CsaV3_5G002250 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G002250
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	GDT1 family protein
Location	chr5: 1368619 .. 1375888 (+)
RNA-Seq Expression	CsaV3_5G002250
Synteny	CsaV3_5G002250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTATTTTACAATTATGATTATATATAGTTTTGAAATAAATAAAAGTTAATTAAAATATTTACAAGAATAAATTTTTATTAATGTTTATCAATAGGATAGTATGATATAAATCTATTAATATCTAAGACGGATAGAGTCCAACCACCAAAAATCAATTTCATGATTGTGTTAACTCAAGAGGTCACATGTTAGTAAGGATGTGTAGACTGTTGTTAGATAACAATCGAACTGGTTGCCCCAACGGGCCGAGTGGCGGAGACGGACACACCAACATATAAAATGGTGTGTGGAGCCACTTGGCCCAATGGGAACGGATAGAAAGATAAAGTGTAGTTGAGAGTGTTTGGCGCTCCACACTGAGTGGTGGTTGCTCCTTCTTCTTCTTCTTCTTCATCCTGGACTCGCATTTCTCCAATCCCTTTAAACACTGAAAGATTCAGAGTAACAACAGGGAGGGGATTGAAGAATAATGCCAGCCACAACACTTTCCCACTTTGCGTTTCATTCACCTCCCAACTTTCTTCCCACTTGTTTCATTTCTCCTAACTCTCCTTGCAGGAACTTCTCGCTTCATGATTCTATTCCCCTTCTTTTCAGGTAATCACAATTATGTGGACTCCTCTATTTGTCTGCTTCAGTTTTATTTCACTGTCGTTGATGCTAAACAGGAAAATACGAACATAGATGAATTCGGTCCCTGTTTTGCTATCTGAGCTGAAAACATCATGGAATTTCGGAATTGGGTTCTTCCCTTTTTAGGGTAGCAAAAGTTTTCTTCTTTTTTTTTTGTCGTGGGTGCCTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGATTGGTTTATTTCGAGAATTATCTTGAATACTGAAGTCATGTAAGAGATAAAGCAAATGGAGCTATATATTAATAATATTTCTTTAATGTTTTTGGAAAATTGGGGCAGTGAAGAAAAAGCAAAGGAATTTTGTTTTTAATTTGGGGGAGTGAGAAGGGTATTGTAATCATTACCGTAGGCAATATGATTTTTGTAAAATTGAACAGGAAATGGAAATGGTTGACGAATGGTCGCTGAAAAAGGAAATCTTTATTTAATGCAGTTCATACTTCAGAGAAGGTATAGATTGTGATATCTGTTTTTTGCTTGCTTGATATAGGTTTTCAAGTTGCTGCCGGACAGCAACTACCAAACCGTGGTATTGGCGCAAAACAGAAGTGGTTTCAAAATATTACGATCACCAAGTAACTTTCTCCCATTTCCCTTTTTTTGCAATCTCATTTTCTTTCCAATCCAATTTAACTATTCACTCGACTGGCATTTGTTATGCTGGATTCGAGGTACACCCAGATACTTTTCTGCTTCCTAATAAAATATAAGCTGGATGGTAGTTCTTAGGTTGTTTACATGTAATTTTGGAACACGTAATCGTGCGCGGTTTCGACCAACCCCTTTGGAATCATCTCTTTTTATTGTTTTTGGGGACAACCAATCGGGAACAGAATGCAGAGTATTATATCCCTTTTAGCAACTTACTACACGTTCCCTTTTTAGATGTTATATGCCTTTTTTCTGCCTTTTCTTCTCTCTCTCTCTTTTTTTCTTTTGTTGGACAAAATATGCACATGTAAAACGTATCATTTTCAGGTTCATTTCATGCATACTCGTCCATTGAGATAAATTGTCTTCCAGGAACCTTGTCATCATGACTACAGTAGCCGTGAGGTATCTACAAGATCAATAACTATTCTGGATAATTGTCGTGCACCTGAAAAGCCATTAGCAAAGTACAGCTCAGCGGAGGGCATTCATGAAAATACAGATAACCAAAAATCTAGCAGTATATTCAGCAGTTCATTTTTGAAATTTATGCTCCTGTCTGGGTTCTTCATACTTCAAGACTCTCAGCATGCATTAGCTGGTTCAGATGTTGCTACTGGGTTGCAGTCAGTCCCACTTCTGGGAGACCTTGGTGATATTAGCACAGGTTTTGCTTCAGTTAGTAAATCAGTCCTTGTAACTTTTTTGAATCGGCATTTTTTTCATGTTGAACGAAGCCTAGTTGTAGTTTGATTTCTCTGTGGAGAATTCCTGGTGGACTTGACGTCTCATTTACAATCTTGAAACGCATACGTCTGTAACTGCAAATAACATTCTAATACTCTTGGTCGATTTTAGCTAAACTATAGGGCAATGAATTTAAGCTTGGAGTTTAGTGTAAAGTGAAGAATCATACTTATGTTATCACTTTTTCTTCATGCAGGCGTTTTTGCTAATCTTTTTCTCAGAACTAGGGGACAAGACCTTTTTCATTGCAGTAAGTGCCAAATTAACTTCTGGTGGGAAAAGGAAACTTTGTAGTCTCCTGAACATGAAGTTAATATGAATGGGATTGAATTATTGCTTTCTGACATGTTGTTTGTCTTCATTATGATAGAATATGGTGCTTTTCCTAATTCTATGTTTACTATCTTTTGTAGGCGCTTCTAGCAGCTAGGAACTCTGCTGCTACTGTTTTTACTGGAACTTTTGGTGCACTTGGGTATGTAATTTCATAGTTATTATATACAAAAGGGTTTACTGTTGATATCTTATGAAAACATGGAAAGTTATCTGCAAATCCTTGAAGAGGTGTTTTTCCATGGCAGGGCAATGACCATCATATCTGTTGTTCTCGGACGAACTTTTCACTACGTTGATGAGATTCTTCCATTCAGGTACAATCCTTGTGATAAGAACATCTTTAGGACGAAGAAGTTAAGAGTTTCAGTTCTTAAACTGTATGTTCAATAGTTAATGCACACTTAATCCAAAATGGTTGAGATTTACATTATATGGTCCTAAATGGAATTACGGATTGGGGCACTTTCATTATTTTTATCAATTTAATTGTTTGAGAAAGATTTAAAATTTGATTCTGTTAGTGATACATAACTAAATTTGCCTTCAACCATTAGCTTAAGCTGTTGAGTGAATTGGTAGTTTATTAGATTCCTCTTAAAAGAAATTCCACGTACGATCAACATATTTGATTCTTTAGCACTGTTAATATATGATCACAGGCTTGGTGATAGTGATTTACCAGTTGATGATATTGCAGCTGTCTGTCTCTTGGTGAGTACTGACATTTTGTGATTGGCAAGACAAACCTTGAGACAATAACCAAATGACTTTATGGATGTAATTAAACGCTTTCGACTGACTTCAGGTTTATTTTGGGGTTACAACATTGCTTGATGCCAGCTCAAGTGATGGACTAAAGGCAGAAGATGAGCAGAAGGAGGTAATCTCTTATACTGATGTCTGACATCGGCTGCAGTGTCTTTAAATAACCCTTCTTTTACTTCTTGATCAAGTTCTCAACTGTATGTACTTACTATAACTATGGAGGTCAAATTATATCAGGTAAGTGTTAGGTTTTTATGTAACAATAAACTAGCTAAATGTTAAGATTCTTATGTGAAAATATACAAGAATTTTATGTCTTAAAAGTAATTAAATAGAAAATTTGGCATGAAATTAATAGACTGTCCTTATTGGAATGGCTAAGCCCCATGAGGTTATGAAATACTGAAAAGGTCTAAGATAAATGTAATATGTACTGGCTAGTACAGAAAACAAAATCTAATGCCCTAGTAATGAGACCTTCAATGTGCTGCCAAGCAGATTCGTTTTTATTCCTAATGCATGAAGCAAAGGATTGAAGCTGATGGACTTCGAAATTTTCCTTTTAAAAGTAAATGTTTTCTACATCTGAAAAGGAAAGCAACCTATTCATTTTCAAACTATTTAGAAAAGTAATATTGGGTTTTAATATCATTACATTGGACTACCACTTACCAGTGTTTTTAACTTGTCATGTACATAATACCTTTTCAAATTATTGATGAAAGTACATTTAAAGATGTTTTGTGAAACATGAAAAAAAAACTTTAGGCAAATTATGACTACTATAGTGCAAGGTGGAGAGCATTTCTTCGAAGGCTTTTTGTGTCCATGGACTCTGGTGGTGGAAATTTTCCAAAACTTTTTTTTCTTCGAAAAATTGTTTACTTTGTTTTGTTTTTCTTTTTATTCCAGTGAACTCTCAGATTAAAACAGTTGTTCTTTTTTTTTTTTGGGGGGGGGTGGGTGGGTGGAAGAGGAGGGGGAGGGGGAGGGGGACTGAAATGGTAAATATAGAAAAATAGTCTTAAAACTGCTGTAATCACAAACTCTTTTCCCCTCTAAGAGAACTATATGATGTTACTAAAATCATATGTACTTTTGTGAATGGACTACAGTAGTTGAAACTGAAAGTATGTTAGAAAATAACACTTTTGTTTTGAAATCTGAATCAGGCAGAATTAGCTGTCTCCAAGTTCTCAGGAAATGGTGCCGGAATATTAGCTGCTGCCAGTACTGTCGTCAGCACCTTTGCATTAGTGTTTGTAGCTGAGTGGGGTGACAAGTCATTTTTCTCTACGATTGGTAATCGGAAATTCTTTTGAATTCTACATATTCTTCACTATTTTCTTGTCATCGAAGTGTTGTATTGAAATCCATTACTGATACTAAATCTCGAAATTCGATTGTTTATATGATAGGATGGCCACATCTTGAAAAGATTAAGAGTTAATCATCAAATTTCGAATACATCGGGATTTGGCTGAAAATTATTAGAACTAATGAAGTAGACTTACTAGTTAATAGTGTAAACTGCGTTCAATTTTCCAGTCCTTTATAACTAATAAACAATTAACCATAAACAATTATAAAAAATTGTCTTTGGAATAAGCTTCTGGGAAGATCCAAACCAGCACTGGCTTTCTTTTTCTTCATTCAATATCCTTATGCGGACCAAAATTGTAGCTTTTTAATTAAGTCTTTAGTACTTCCTTCTATATCATAACTCAAAACTATATTTTATTTTTGCATATGTAGCCCTTGCTGCTGCTTCTTCACCCCTTGGAGTCATTGGTGGTGCACTAGCTGGTCATGGTGTTGCAACATTGGTAAACTTCTTTTCTTTTAAGAGCTTCCAGTTCCTACATTTGTGTAAACATTATATTAATCTATTGTGTAAACAACTTAGTGTGAAAGTCGATCTGTAAGATAGATTTTTATAGTTTTGAGTGTGTACAGAATCACGAACGTTCTATAAGTGGTTGTCACACTAACTTGAATCTTGTCTACCTGTCTACAATGGGGTCTTTTTATTAGGGGATCGTTTAATCCACGAATTCATTTGAAACAACACATTAGATACTTCAATTTAGAAAATTTAGAACAATGTTTATGTGGATGAGTGAAATAGAAGAAAATTTTAAATTATGCTTTTCTCATTTGAAACAACACACATATGAATGGACATATATGAAGTGTACCATGTTGAGGATTTCACATTAAAAATATAAATGAACCCACATTTTTGTAAAATTCAAGATTACTCCTTTTGTTGTTAATGAAACCTTCGGTTTATTTGATTTGATATTAGAGTCTAAACAAGCCCAATCAGATGTTGAGTCCAACTTTAGGATTTGATACAAGAATGGTGAACTCAAAAAGACACCAAATTGAGTATTCTACATTAAAGAAACGAAGAGACCTCACATATACATGGGTTACTCATATTGTTGATTAGTTTTGAGATGAAACTCCATGTTTATCTAATATACCAAATCTTTCCCTAACTATTTATCATGCTCATCCGTCAAGTTGCCAGTTTTTTTGGTCTGATTTCAATAATATATCTGCAGCTTGCTGTTCTAGGAGGTTCTTTGCTAGGGACATTTTTATCAGAAAAGGTAAGATGATCGATCATTCATTCTTCATCCACTTTATCCCTTTTATGAATGTTCACTACCATCAACTGCACACTATATGCTCCAGGTGGATGAACTCGATGCTTTTCTTATTTGAACTTAACATGAATTTCCTTCTTTCTAGGTTATTTATCTTTCTCTTTTTATCTTTCTCTTTTCATCTTTTTAAAAAGCAAAACACAACTCACTATTTTAAACTGTTCATTGTTCAATGTGGGTTGAAAGGCCAACCAAGCCAGGATTCTGATATGACAACATTTTTTTTTTGTCTATTTTTTATTTTTTTCATTTGGGGGAGGGGGTCTGTATTGAGATCAGTTATTCCCTGCACAAGAAGGGGAAAAATAAAAAAGGGAAAAAATGAAGAGAAAAAAAGAAAAAAGAAAGAAAGAAAGAATTGATCCTTTATATGATTACTTTTTCAATAAAGTAAACTCAGGGTTTTTGTAGGAGTTAAATATTTCCTTAGCTTTTCAATTATTGACACAAGTTTAGAAGGAAGGGATAATCAGTGAAAAATTATTCGTCAAACTTCTCTTTTGAATGTCCTAAAGCAGAGTCTTATGTCTCCAGAAAAGAGAGGAAAAAATCCAAAGTAATTATTGTTTGAAATCCCATTTGCTTTCTTTAATTCTCCCCCTCCCAATCAAATATATAAAAGAATAGAATATTAATGTAGTACTTATCCTTTGTTATTTTTTTCTTCTGGAATCTGGATATGTCCTATTTTTATTGTGACTGTATTCTTTCTTCCCCCCTCCAGAATTCCAAAGCATCATGCAAATGAAAATTCCCATCCTAGTAGCCGTATTAATCTCTGTTTATATTCAGGGCATAATCTTTTCAAATTTTCCGTATGCTGTCAGTCGTCAATGTGTGTTCTTTACCCCATTCAAGAATTATGGTAAACCAGAAGGGATTATCTTGAACTGCTCTACATGCACATAAAGAACCCAATAAATCTCATCTTTTTCATCCTCGCAAAGTTACAATATGAAACCGAGTGTCAGTTAGCTAATAGCTGTGCAATTTAGCAGCATCATTACATAGTATGTGCTTTAGAAAGGTTCCATGTATTAGTATTTGAACGCAACAATTTTCTGGAACAAGAAAGTTTTATGCTTTTGGGTCTTCCTGATTTGCAACTATTAATAAGTCTAGGCCCACCTACTAGGCTGCTTCTTATTCTTGTGCTCCTAACTCAAGTTGCCTGTTTTTATCTCAAAAGTGGAGAGCATATTCTTATTCCTGGAAATTACGTAAACAAAGGAAGTCCTTATTCTAACATATACTATTTTATTTGCAGATTATCGCTTACGTTGGAGGAGTTCTTTTTCTCGTATTCGCTGCTGTAACTTTAGTAGAGATAGTAAACTAGGAACTATAGTATTTCAAACTCTCTTATTGACATGATTTGTGAATTAACTTTCTTTTCTTCTTCTTTTCTTCTTTTTTTTTTTTTTGTTTTTT

mRNA sequence

ATGCCAGCCACAACACTTTCCCACTTTGCGTTTCATTCACCTCCCAACTTTCTTCCCACTTGTTTCATTTCTCCTAACTCTCCTTGCAGGAACTTCTCGCTTCATGATTCTATTCCCCTTCTTTTCAGGTTTTCAAGTTGCTGCCGGACAGCAACTACCAAACCGTGGTATTGGCGCAAAACAGAAGTGGTTTCAAAATATTACGATCACCAAGAACCTTGTCATCATGACTACAGTAGCCGTGAGGTATCTACAAGATCAATAACTATTCTGGATAATTGTCGTGCACCTGAAAAGCCATTAGCAAAGTACAGCTCAGCGGAGGGCATTCATGAAAATACAGATAACCAAAAATCTAGCAGTATATTCAGCAGTTCATTTTTGAAATTTATGCTCCTGTCTGGGTTCTTCATACTTCAAGACTCTCAGCATGCATTAGCTGGTTCAGATGTTGCTACTGGGTTGCAGTCAGTCCCACTTCTGGGAGACCTTGGTGATATTAGCACAGGTTTTGCTTCAGCGTTTTTGCTAATCTTTTTCTCAGAACTAGGGGACAAGACCTTTTTCATTGCAGCGCTTCTAGCAGCTAGGAACTCTGCTGCTACTGTTTTTACTGGAACTTTTGGTGCACTTGGGGCAATGACCATCATATCTGTTGTTCTCGGACGAACTTTTCACTACGTTGATGAGATTCTTCCATTCAGGCTTGGTGATAGTGATTTACCAGTTGATGATATTGCAGCTGTCTGTCTCTTGGTTTATTTTGGGGTTACAACATTGCTTGATGCCAGCTCAAGTGATGGACTAAAGGCAGAAGATGAGCAGAAGGAGGCAGAATTAGCTGTCTCCAAGTTCTCAGGAAATGGTGCCGGAATATTAGCTGCTGCCAGTACTGTCGTCAGCACCTTTGCATTAGTGTTTGTAGCTGAGTGGGGTGACAAGTCATTTTTCTCTACGATTGCCCTTGCTGCTGCTTCTTCACCCCTTGGAGTCATTGGTGGTGCACTAGCTGGTCATGGTGTTGCAACATTGCTTGCTGTTCTAGGAGGTTCTTTGCTAGGGACATTTTTATCAGAAAAGATTATCGCTTACGTTGGAGGAGTTCTTTTTCTCGTATTCGCTGCTGTAACTTTAGTAGAGATAGTAAACTAG

Coding sequence (CDS)

ATGCCAGCCACAACACTTTCCCACTTTGCGTTTCATTCACCTCCCAACTTTCTTCCCACTTGTTTCATTTCTCCTAACTCTCCTTGCAGGAACTTCTCGCTTCATGATTCTATTCCCCTTCTTTTCAGGTTTTCAAGTTGCTGCCGGACAGCAACTACCAAACCGTGGTATTGGCGCAAAACAGAAGTGGTTTCAAAATATTACGATCACCAAGAACCTTGTCATCATGACTACAGTAGCCGTGAGGTATCTACAAGATCAATAACTATTCTGGATAATTGTCGTGCACCTGAAAAGCCATTAGCAAAGTACAGCTCAGCGGAGGGCATTCATGAAAATACAGATAACCAAAAATCTAGCAGTATATTCAGCAGTTCATTTTTGAAATTTATGCTCCTGTCTGGGTTCTTCATACTTCAAGACTCTCAGCATGCATTAGCTGGTTCAGATGTTGCTACTGGGTTGCAGTCAGTCCCACTTCTGGGAGACCTTGGTGATATTAGCACAGGTTTTGCTTCAGCGTTTTTGCTAATCTTTTTCTCAGAACTAGGGGACAAGACCTTTTTCATTGCAGCGCTTCTAGCAGCTAGGAACTCTGCTGCTACTGTTTTTACTGGAACTTTTGGTGCACTTGGGGCAATGACCATCATATCTGTTGTTCTCGGACGAACTTTTCACTACGTTGATGAGATTCTTCCATTCAGGCTTGGTGATAGTGATTTACCAGTTGATGATATTGCAGCTGTCTGTCTCTTGGTTTATTTTGGGGTTACAACATTGCTTGATGCCAGCTCAAGTGATGGACTAAAGGCAGAAGATGAGCAGAAGGAGGCAGAATTAGCTGTCTCCAAGTTCTCAGGAAATGGTGCCGGAATATTAGCTGCTGCCAGTACTGTCGTCAGCACCTTTGCATTAGTGTTTGTAGCTGAGTGGGGTGACAAGTCATTTTTCTCTACGATTGCCCTTGCTGCTGCTTCTTCACCCCTTGGAGTCATTGGTGGTGCACTAGCTGGTCATGGTGTTGCAACATTGCTTGCTGTTCTAGGAGGTTCTTTGCTAGGGACATTTTTATCAGAAAAGATTATCGCTTACGTTGGAGGAGTTCTTTTTCTCGTATTCGCTGCTGTAACTTTAGTAGAGATAGTAAACTAG

Protein sequence

MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN*

Homology

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BLAST of CsaV3_5G002250 vs. NCBI nr
Match: XP_004143960.2 (GDT1-like protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN50042.1 hypothetical protein Csa_000284 [Cucumis sativus])

HSP 1 Score: 731.5 bits (1887), Expect = 3.8e-207
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK 60
           MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK
Sbjct: 1   MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK 60

Query: 61  TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS 120
           TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS
Sbjct: 61  TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS 120

Query: 121 SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF 180
           SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF
Sbjct: 121 SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF 180

Query: 181 SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD 240
           SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD
Sbjct: 181 SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD 240

Query: 241 LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV 300
           LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV
Sbjct: 241 LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV 300

Query: 301 STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK 360
           STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK
Sbjct: 301 STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK 360

Query: 361 IIAYVGGVLFLVFAAVTLVEIVN 384
           IIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 IIAYVGGVLFLVFAAVTLVEIVN 383

[Close]

BLAST of CsaV3_5G002250 vs. NCBI nr
Match: XP_008437357.1 (PREDICTED: GDT1-like protein 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 692.2 bits (1785), Expect = 2.5e-195
Identity = 368/389 (94.60%), Postives = 375/389 (96.40%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKP 60
           MPATTLSHFAFHSP     P F+PTC +SPNSPCRNFSLHDS PLLFRFSSCCRTATTK 
Sbjct: 1   MPATTLSHFAFHSPLLSSSPKFIPTCLVSPNSPCRNFSLHDSAPLLFRFSSCCRTATTKQ 60

Query: 61  WYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTD 120
           W+WRKTEVVSKYYDHQE CHHDYSSRE+ST+SITILDNCRAPEKPLAKYSSAEGI+ENTD
Sbjct: 61  WFWRKTEVVSKYYDHQELCHHDYSSRELSTKSITILDNCRAPEKPLAKYSSAEGINENTD 120

Query: 121 NQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGS-DVATGLQSVPLLGDLGDISTGFASA 180
           NQKSSS+FSSSFLK MLLSGFFILQDSQHALAGS DVATGLQSVPLLGDLGDISTGFASA
Sbjct: 121 NQKSSSLFSSSFLKLMLLSGFFILQDSQHALAGSDDVATGLQSVPLLGDLGDISTGFASA 180

Query: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPF 240
           FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGAL AMTIISV LGRTFHYVDEILPF
Sbjct: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAAMTIISVFLGRTFHYVDEILPF 240

Query: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300
           RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA
Sbjct: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300

Query: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360
           AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG
Sbjct: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360

Query: 361 TFLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           TFLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 TFLSEKIIAYVGGVLFLVFAAVTLVEIVN 389

[Close]

BLAST of CsaV3_5G002250 vs. NCBI nr
Match: KAA0042703.1 (GDT1-like protein 1 [Cucumis melo var. makuwa] >TYK06107.1 GDT1-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 655.6 bits (1690), Expect = 2.6e-184
Identity = 345/367 (94.01%), Postives = 353/367 (96.19%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKP 60
           MPATTLSHFAFHSP     P F+PTC +SPNSPCRNFSLHDS PLLFRFSSCCRTATTK 
Sbjct: 1   MPATTLSHFAFHSPLLSSSPKFIPTCLVSPNSPCRNFSLHDSAPLLFRFSSCCRTATTKQ 60

Query: 61  WYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTD 120
           W+WRKTEVVSKYYDHQE CHHDYSSRE+ST+SITILDNCRAPEKPLAKYSSAEGI+ENTD
Sbjct: 61  WFWRKTEVVSKYYDHQELCHHDYSSRELSTKSITILDNCRAPEKPLAKYSSAEGINENTD 120

Query: 121 NQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGS-DVATGLQSVPLLGDLGDISTGFASA 180
           NQKSSS+FSSSFLK MLLSGFFILQDSQHALAGS DVATGLQSVPLLGDLGDISTGFASA
Sbjct: 121 NQKSSSLFSSSFLKLMLLSGFFILQDSQHALAGSDDVATGLQSVPLLGDLGDISTGFASA 180

Query: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPF 240
           FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGAL AMTIISV LGRTFHYVDEILPF
Sbjct: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAAMTIISVFLGRTFHYVDEILPF 240

Query: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300
           RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA
Sbjct: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300

Query: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360
           AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG
Sbjct: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360

Query: 361 TFLSEKI 362
           TFLSEK+
Sbjct: 361 TFLSEKV 367

[Close]

BLAST of CsaV3_5G002250 vs. NCBI nr
Match: XP_038875218.1 (GDT1-like protein 1, chloroplastic [Benincasa hispida] >XP_038875220.1 GDT1-like protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 646.0 bits (1665), Expect = 2.1e-181
Identity = 345/388 (88.92%), Postives = 359/388 (92.53%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKP 60
           MPATTLSHF FH P     P  + TC +S NSPCRN S HDS+P+L RFSSC R  T K 
Sbjct: 1   MPATTLSHFTFHPPPLSSSPKSVATCLVSLNSPCRNLSFHDSVPVLSRFSSCWRATTRKN 60

Query: 61  WYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTD 120
           WYWR++EVVSKYYD QE CHHDYSSRE+ST+SIT+LDNC APE+ LAKYSSAEGIHENTD
Sbjct: 61  WYWRRSEVVSKYYDRQELCHHDYSSRELSTKSITVLDNCCAPERSLAKYSSAEGIHENTD 120

Query: 121 NQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAF 180
           +Q SS+I SSSFLKFMLLSGFFILQDSQ ALAGSDVATGLQSVP LGDLGDISTGFASAF
Sbjct: 121 SQNSSTIVSSSFLKFMLLSGFFILQDSQQALAGSDVATGLQSVPPLGDLGDISTGFASAF 180

Query: 181 LLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFR 240
           LLIFFSELGDKTFFIAALLAARNSAATVFTGTFGAL AMTIISVVLGRTFHYVDEILPFR
Sbjct: 181 LLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAAMTIISVVLGRTFHYVDEILPFR 240

Query: 241 LGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAA 300
           LGDSDLPVDDIAAVCLLVYFGVTTL+DASSSDGLKAEDEQKEAELAVSKFSGNGAGILAA
Sbjct: 241 LGDSDLPVDDIAAVCLLVYFGVTTLVDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAA 300

Query: 301 ASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGT 360
           ASTVVSTFALVFVAEWGDKSFFSTIALAAA+SPLGVIGGALAGHGVATLLAVLGGSLLGT
Sbjct: 301 ASTVVSTFALVFVAEWGDKSFFSTIALAAAASPLGVIGGALAGHGVATLLAVLGGSLLGT 360

Query: 361 FLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           FLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 FLSEKIIAYVGGVLFLVFAAVTLVEIVN 388

[Close]

BLAST of CsaV3_5G002250 vs. NCBI nr
Match: XP_022146057.1 (GDT1-like protein 1, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 582.0 bits (1499), Expect = 3.7e-162
Identity = 320/392 (81.63%), Postives = 339/392 (86.48%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFS----LHDSIPLLFRFSSCCRTA 60
           MPA  LSHF F  P     P  + TC +S NSPCRN S    L  S P+LF FSS C  +
Sbjct: 1   MPAINLSHFTFPPPSLSSSPKSIATCLLSLNSPCRNLSSSLQLRSSSPVLFSFSSRCSAS 60

Query: 61  TTKPWYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIH 120
           T +  +W K EVVSKY+D QE CH +YSS ++S +S T++DNC +  K LAKY+SA  IH
Sbjct: 61  TRRERHWHKPEVVSKYHDRQELCHRNYSSCDLSAKSATVIDNCSSSGKSLAKYNSAREIH 120

Query: 121 ENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGF 180
           ENTDN  SSS  SSSFLKF+LLSGFFI QDSQ ALAGSD+ATGLQSVPLLGDLGDISTGF
Sbjct: 121 ENTDNLMSSSTISSSFLKFVLLSGFFIFQDSQQALAGSDIATGLQSVPLLGDLGDISTGF 180

Query: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEI 240
           ASAFLLIFFSELGDKTFFIAALLAARNSAA VFTGTFGAL AMTIISVVLGRTFHYVDEI
Sbjct: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAAIVFTGTFGALAAMTIISVVLGRTFHYVDEI 240

Query: 241 LPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAG 300
           LPFRLGDSDLPVDDIAAVCLLVYFGV+TLLDASSSDGLKAEDEQKEAE+AVSKFSGNGAG
Sbjct: 241 LPFRLGDSDLPVDDIAAVCLLVYFGVSTLLDASSSDGLKAEDEQKEAEIAVSKFSGNGAG 300

Query: 301 ILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360
           ILAAASTVVSTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS
Sbjct: 301 ILAAASTVVSTFVLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360

Query: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 392

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot
Match: Q94AX5 (Protein PAM71, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71 PE=1 SV=2)

HSP 1 Score: 363.6 bits (932), Expect = 2.7e-99
Identity = 205/256 (80.08%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 128 LKFMLLSGFFILQDSQHALAGSDVATGLQS-VPLLGDLGDISTGFASAFLLIFFSELGDK 187
           L F+ +SG   L  +  A A S +    QS V   GDLGDIS+GFASAFLLIFFSELGDK
Sbjct: 115 LMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFFSELGDK 174

Query: 188 TFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSDLPVDDI 247
           TFFIAALLAARNSAATVF GTFGALG MTIISVVLGRTFHYVDE+LPFR G +DLP+DDI
Sbjct: 175 TFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDI 234

Query: 248 AAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVVSTFALV 307
           AAVCLLVYFGV+TLLDA S +G KA++EQKEAELAVS+ SGNGAGI+AAA+T++STFALV
Sbjct: 235 AAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTIISTFALV 294

Query: 308 FVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKIIAYVG 367
           FVAEWGDKSFFSTIALAAASSPLGVI GALAGHG ATLLAVLGGSLLG FLSEK IAYVG
Sbjct: 295 FVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVG 354

Query: 368 GVLFLVFAAVTLVEIV 383
           GVLFLVFAAVT+ EIV
Sbjct: 355 GVLFLVFAAVTVAEIV 369

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot
Match: B8AAM2 (GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_00941 PE=3 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.9e-95
Identity = 195/260 (75.00%), Postives = 217/260 (83.46%), Query Frame = 0


Query: 124 SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFFSEL 183
           SS  L     +G  +LQ SQ ALAG++   G+Q V  +GDLGDISTGFASAFLLIFFSEL
Sbjct: 84  SSCGLALAAAAGVLMLQGSQQALAGTEF-MGMQDV--VGDLGDISTGFASAFLLIFFSEL 143

Query: 184 GDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSDLPV 243
           GD+TFFIAALLAARNS A +F GTFGAL  MTIISVVLGR FHYVD I+PF  G +D PV
Sbjct: 144 GDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPV 203

Query: 244 DDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVVSTF 303
           DD  A CLLVY+GVTTLLDA+S D  K  +EQ+EAELAVSKF GNGAGI++AAST+ STF
Sbjct: 204 DDFLAACLLVYYGVTTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTF 263

Query: 304 ALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKIIA 363
            LVF+AEWGDKSFFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEKI+A
Sbjct: 264 VLVFIAEWGDKSFFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKIVA 323

Query: 364 YVGGVLFLVFAAVTLVEIVN 384
           Y+GG LFL FAAVTLVEIVN
Sbjct: 324 YIGGSLFLAFAAVTLVEIVN 340

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot
Match: Q5NAY7 (GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0221700 PE=3 SV=2)

HSP 1 Score: 348.6 bits (893), Expect = 9.1e-95
Identity = 194/260 (74.62%), Postives = 217/260 (83.46%), Query Frame = 0


Query: 124 SSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFFSEL 183
           SS  L     +G  +LQ SQ ALAG++   G+Q V  +GDLGDISTGFASAFLLIFFSEL
Sbjct: 84  SSCGLALAAAAGVLMLQGSQQALAGTEF-MGMQDV--VGDLGDISTGFASAFLLIFFSEL 143

Query: 184 GDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSDLPV 243
           GD+TFFIAALLAARNS A +F GTFGAL  MTIISVVLGR FHYVD I+PF  G +D PV
Sbjct: 144 GDRTFFIAALLAARNSGAIIFLGTFGALAVMTIISVVLGRAFHYVDGIIPFSFGGTDFPV 203

Query: 244 DDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVVSTF 303
           DD  A CLLVY+G+TTLLDA+S D  K  +EQ+EAELAVSKF GNGAGI++AAST+ STF
Sbjct: 204 DDFLAACLLVYYGITTLLDAASGDEEKMNEEQEEAELAVSKFLGNGAGIISAASTIASTF 263

Query: 304 ALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKIIA 363
            LVF+AEWGDKSFFSTIALAAASSPLGVI G+LAGH VATL+AVLGGSLLGTFLSEKI+A
Sbjct: 264 VLVFIAEWGDKSFFSTIALAAASSPLGVIAGSLAGHAVATLIAVLGGSLLGTFLSEKIVA 323

Query: 364 YVGGVLFLVFAAVTLVEIVN 384
           Y+GG LFL FAAVTLVEIVN
Sbjct: 324 YIGGSLFLAFAAVTLVEIVN 340

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot
Match: Q9T0H9 (Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71-HL PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-37
Identity = 99/217 (45.62%), Postives = 143/217 (65.90%), Query Frame = 0


Query: 169 TGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYV 228
           +GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL  MTI+SVV+G+ F  V
Sbjct: 144 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV 203

Query: 229 DEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGN 288
               P +   + LP+ + AA+ LL++FG+ ++ DA     ++A++ + E  + + ++S  
Sbjct: 204 ----PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGE-ETGIELGEYSEA 263

Query: 289 GAGILAAASTVVS--------TFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHG 348
              +   AS  ++        +F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH 
Sbjct: 264 EELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 323

Query: 349 VATLLAVLGGSLLGTFLSEKIIAYVGGVLFLVFAAVT 378
           VAT+LA++GG+ L  ++SEK++ YVGG LFLVFAA T
Sbjct: 324 VATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAAT 354

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot
Match: Q2R2Z4 (GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0544500 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-36
Identity = 99/215 (46.05%), Postives = 134/215 (62.33%), Query Frame = 0


Query: 169 TGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYV 228
           +GF +AF LIF SE+GDKTFFIAALLA +   A V  G+  AL  MTI+SV++GR F  V
Sbjct: 133 SGFTAAFTLIFVSEIGDKTFFIAALLAMQYQRALVLLGSMAALSLMTIVSVIIGRIFQSV 192

Query: 229 DEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDA-----SSSDGLKAEDEQKEAELAVS 288
               P +   + LP+ + AA+ LL +FG  ++ DA     +++  L+   E  E   A  
Sbjct: 193 ----PAQF-QTTLPIGEYAAIALLAFFGFKSIKDAWQLPDNANGNLQGNSESGELAEAEE 252

Query: 289 KFSGNGAGILAAASTVV-STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVA 348
                 A  L +   V+  +F+LVF AEWGD+S  +TIAL AA SP GV  GA+AGH VA
Sbjct: 253 LVKEKVAKKLTSPLEVLWKSFSLVFFAEWGDRSMLATIALGAAQSPFGVASGAIAGHLVA 312

Query: 349 TLLAVLGGSLLGTFLSEKIIAYVGGVLFLVFAAVT 378
           T LA++GG+ L  +LSEK++  +GGVLFL+FA  T
Sbjct: 313 TFLAIVGGAFLANYLSEKLVGLIGGVLFLLFAVAT 342

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL
Match: A0A0A0KNT2 (GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_5G151580 PE=3 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 1.8e-207
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK 60
           MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK
Sbjct: 1   MPATTLSHFAFHSPPNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKPWYWRK 60

Query: 61  TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS 120
           TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS
Sbjct: 61  TEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTDNQKSS 120

Query: 121 SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF 180
           SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF
Sbjct: 121 SIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGFASAFLLIFF 180

Query: 181 SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD 240
           SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD
Sbjct: 181 SELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSD 240

Query: 241 LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV 300
           LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV
Sbjct: 241 LPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVV 300

Query: 301 STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK 360
           STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK
Sbjct: 301 STFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEK 360

Query: 361 IIAYVGGVLFLVFAAVTLVEIVN 384
           IIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 IIAYVGGVLFLVFAAVTLVEIVN 383

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL
Match: A0A1S3AUE3 (GDT1 family protein OS=Cucumis melo OX=3656 GN=LOC103482799 PE=3 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.2e-195
Identity = 368/389 (94.60%), Postives = 375/389 (96.40%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKP 60
           MPATTLSHFAFHSP     P F+PTC +SPNSPCRNFSLHDS PLLFRFSSCCRTATTK 
Sbjct: 1   MPATTLSHFAFHSPLLSSSPKFIPTCLVSPNSPCRNFSLHDSAPLLFRFSSCCRTATTKQ 60

Query: 61  WYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTD 120
           W+WRKTEVVSKYYDHQE CHHDYSSRE+ST+SITILDNCRAPEKPLAKYSSAEGI+ENTD
Sbjct: 61  WFWRKTEVVSKYYDHQELCHHDYSSRELSTKSITILDNCRAPEKPLAKYSSAEGINENTD 120

Query: 121 NQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGS-DVATGLQSVPLLGDLGDISTGFASA 180
           NQKSSS+FSSSFLK MLLSGFFILQDSQHALAGS DVATGLQSVPLLGDLGDISTGFASA
Sbjct: 121 NQKSSSLFSSSFLKLMLLSGFFILQDSQHALAGSDDVATGLQSVPLLGDLGDISTGFASA 180

Query: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPF 240
           FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGAL AMTIISV LGRTFHYVDEILPF
Sbjct: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAAMTIISVFLGRTFHYVDEILPF 240

Query: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300
           RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA
Sbjct: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300

Query: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360
           AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG
Sbjct: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360

Query: 361 TFLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           TFLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 TFLSEKIIAYVGGVLFLVFAAVTLVEIVN 389

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL
Match: A0A5A7THF5 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002080 PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.3e-184
Identity = 345/367 (94.01%), Postives = 353/367 (96.19%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFSLHDSIPLLFRFSSCCRTATTKP 60
           MPATTLSHFAFHSP     P F+PTC +SPNSPCRNFSLHDS PLLFRFSSCCRTATTK 
Sbjct: 1   MPATTLSHFAFHSPLLSSSPKFIPTCLVSPNSPCRNFSLHDSAPLLFRFSSCCRTATTKQ 60

Query: 61  WYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIHENTD 120
           W+WRKTEVVSKYYDHQE CHHDYSSRE+ST+SITILDNCRAPEKPLAKYSSAEGI+ENTD
Sbjct: 61  WFWRKTEVVSKYYDHQELCHHDYSSRELSTKSITILDNCRAPEKPLAKYSSAEGINENTD 120

Query: 121 NQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGS-DVATGLQSVPLLGDLGDISTGFASA 180
           NQKSSS+FSSSFLK MLLSGFFILQDSQHALAGS DVATGLQSVPLLGDLGDISTGFASA
Sbjct: 121 NQKSSSLFSSSFLKLMLLSGFFILQDSQHALAGSDDVATGLQSVPLLGDLGDISTGFASA 180

Query: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPF 240
           FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGAL AMTIISV LGRTFHYVDEILPF
Sbjct: 181 FLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAAMTIISVFLGRTFHYVDEILPF 240

Query: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300
           RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA
Sbjct: 241 RLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILA 300

Query: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360
           AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG
Sbjct: 301 AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLG 360

Query: 361 TFLSEKI 362
           TFLSEK+
Sbjct: 361 TFLSEKV 367

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL
Match: A0A6J1CYI6 (GDT1 family protein OS=Momordica charantia OX=3673 GN=LOC111015356 PE=3 SV=1)

HSP 1 Score: 582.0 bits (1499), Expect = 1.8e-162
Identity = 320/392 (81.63%), Postives = 339/392 (86.48%), Query Frame = 0


Query: 1   MPATTLSHFAFHSP-----PNFLPTCFISPNSPCRNFS----LHDSIPLLFRFSSCCRTA 60
           MPA  LSHF F  P     P  + TC +S NSPCRN S    L  S P+LF FSS C  +
Sbjct: 1   MPAINLSHFTFPPPSLSSSPKSIATCLLSLNSPCRNLSSSLQLRSSSPVLFSFSSRCSAS 60

Query: 61  TTKPWYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIH 120
           T +  +W K EVVSKY+D QE CH +YSS ++S +S T++DNC +  K LAKY+SA  IH
Sbjct: 61  TRRERHWHKPEVVSKYHDRQELCHRNYSSCDLSAKSATVIDNCSSSGKSLAKYNSAREIH 120

Query: 121 ENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGF 180
           ENTDN  SSS  SSSFLKF+LLSGFFI QDSQ ALAGSD+ATGLQSVPLLGDLGDISTGF
Sbjct: 121 ENTDNLMSSSTISSSFLKFVLLSGFFIFQDSQQALAGSDIATGLQSVPLLGDLGDISTGF 180

Query: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEI 240
           ASAFLLIFFSELGDKTFFIAALLAARNSAA VFTGTFGAL AMTIISVVLGRTFHYVDEI
Sbjct: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAAIVFTGTFGALAAMTIISVVLGRTFHYVDEI 240

Query: 241 LPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAG 300
           LPFRLGDSDLPVDDIAAVCLLVYFGV+TLLDASSSDGLKAEDEQKEAE+AVSKFSGNGAG
Sbjct: 241 LPFRLGDSDLPVDDIAAVCLLVYFGVSTLLDASSSDGLKAEDEQKEAEIAVSKFSGNGAG 300

Query: 301 ILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360
           ILAAASTVVSTF LVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS
Sbjct: 301 ILAAASTVVSTFVLVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360

Query: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 392

[Close]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL
Match: A0A6J1EQ13 (GDT1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111435585 PE=3 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.9e-159
Identity = 321/392 (81.89%), Postives = 338/392 (86.22%), Query Frame = 0


Query: 1   MPATTLSHFAFHSPP-----NFLPTCFISPNSPCR----NFSLHDSIPLLFRFSSCCRTA 60
           MPA TLS F F  P        +PTC +S +SPCR      SLH+S+P+LFRFSS C+  
Sbjct: 1   MPAITLSQFTFRPPSPSSSLKSVPTCLVSLSSPCRKLSSKLSLHESVPVLFRFSSGCQAT 60

Query: 61  TTKPWYWRKTEVVSKYYDHQEPCHHDYSSREVSTRSITILDNCRAPEKPLAKYSSAEGIH 120
           T K  YWRK+EVVSKYYD QE    D+ S E+STRS+T++DN  A EK LAK     GIH
Sbjct: 61  TRKERYWRKSEVVSKYYDRQELRRRDFCSCELSTRSVTVMDNPWAFEKSLAK-----GIH 120

Query: 121 ENTDNQKSSSIFSSSFLKFMLLSGFFILQDSQHALAGSDVATGLQSVPLLGDLGDISTGF 180
           +N DN +SSS  SSS LKFMLLSGFFILQ+SQ ALAGSDVATGLQSVPLLGDLGDISTGF
Sbjct: 121 KNIDNHESSSAVSSSVLKFMLLSGFFILQNSQQALAGSDVATGLQSVPLLGDLGDISTGF 180

Query: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEI 240
           ASAFLLIFFSELGDKTFFIAALLAARNSAA VF GTFGAL  MTIISVVLGRTFHYVDE+
Sbjct: 181 ASAFLLIFFSELGDKTFFIAALLAARNSAAIVFAGTFGALAVMTIISVVLGRTFHYVDEV 240

Query: 241 LPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAG 300
           LPFRLG SDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAG
Sbjct: 241 LPFRLGGSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAG 300

Query: 301 ILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360
           ILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS
Sbjct: 301 ILAAASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGS 360

Query: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 384
           LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN
Sbjct: 361 LLGTFLSEKIIAYVGGVLFLVFAAVTLVEIVN 387

[Close]

BLAST of CsaV3_5G002250 vs. TAIR 10
Match: AT1G64150.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 363.6 bits (932), Expect = 1.9e-100
Identity = 205/256 (80.08%), Postives = 223/256 (87.11%), Query Frame = 0


Query: 128 LKFMLLSGFFILQDSQHALAGSDVATGLQS-VPLLGDLGDISTGFASAFLLIFFSELGDK 187
           L F+ +SG   L  +  A A S +    QS V   GDLGDIS+GFASAFLLIFFSELGDK
Sbjct: 115 LMFLAVSGSVALLGTDPAFAASSIPNVTQSLVTSFGDLGDISSGFASAFLLIFFSELGDK 174

Query: 188 TFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEILPFRLGDSDLPVDDI 247
           TFFIAALLAARNSAATVF GTFGALG MTIISVVLGRTFHYVDE+LPFR G +DLP+DDI
Sbjct: 175 TFFIAALLAARNSAATVFVGTFGALGIMTIISVVLGRTFHYVDEVLPFRFGGTDLPIDDI 234

Query: 248 AAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGILAAASTVVSTFALV 307
           AAVCLLVYFGV+TLLDA S +G KA++EQKEAELAVS+ SGNGAGI+AAA+T++STFALV
Sbjct: 235 AAVCLLVYFGVSTLLDAVSDEG-KADEEQKEAELAVSELSGNGAGIVAAANTIISTFALV 294

Query: 308 FVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLAVLGGSLLGTFLSEKIIAYVG 367
           FVAEWGDKSFFSTIALAAASSPLGVI GALAGHG ATLLAVLGGSLLG FLSEK IAYVG
Sbjct: 295 FVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVG 354

Query: 368 GVLFLVFAAVTLVEIV 383
           GVLFLVFAAVT+ EIV
Sbjct: 355 GVLFLVFAAVTVAEIV 369

[Close]

BLAST of CsaV3_5G002250 vs. TAIR 10
Match: AT4G13590.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 159.1 bits (401), Expect = 7.2e-39
Identity = 99/217 (45.62%), Postives = 143/217 (65.90%), Query Frame = 0


Query: 169 TGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYV 228
           +GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL  MTI+SVV+G+ F  V
Sbjct: 144 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV 203

Query: 229 DEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGN 288
               P +   + LP+ + AA+ LL++FG+ ++ DA     ++A++ + E  + + ++S  
Sbjct: 204 ----PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGE-ETGIELGEYSEA 263

Query: 289 GAGILAAASTVVS--------TFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHG 348
              +   AS  ++        +F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH 
Sbjct: 264 EELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 323

Query: 349 VATLLAVLGGSLLGTFLSEKIIAYVGGVLFLVFAAVT 378
           VAT+LA++GG+ L  ++SEK++ YVGG LFLVFAA T
Sbjct: 324 VATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAAT 354

[Close]

BLAST of CsaV3_5G002250 vs. TAIR 10
Match: AT4G13590.2 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 159.1 bits (401), Expect = 7.2e-39
Identity = 99/217 (45.62%), Postives = 143/217 (65.90%), Query Frame = 0


Query: 169 TGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYV 228
           +GF +AF LIF SE+GDKTFFIAALLA +     V  G+ GAL  MTI+SVV+G+ F  V
Sbjct: 144 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV 203

Query: 229 DEILPFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGN 288
               P +   + LP+ + AA+ LL++FG+ ++ DA     ++A++ + E  + + ++S  
Sbjct: 204 ----PAQF-QTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGE-ETGIELGEYSEA 263

Query: 289 GAGILAAASTVVS--------TFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHG 348
              +   AS  ++        +F+LVF AEWGD+S  +T+AL AA SPLGV  GA+AGH 
Sbjct: 264 EELVKEKASKKLTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHL 323

Query: 349 VATLLAVLGGSLLGTFLSEKIIAYVGGVLFLVFAAVT 378
           VAT+LA++GG+ L  ++SEK++ YVGG LFLVFAA T
Sbjct: 324 VATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAAT 354

[Close]

BLAST of CsaV3_5G002250 vs. TAIR 10
Match: AT5G36290.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22
Identity = 80/208 (38.46%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 173 SAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEIL 232
           S+F +I  +E+GD+TF IAAL+A R+  ATV +G   AL  MTI+S  LGR       I+
Sbjct: 87  SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 146

Query: 233 PFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGI 292
           P  +        + AA  L  +FG+  L  A  S   K+  +++  E+     SG G   
Sbjct: 147 PNLISRKH---TNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 206

Query: 293 LA------AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLA 352
                        + +F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct: 207 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 266

Query: 353 VLGGSLLGTFLSEKIIAYVGGVLFLVFA 375
           V+GGS+L + +S++ +A VGG+LFL F+
Sbjct: 267 VVGGSMLASRISQRTVATVGGLLFLGFS 284

[Close]

BLAST of CsaV3_5G002250 vs. TAIR 10
Match: AT5G36290.2 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-22
Identity = 80/208 (38.46%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 173 SAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALGAMTIISVVLGRTFHYVDEIL 232
           S+F +I  +E+GD+TF IAAL+A R+  ATV +G   AL  MTI+S  LGR       I+
Sbjct: 87  SSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGR-------IV 146

Query: 233 PFRLGDSDLPVDDIAAVCLLVYFGVTTLLDASSSDGLKAEDEQKEAELAVSKFSGNGAGI 292
           P  +        + AA  L  +FG+  L  A  S   K+  +++  E+     SG G   
Sbjct: 147 PNLISRKH---TNSAATVLYAFFGLRLLYIAWRSTDSKSNQKKEMEEVEEKLESGQGKTP 206

Query: 293 LA------AASTVVSTFALVFVAEWGDKSFFSTIALAAASSPLGVIGGALAGHGVATLLA 352
                        + +F L F+AEWGD+S  +TIALA   + +GV  GA  GH V T LA
Sbjct: 207 FRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLA 266

Query: 353 VLGGSLLGTFLSEKIIAYVGGVLFLVFA 375
           V+GGS+L + +S++ +A VGG+LFL F+
Sbjct: 267 VVGGSMLASRISQRTVATVGGLLFLGFS 284

The following BLAST results are available for this feature:

BLAST of CsaV3_5G002250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143960.2	3.8e-207	100.00	GDT1-like protein 1, chloroplastic isoform X1 [Cucumis sativus] >KGN50042.1 hypo...	[more]
XP_008437357.1	2.5e-195	94.60	PREDICTED: GDT1-like protein 1, chloroplastic isoform X1 [Cucumis melo]	[more]
KAA0042703.1	2.6e-184	94.01	GDT1-like protein 1 [Cucumis melo var. makuwa] >TYK06107.1 GDT1-like protein 1 [...	[more]
XP_038875218.1	2.1e-181	88.92	GDT1-like protein 1, chloroplastic [Benincasa hispida] >XP_038875220.1 GDT1-like...	[more]
XP_022146057.1	3.7e-162	81.63	GDT1-like protein 1, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of CsaV3_5G002250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AX5	2.7e-99	80.08	Protein PAM71, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71 PE=1 SV=2	[more]
B8AAM2	6.9e-95	75.00	GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q5NAY7	9.1e-95	74.62	GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
Q9T0H9	1.0e-37	45.62	Protein PAM71-homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAM71-HL...	[more]
Q2R2Z4	2.5e-36	46.05	GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of CsaV3_5G002250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNT2	1.8e-207	100.00	GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_5G151580 PE=3 SV=1	[more]
A0A1S3AUE3	1.2e-195	94.60	GDT1 family protein OS=Cucumis melo OX=3656 GN=LOC103482799 PE=3 SV=1	[more]
A0A5A7THF5	1.3e-184	94.01	GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G...	[more]
A0A6J1CYI6	1.8e-162	81.63	GDT1 family protein OS=Momordica charantia OX=3673 GN=LOC111015356 PE=3 SV=1	[more]
A0A6J1EQ13	1.9e-159	81.89	GDT1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111435585 PE=3 SV=1	[more]

BLAST of CsaV3_5G002250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64150.1	1.9e-100	80.08	Uncharacterized protein family (UPF0016)	[more]
AT4G13590.1	7.2e-39	45.62	Uncharacterized protein family (UPF0016)	[more]
AT4G13590.2	7.2e-39	45.62	Uncharacterized protein family (UPF0016)	[more]
AT5G36290.1	1.2e-22	38.46	Uncharacterized protein family (UPF0016)	[more]
AT5G36290.2	1.2e-22	38.46	Uncharacterized protein family (UPF0016)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001727	Gdt1 family	PFAM	PF01169	UPF0016	coord: 301..374 e-value: 1.0E-20 score: 73.8 coord: 173..256 e-value: 1.9E-19 score: 69.7
IPR001727	Gdt1 family	PANTHER	PTHR12608	TRANSMEMBRANE PROTEIN HTP-1 RELATED	coord: 76..383
IPR001727	Gdt1 family	PROSITE	PS01214	UPF0016	coord: 182..191
None	No IPR available	PANTHER	PTHR12608:SF6	PROTEIN PAM71, CHLOROPLASTIC	coord: 76..383

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G002250.1	CsaV3_5G002250.1	mRNA