLTL 60

Query: 85  GFTVFHIKTPDIK--------IDSLSFPNDTLSSNSGIIVVASVSVRNPNVASFKYSKAS 144
            FTVF +K P IK        +DS++  N      + I ++  VSV+NPN ASFKYS  +
Sbjct: 61  VFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTT 120

Query: 145 IEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASSLIKDWN-SGSLSISSY 204
            +IYY   ++GE    PG+ +   T RMNVTV+I   ++     L ++ + SG +++ SY
Sbjct: 121 TDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLDRILSDPGLGREISRSGLVNVWSY 180

Query: 205 TEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRV 239
           T + G+VKI+G +KK+  VK++C++  N   + IQ  DC +++
Sbjct: 181 TRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDCKKKI 219

BLAST of CsaV3_5G002330 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 70/222 (31.53%), Postives = 112/222 (50.45%), Query Frame = 0

Query: 27  DKEQVKPLASASAELRSDDHIFLPPPDPKLHLHRNKY-------IMCCGCFAALLLILAV 86
           +++Q KPLA      RSD     P  + + H  R KY       I+CCG  A+L +++AV
Sbjct: 9   NEDQAKPLAPLFLTTRSDQ----PDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAV 68

Query: 87  IGIVLGFTVFHIKTPDIKIDSLS------FPNDTLSSNSGIIVVASVSVRNPNVASFKYS 146
             IVL  TVFH+ +P++ +DS+S      F N  +++N    V   +S+ NPN A F   
Sbjct: 69  TFIVLSLTVFHLHSPNLTVDSISFNQRFDFVNGKVNTNQNTTVSVEISLHNPNPALFIVK 128

Query: 147 KASIEIYYHD-KVIGEGETPPGEVKAKDTLRMNVTVEIEPWK-MDDASSLIKDWNSGSLS 206
             ++  Y+ +  V+GE       + AK T++MN+T EI   K +     L++D N   + 
Sbjct: 129 NVNVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKTKLLASLPGLMEDLNGRGVD 188

Query: 207 ISSYTEIPGRVKILGSIKKNYLVKISCSL---TYNSKSKTIQ 231
           + S  E+ GRVK +   +K   ++  C +   T N  + T Q
Sbjct: 189 LKSSVEVRGRVKKMKIFRKTVHLQTDCFMKMTTNNFLTPTFQ 226

BLAST of CsaV3_5G002330 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 89.4 bits (220), Expect = 4.5e-18
Identity = 61/242 (25.21%), Postives = 111/242 (45.87%), Query Frame = 0

Query: 21  FTIAMADKEQVKPLASASAELRSDDHIFLPPPDPKL--------------HLHRNKYIMC 80
           F+I   DK++ +  A+A           LPPP P                 L R +    
Sbjct: 4   FSIKPDDKKEEEKPATA----------MLPPPKPNASSMETQSANTGTAKKLRRKRNCKI 63

Query: 81  CGCFAALL-LILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVV-------A 140
           C CF  LL L++A++ ++L FT+F  K P   IDS++      S N  ++ V        
Sbjct: 64  CICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNV 123

Query: 141 SVSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDA 200
            +S++NPN   F Y  +S  + Y  +VIGE   P   + A+ T+ +N+T+ +   ++   
Sbjct: 124 DLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSE 183

Query: 201 SSLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDCDQRV 241
           + L+ D  +G + ++++ ++ G+V +L   K       SC L+ +   + +  Q C    
Sbjct: 184 TQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYST 235

BLAST of CsaV3_5G002330 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12
Identity = 46/177 (25.99%), Postives = 85/177 (48.02%), Query Frame = 0

Query: 67  CGCFAALLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNSGIIVVASVS-VRNP 126
           C      ++ L +  + +  TVF  + P+I + S+  P+ +++++S     +  S VRNP
Sbjct: 11  CAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFSAVRNP 70

Query: 127 NVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVEIEPWKMDDASS----- 186
           N A+F +    I+++Y+   IG    P GE+++  T RM  T  ++ + +  ASS     
Sbjct: 71  NRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAASSSQISA 130

Query: 187 ---LIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTIQGQDC 235
                 D +  ++ I S  E+ GRV++LG        K +C +  +S   +I    C
Sbjct: 131 AQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSDGSIVAVRC 187

BLAST of CsaV3_5G002330 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 49/171 (28.65%), Postives = 90/171 (52.63%), Query Frame = 0

Query: 73  LLLILAVIGIVLGFTVFHIKTPDIKIDSLSFPNDTLSSNS-----GIIVVASVSVRNPNV 132
           +++I+  + ++L      I  P+I+  S+S  +     NS        +V+ +S+RN N 
Sbjct: 46  IIVIIFALCLILSSIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNF 105

Query: 133 ASFKYSKASIEIYYHDK-VIGEGETPPGEVKAKDTLRM-NVTVEIEPWKMDDASSLIKDW 192
            +F++  +++ + Y D  V+GE +     V+A  T+R+  V VEI  +++ D   L KD 
Sbjct: 106 GAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDL 165

Query: 193 NSGSLSISSYTEIPGRVKILGSIKKNYLVKI-SCSLTYNSKSKTIQGQDCD 236
             G L + S  E+ GR+K+LG  +K + V + SC++  N   + IQ   C+
Sbjct: 166 RLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNLLCE 214

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8647844.17.9e-134100.00hypothetical protein Csa_000176 [Cucumis sativus][more]
XP_031741228.17.9e-134100.00uncharacterized protein LOC101212153 [Cucumis sativus][more]
XP_008437350.17.4e-10892.66PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo] >KAA0042714.1 lat... [more]
XP_038875804.13.0e-9384.02uncharacterized protein LOC120068170 [Benincasa hispida][more]
XP_022958536.18.0e-7868.72uncharacterized protein LOC111459739 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q6DST13.0e-1128.65Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN... [more]
Match NameE-valueIdentityDescription
A0A0A0KMH15.0e-118100.00LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152140 PE=4 ... [more]
A0A5A7THA23.6e-10892.66Late embryogenesis abundant protein-like protein OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3ATT73.6e-10892.66uncharacterized protein LOC103482794 OS=Cucumis melo OX=3656 GN=LOC103482794 PE=... [more]
A0A6J1H2C03.9e-7868.72uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597... [more]
A0A6J1K4Z44.3e-7770.97uncharacterized protein LOC111491239 OS=Cucurbita maxima OX=3661 GN=LOC111491239... [more]
Match NameE-valueIdentityDescription
AT2G46150.11.7e-3037.22Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23610.11.1e-2131.53Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G54200.14.5e-1825.21Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT4G23930.11.6e-1225.99Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64065.12.1e-1228.65Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1820coord: 79..224
e-value: 1.3E-14
score: 56.2
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 55..239
NoneNo IPR availablePANTHERPTHR31852:SF151LATE EMBRYOGENESIS ABUNDANT PROTEINcoord: 55..239
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 75..177
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 120..218
e-value: 4.0E-14
score: 53.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G002330.1CsaV3_5G002330.1mRNA