CsaV3_5G000520 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_5G000520
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CS domain-containing protein
Location	chr5: 250417 .. 255599 (+)
RNA-Seq Expression	CsaV3_5G000520
Synteny	CsaV3_5G000520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCATATCATAATTTTTAATTAGAGGATCTTTTCTTCAAAGAAATAAAAGTGGAGGGTTCGAACTTCTAGCGCTTTCTCGTCTTCCTTATAAATACGTATTAGAGACTGATCTCTAAAACCCTCATCCAACCGGACCCATCATAGTCAGCGATTTAGCAATTCCCTTCATTTCTTCGCCATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGGTGAGCATTTCTCTTCTCTTCCTCTACTTGTTTGTTCTCTATTATGTGAAATTGTTATTTGTGTTGGATTGACTTGATTGATCTCACACTATCTGGAAGTGGTAAAGGGAGGGTAAACATTCATTAATTAAAATGATTGTTTGTTCTTAAATCTTAGTCAGTCAAGTGTGGCTAGATTTAACTGTTAATTGTGCTTTCAACAGGCAAGATTTGGCAATGGTAGTGAAGAAATTTGCATTGGTGATGTACCATTAGGGACAGCAATTCCATAATTCTTAGTTTGTATCGTCAATGGTTTTAGTTTGTAGTTAGCAAGTTGTTTACTTGGTTAGTGGGGTGTAGGTTAATCATAATAAATATTCATCCTATGTTCTCCGAGACTCCCTCCCTTGAATTCACAGTTCGACCTTTTGAGTTGTTCAATGTGGCCTCGAGTTCATAAGTCTTGATTGAATTTTAAGTTTAGAAGGGAAATATTTGAAATACTATTCTATTCTAGCCATATCGCGAGTTAGAAGTTATATCAATTTTTAAGGGGTATTTGGAGGGCGGAGTTAATTATTATAGTCCATGAGTTTAAATAGTTTGTTATTGGGCTGCAGACGGTTTTAGTCTCGTTATGAGGGACCTGAAATGGTAATACAGTAGGTAATGGTAGATTATAATAATTGGGAACTCCAACTGCTATAATTGGAACCCTAAACAAGGGGTGGGCTATTATAACCCACCCAAACTCTTCCTAGCGGGTTCAAGTAAATGGTTTAAGTTGATTTATTTGGAATATGTGTATGTGTGTGGATATTGGAAACCATTCTTCAGTTGAGTAAACTTATATGGAAGATTTAACTGCTGGTGTGGAGTTTGAAATTTATCATTTTGGATCGAGCATGATAATCTCTTCATGCAGTTTGATAGTTTCTGTCTTTTCTTTTCATAATGCATATGCTTCTGCACAAGATATCTAGAATTCCTCTGGAACTTAGAATTCAGTGTGAGGCTCATCGTATCAAATTTGTGAAATAAATCTTTTGTGTTGTGAGTTCAACTGACTGACCCTATCTTTTGTTTCTAAACTGAATGTCATCTCAACTTTGTTTCTTACTTCTAATGGATTTTGCAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGTATGTTTTCTCCACAGAATCTTGTTTCAACAGGGTGTTATTTTTTATTTTCAAGTTCTAAATTATCATCACATGCTTGCAGGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGGTACTTGAAGTTTTGTTAAAAAATAAGTGTGAATGATGTTAAATTCTCTTTTAGATATGGTTTATTTTTATGCTGCTCAAGTCCTTGGGAGTTGATAGCATAAATAAGAAGGGTGGATGCACAAAGTTAATTTAAAACAGTTTTTTTTTGTGTTCACTTGTGTATTGAAGTTTTTTTGTTTATTATTTGATCATGTTTATGTTTATACTTGCTGCAGAGGATGAGAGCATCGTTTCTATTCTTTTGACTAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGTAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGGTATGTATTTTGGTTGTCTATTTTCTATCTATTGCACTGCACTTATGGTTTTGTTATATTAAGCTTTTTCCTCTTCGATGCATATTTATTATTCTTCTGCATAACAAGTTTTGCTGACATGTGCACCAACATGCAAAAAGAAAAAGAAATACAATTAAATGTAATGTTGGAAGGAATGTTTCATGAAGCATTATTTGTTCACTTCCGTTGGTTCTCATAAAACAGCTGAGACACGTCTACAGTTCAAATCCCATCAGTAGTTTAGCCACAAAGAAAGAAAAAGAAAAGAAAAGAAAATCTTAGTCTCCTCCCAATATATACACTCCCCTTCACAATTCTCTAGTTACTTCATACCAAACCTTATATGCTTGCTCATGTGCCTTAATATCATTCGACCTGTTGCATATTATGCCTCAGTGGGCTTTTTAAATCTCAGTCTCTCTCTTCCCTGTCCTGAAGGAATGTGAAACCTCAGTTATGATATGGTTAAGAGTCACAGATCTTAAGGGCTTTGTGATAGAAACCGAATATATTGAAACATATAAAATAATAATATTATCATATTACTTGTGAACTACAAGTCTACAAAGTAATTGGAGGCACTTAGAACCTCCTCACCCTTGAGATATGTTAAGTTTTAACTATGCTCCATATTAAGGTTGGAGTTAAATCTCCCTCATCAAATCATTTTTGCAAAGAAAAATTATACTTCATGATTGATCTATGAACTATATGCATTATCATCAGAGACATCTCTTAGAGTTAAACGTGTTCTTGGTCTTTGCATTTGCAATTCTCAATAAATCTAGACTCATGCCTGATTATGCTGTCTAATTTCTTGTTGTTCAAGCTTGTTTTTTGGTGGCATATCCTTATGCATTTACCATTGATTGATTCGTGCGTTTGCAACCGTTGCTATGTGATATTATTTTACAATAAATTCATGATCAATCCATTTTTCTTGATTGATTTGGAAATTTTTTACAGTTCGATCAAAGGCAGAAATCTATGGGTCTTCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTTATGTCTGAGGTGATTGTTTAGAGCTGTGTGCGTGTGTTTGTTTTTGATTTATAATATCCTACAGGTTCTTTTATTGAACCTCTGAAATTGGTCCTGTGCAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAAATGGAACTGCCTGATTCTTTGACGTATAGATAAGAGAACCCAAAGATGGAAAAAAAAAACCAAAACATCTGTAGTTTTTGTTCAGGGCTGGAAAGTTTTGTGTTTTTTTAGGGAGGTTTGAATTCTAGTTATTTATGAGAATGGCGGCGTGCGCATAATTCTCATCATATATGGAACGGGATTTTGATATGATGTGTGTATGGAGTTTTACCATTTTATTTTTCATGATAATTTAGATGAGCTTTTCTCCGACTTTGGGCTAAGACTGCATGTTGGATCCGAGTGAAAGGCCCATGGGCTCCAGGGTTCATTCCAATTCAGAAAACAATCTTTTTGTGATGACGAACAGATAACTACATTTATTTCAATCTAAGTTTGATTTTTGTCAATGGCATTTAGAAGATAGAACATGCATGATTTGGCTAATTGTTTGGAGACTTTGGTAACTTCAATCCAATAAATAAATATTTTATTACATGCTTAGTTCTATGAAAAAAAAAACTTGAGAAGTAGTATTTGCTCGACTGGAATTTTCTTTGTTTTTCCAAATTTTTTCCTTTTAGGTGGGGGAAGAATGAACCAAACTACTACTTCAATGAGCCCGCGAGAGGTACTTCTGAACCAGGTACGTGGTGCTCCTTTCTAATAATTGAATTTAAATTTTAATCTTTCATCCATTCAACGGTGTAAAACTATCAATCAGGTTGTTTTGTTGTCGACAGATGTCAACCCGTGCCTTTCCGAAGGTATTTGGTCTCTTCTTAATTCCCTTTTCCAAGAAAAGGTAGAAGGTCCTACAACCCTTTGGCCATTATTGTGTTATAGCCCCACAAGCCCTATCAATGAAATGATTCTCTTTCTCTCTGACTAGTTAAAAAGGACTTGACCTTGAGAAACCTGTACCCTGGGGGGACCTCTAATCTCTCCTCCCATGTCTGAGGGGCTTGGTTTTGTACTCTTCCCCTCTAATTGACTTTGTACTATACATGCCTGCTTTTGCTGTTGTGAGTAATAAAAACCAATTTGAAACACAACATAATGGGATTAATTCTCTCTCCCACATGCTTCCCAGTAATCCCAATCTCTTTGCTTCCATCTTGGTAATATGGAAGGCATTGAGATTTCAATGTAGATGGAAATATTAAAGTCTCAATTTTTTATAGATGGAAATATCTTGTGTGTACGAAAATTGAATACCTGGGTAGTTGCATTAATTAAAGAAAGAAAGCATCTTTCTGAGTGTCCAAACCTAAAAATTTCCGTTGCAGTTTTTGTTGTACCTATTACTAACGTTTTAGAACCTATCTGGTAGAGTAATAGAGATGCTATGAGGCAGGAAACTCCACAAAGAATAGTTTAAAAAATCTTGAGGATCTTTTAATTTTTATATCTAGATTGAGATGTTCCTACTTTCTTGTTTGGTAATATTCATTAATCAATCTTTCATGAAACCAAACCAAAAAAAAAAAGATTTTGAAGATTCAGCTTCTAGACATAAGAGATCCCTGAGCCTTTTCCTGTCAGTGAAAGTGAGCTAGTTGTTTCTTATCAAAGGA

mRNA sequence

ATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCGTTTCTATTCTTTTGACTAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGTAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAATCTATGGGTCTTCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTTATGTCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAA

Coding sequence (CDS)

ATGGCGATTATCTCCGACTACGAAGAGAAGGAAGAAATCCCGAAGCCAAAGAAGCCTTCCTCTTCCTCTTCCTCCTCTCCATCATCATCTTCATCGCCCAAGCCTTCTCAATTCAATGCCAGCTTTGACCCTTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTCTTGCCAATGAGACCGATTTTCTCTCCAAGGATAGAGTCGAGAAGGACATTGAGACGGTTGTGCGTAGAGCTGTCGAGAAGAGAAAGAAGCATGATGAGTCACTTGAGCTTAAAGGTAAGGCCGAAAAGAGGATTAAGGAGGAGGTGAAGAGTGTTAAGGAGGAAGCTGCGCCGGTGAAGGCTGCTGCATCACCGCCGGAAGAGAAAGTGGGTGAGAAGTTGGAGGAAAATACCGAGGAGAAGAAAGAGGAGAACGGGGCAAGAGTTCCCAACAAAGGTAATGGTCTTGATATGGACAACTACTCTTGGACACAGTCTCTCCAAGAAGTCAATGTTAATGTACCTGTACCGAAAGGAACTAAGTCCAGGTTTGTGGTTTGTGAGATCAAGAAGAATCGTCTCAAAGTTGGACTAAAGGGTCAACCACCAGTGATAGATGCAGAGCTTTGTCATACTGTCAAGCCAGATGACTGTTATTGGAGCATAGAGGATGAGAGCATCGTTTCTATTCTTTTGACTAAGCACAACCAAATGGAGTGGTGGAAATATTTAGTTAAAGGGGATCCTGAGATTGATACTCAGAAGGTTGAGCCTGAGAACAGTAAACTATCTGATTTAGATCCAGAAACACGACAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAATCTATGGGTCTTCCAACAAGTGATGAGATGCAGAAGCAAGAGATTCTGAAGAAGTTTATGTCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATATCATAA

Protein sequence

MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS*

Homology

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BLAST of CsaV3_5G000520 vs. NCBI nr
Match: XP_011654620.1 (protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [Cucumis sativus])

HSP 1 Score: 598.6 bits (1542), Expect = 3.2e-167
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 316
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 315

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BLAST of CsaV3_5G000520 vs. NCBI nr
Match: XP_008437594.1 (PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucumis melo var. makuwa] >TYK05956.1 protein BOBBER 1 [Cucumis melo var. makuwa])

HSP 1 Score: 570.1 bits (1468), Expect = 1.2e-158
Identity = 300/315 (95.24%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+P  SSSSSPSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRP--SSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSIEDESI+SILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 316
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 313

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BLAST of CsaV3_5G000520 vs. NCBI nr
Match: XP_038874468.1 (protein BOBBER 1 [Benincasa hispida])

HSP 1 Score: 540.0 bits (1390), Expect = 1.3e-149
Identity = 288/316 (91.14%), Postives = 299/316 (94.62%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEI KPKKP  SSSSSPSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISEYEEKEEISKPKKP--SSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS+DRVEKDIETVVRRAVEKRKKH+ES ELKGKAEKRIKEEV+S+K+E   VKA A
Sbjct: 61  ETDFLSRDRVEKDIETVVRRAVEKRKKHEESFELKGKAEKRIKEEVRSIKQE---VKAVA 120

Query: 121 SPPEEKVGEKLEENT-EEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKS 180
           SPPEEK+  KLEENT EEKKE NG R PN+GNGLDMDNYSWTQSLQEVNVNVPVPKGTK+
Sbjct: 121 SPPEEKLDVKLEENTEEEKKEANGPRAPNRGNGLDMDNYSWTQSLQEVNVNVPVPKGTKA 180

Query: 181 RFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWK 240
           RFVVCEIKKNRLKVGLKGQPPVID ELCH VKPDDCYWSIEDESI+SILLTKHNQMEWWK
Sbjct: 181 RFVVCEIKKNRLKVGLKGQPPVIDGELCHIVKPDDCYWSIEDESIISILLTKHNQMEWWK 240

Query: 241 YLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKK 300
           YLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKK
Sbjct: 241 YLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKK 300

Query: 301 FMSEHPEMDFSRAKIS 316
           FMSEHPEMDFSRAKIS
Sbjct: 301 FMSEHPEMDFSRAKIS 311

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BLAST of CsaV3_5G000520 vs. NCBI nr
Match: KAG7035749.1 (Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 525.0 bits (1351), Expect = 4.4e-145
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSSSP SSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSPPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 EPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 316
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

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BLAST of CsaV3_5G000520 vs. NCBI nr
Match: XP_022995953.1 (protein BOBBER 1-like [Cucurbita maxima])

HSP 1 Score: 522.3 bits (1344), Expect = 2.9e-144
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 316
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.9e-92
Identity = 197/323 (60.99%), Postives = 234/323 (72.45%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+ EE+                 SSSS P    F A+   +NPLGFLEKVFDFL  
Sbjct: 1   MAIISEVEEE-----------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGE 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHD------ESLE-LKGKAEKRIKEEV-KSVKEE 120
           ++DFL K   E +I   VR A EK KK +      ES++ ++ KAEK I + V K V++E
Sbjct: 61  QSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKE 120

Query: 121 AAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP 180
           +     AAS  E    EK +E  EE+K+E+G  VPNKGNG D++NYSW Q+LQEV VN+P
Sbjct: 121 SVKPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIP 180

Query: 181 VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKH 240
           VP GTK+R VVCEIKKNRLKVGLKGQ P++D EL  +VKPDDCYW+IED+ ++SILLTK 
Sbjct: 181 VPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKS 240

Query: 241 NQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQ 300
           +QMEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+E+Q
Sbjct: 241 DQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQ 300

Query: 301 KQEILKKFMSEHPEMDFSRAKIS 316
           KQEILKKFMSEHPEMDFS AK +
Sbjct: 301 KQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 160/292 (54.79%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 26  SPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    + P    F ASFDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKV--GEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++        P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 ARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
             VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 AELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 265
            E  ++VKPDDC+W+IED+ ++S+LLTK +QMEWWKY VKG+PEIDTQKVEPE SKL DL
Sbjct: 185 GEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDL 244

Query: 266 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 316
           DPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 DPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot
Match: Q5ZIN1 (Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.9e-54
Identity = 136/292 (46.58%), Postives = 178/292 (60.96%), Query Frame = 0


Query: 49  GFLEK-VFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKA-----EKRI 108
           G  EK + D   +      K+R EK      R+  E+R+K + + +L  +A     E RI
Sbjct: 54  GVAEKLITDSFNHHNKLAQKERKEKK----ARQEAERREKAERAAKLAKEAKQEANEPRI 113

Query: 109 KE-----------EVKSVKE-----EAAPVKAAASPPEEKVGEKLEENTEEKKE-ENGAR 168
           KE           E+   KE        PVK++    +     K E + EEK E + G  
Sbjct: 114 KELTDEEAERLQLEIDQKKEAQKEVNNVPVKSSEDDGDSSDSNKQETDDEEKDENDKGKL 173

Query: 169 VPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 228
            PN GNG D+ NY WTQ+L E+++ +P  V    K + VV +I++ RL+VGLKG PPVID
Sbjct: 174 KPNAGNGADLPNYRWTQTLSELDLAIPFKVTFRLKGKDVVVDIQRRRLRVGLKGHPPVID 233

Query: 229 AELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 288
            EL + VK ++  W IED   V++ L K N+MEWW  LV  DPEI+T+K+ PENSKLSDL
Sbjct: 234 GELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDL 293

Query: 289 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 316
           D ETR  VEKMM+DQRQKSMGLPTSDE +KQ+ILKKFM +HPEMDFS+AK +
Sbjct: 294 DSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN 341

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot
Match: O35685 (Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-52
Identity = 127/305 (41.64%), Postives = 171/305 (56.07%), Query Frame = 0


Query: 55  FDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAA 114
           F FL  +TDF          E +  + + +   H   L  K + EKR ++E +  ++   
Sbjct: 33  FSFLRRKTDFFIGGE-----EGMAEKLITQTFNHHNQLAQKARREKRARQETERREKAER 92

Query: 115 PVKAAASPPEEKVGEKLEENTEEKKE---------------------------------- 174
             + A     E  G +++E T+E+ E                                  
Sbjct: 93  AARLAKEAKAETPGPQIKELTDEEAERLQLEIDQKKDAEDQEAQLKNGSLDSPGKQDAED 152

Query: 175 --------ENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNR 234
                   + G   PN GNG D+ NY WTQ+L E+++ VP  V    K + VV +I++  
Sbjct: 153 EEDEEDEKDKGKLKPNLGNGADLPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRH 212

Query: 235 LKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDT 294
           L+VGLKGQPPV+D EL + VK ++  W IED  +V++ L K N+MEWW  LV  DPEI+T
Sbjct: 213 LRVGLKGQPPVVDGELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLVTSDPEINT 272

Query: 295 QKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFS 316
           +K+ PENSKLSDLD ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS
Sbjct: 273 KKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFS 332

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot
Match: Q17QG2 (Nuclear migration protein nudC OS=Bos taurus OX=9913 GN=NUDC PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.0e-52
Identity = 115/229 (50.22%), Postives = 156/229 (68.12%), Query Frame = 0


Query: 93  ELKGKAEKRIKEEVKSVK----EEAAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPN 152
           EL  +  +R++ E+   K    +EA     +   P ++  E+ EE  +EK  + G   PN
Sbjct: 106 ELTDEEAERLQLEIDQKKDAENQEAQLKNGSLGSPGKQEAEEEEEEDDEK--DKGKLKPN 165

Query: 153 KGNGLDMDNYSWTQSLQEVNVNVP--VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAEL 212
            GNG D+ +Y WTQ+L E+++ VP  V    K + VV +I++  L+VGLKGQP ++D EL
Sbjct: 166 LGNGADLPSYRWTQTLSELDLAVPFCVNFRLKGKDVVVDIQRRHLRVGLKGQPAIVDGEL 225

Query: 213 CHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPE 272
            + VK ++  W IED  +V++ L K N+MEWW  LV  DPEI+T+K+ PENSKLSDLD E
Sbjct: 226 YNEVKVEESSWLIEDGKVVTVHLEKINKMEWWSRLVSSDPEINTKKINPENSKLSDLDSE 285

Query: 273 TRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 316
           TR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS+A+ +
Sbjct: 286 TRSMVEKMMYDQRQKSMGLPTSDEQKKQEILKKFMDQHPEMDFSKARFN 332

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL
Match: A0A0A0KQ62 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.5e-167
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA
Sbjct: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 316
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 315

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL
Match: A0A5A7TGM4 (Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00490 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.8e-159
Identity = 300/315 (95.24%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+P  SSSSSPSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRP--SSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSIEDESI+SILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 316
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 313

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL
Match: A0A1S3AUE5 (protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 5.8e-159
Identity = 300/315 (95.24%), Postives = 306/315 (97.14%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIISDYEEKEEIPKPK+P  SSSSSPSSSSS KPSQFNA+FDPSNPLGFLEKVFDFLAN
Sbjct: 1   MAIISDYEEKEEIPKPKRP--SSSSSPSSSSSAKPSQFNANFDPSNPLGFLEKVFDFLAN 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAA 120
           ETDFLS DRVEKDIETVVRRAVEKRKKH+ESLELKGKAEKRIKEEVKSVK+EAAP KA A
Sbjct: 61  ETDFLSNDRVEKDIETVVRRAVEKRKKHEESLELKGKAEKRIKEEVKSVKQEAAPAKAVA 120

Query: 121 SPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180
           SPPEEKVGEKLEE TEEKKE+NG RVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR
Sbjct: 121 SPPEEKVGEKLEEVTEEKKEDNGPRVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSR 180

Query: 181 FVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKY 240
           FVVCEIKKNRLKVGLKGQPPVID ELCHTVKPDDCYWSIEDESI+SILLTKHNQMEWWKY
Sbjct: 181 FVVCEIKKNRLKVGLKGQPPVIDGELCHTVKPDDCYWSIEDESIISILLTKHNQMEWWKY 240

Query: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300
           LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
Sbjct: 241 LVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF 300

Query: 301 MSEHPEMDFSRAKIS 316
           MSEHPEMDFSRAKIS
Sbjct: 301 MSEHPEMDFSRAKIS 313

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL
Match: A0A6J1K9G4 (protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 278/321 (86.60%), Postives = 297/321 (92.52%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSS PSSSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSPPSSSSS-KPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ESLELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESLELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASPPEEKV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQSLQEVN+NVPVP
Sbjct: 121 DPRNVASPPEEKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQSLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYL+KG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLIKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 316
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 320

[Close]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL
Match: A0A6J1H279 (protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.7e-142
Identity = 274/321 (85.36%), Postives = 294/321 (91.59%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+YEEKEEIPKPKKPSSSSSSS  SSSS KPSQF+A+FDPSNPLGFL +VFDFLA 
Sbjct: 1   MAIISEYEEKEEIPKPKKPSSSSSSSAPSSSSSKPSQFSANFDPSNPLGFLNEVFDFLAK 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGKAEKRIKEEVKSVKEEAAPV---- 120
           E+DFLS+DRVEK+IETVVRRAVEKRKKH ES+ELKGKAEKRIKEEV SVK+EAAPV    
Sbjct: 61  ESDFLSRDRVEKEIETVVRRAVEKRKKHVESIELKGKAEKRIKEEVGSVKQEAAPVTVKQ 120

Query: 121 --KAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVPVP 180
             +  ASP E KV  KLEE+TEEKKEENG RVPN GNGLDM+NY WTQ+LQEVN+NVPVP
Sbjct: 121 EPRNVASPSEGKVDVKLEESTEEKKEENGPRVPNNGNGLDMENYCWTQTLQEVNINVPVP 180

Query: 181 KGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKHNQ 240
           KGTKSRFVVCEIKKN LKVGLKGQPPVID EL   VKPDDCYWSIED+S++SILLTKHNQ
Sbjct: 181 KGTKSRFVVCEIKKNHLKVGLKGQPPVIDGELYQIVKPDDCYWSIEDQSVISILLTKHNQ 240

Query: 241 MEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300
           MEWWKYLVKG+PEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Sbjct: 241 MEWWKYLVKGEPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQKQ 300

Query: 301 EILKKFMSEHPEMDFSRAKIS 316
           +ILKKFM+EHPEMDFSRAKIS
Sbjct: 301 DILKKFMAEHPEMDFSRAKIS 321

[Close]

BLAST of CsaV3_5G000520 vs. TAIR 10
Match: AT5G53400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 339.0 bits (868), Expect = 4.2e-93
Identity = 197/323 (60.99%), Postives = 234/323 (72.45%), Query Frame = 0


Query: 1   MAIISDYEEKEEIPKPKKPSSSSSSSPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLAN 60
           MAIIS+ EE+                 SSSS P    F A+   +NPLGFLEKVFDFL  
Sbjct: 1   MAIISEVEEE-----------------SSSSRPMIFPFRATLSSANPLGFLEKVFDFLGE 60

Query: 61  ETDFLSKDRVEKDIETVVRRAVEKRKKHD------ESLE-LKGKAEKRIKEEV-KSVKEE 120
           ++DFL K   E +I   VR A EK KK +      ES++ ++ KAEK I + V K V++E
Sbjct: 61  QSDFLKKPSAEDEIVVAVRAAKEKLKKAEKKKAEKESVKPVEKKAEKEIVKLVEKKVEKE 120

Query: 121 AAPVKAAASPPEEKVGEKLEENTEEKKEENGARVPNKGNGLDMDNYSWTQSLQEVNVNVP 180
           +     AAS  E    EK +E  EE+K+E+G  VPNKGNG D++NYSW Q+LQEV VN+P
Sbjct: 121 SVKPTIAASSAEPIEVEKPKE--EEEKKESGPIVPNKGNGTDLENYSWIQNLQEVTVNIP 180

Query: 181 VPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYWSIEDESIVSILLTKH 240
           VP GTK+R VVCEIKKNRLKVGLKGQ P++D EL  +VKPDDCYW+IED+ ++SILLTK 
Sbjct: 181 VPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYWNIEDQKVISILLTKS 240

Query: 241 NQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEMQ 300
           +QMEWWK  VKG+PEIDTQKVEPE SKL DLDPETR TVEKMMFDQRQK MGLPTS+E+Q
Sbjct: 241 DQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFDQRQKQMGLPTSEELQ 300

Query: 301 KQEILKKFMSEHPEMDFSRAKIS 316
           KQEILKKFMSEHPEMDFS AK +
Sbjct: 301 KQEILKKFMSEHPEMDFSNAKFN 304

[Close]

BLAST of CsaV3_5G000520 vs. TAIR 10
Match: AT4G27890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 9.7e-82
Identity = 160/292 (54.79%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 26  SPSSSSSPKPSQFNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKR 85
           S    + P    F ASFDPSNP+ FLEKV D +  E++FL KD  EK+I   V  A ++R
Sbjct: 5   SEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAV-MAAKQR 64

Query: 86  KKHDESLELKGKAEKRIKEEVKSVKEEAAPVKAAASPPEEKV--GEKLEENTEEKKEENG 145
            +  E  +L+ ++ K +  EV+  K+++        P EE +   + +E    ++++E+G
Sbjct: 65  LREAEKKKLEKESVKSM--EVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESG 124

Query: 146 ARVPNKGNGLDMDNYSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVID 205
             VPNKGNGLD + YSW Q+LQEV +N+P+P+GTKSR V CEIKKNRLKVGLKGQ  ++D
Sbjct: 125 PIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVD 184

Query: 206 AELCHTVKPDDCYWSIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDL 265
            E  ++VKPDDC+W+IED+ ++S+LLTK +QMEWWKY VKG+PEIDTQKVEPE SKL DL
Sbjct: 185 GEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDL 244

Query: 266 DPETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 316
           DPETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM+++P MDFS AK +
Sbjct: 245 DPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of CsaV3_5G000520 vs. TAIR 10
Match: AT5G58740.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 41/158 (25.95%), Postives = 74/158 (46.84%), Query Frame = 0


Query: 158 YSWTQSLQEVNVNVPVPKGTKSRFVVCEIKKNRLKVGLKGQPPVIDAELCHTVKPDDCYW 217
           + W Q+L+EVN+ + +P     +   C+I+   ++VG+KG PP ++ +L   VK D  +W
Sbjct: 21  FEWDQTLEEVNMYITLPPNVHPKSFHCKIQSKHIEVGIKGNPPYLNHDLSAPVKTDCSFW 80

Query: 218 SIEDESIVSILLTKHNQMEWWKYLVKGDPEIDTQKVEPENSKLSDLDPETRQTVEKMMFD 277
           ++ED+ I+ I L K  + + W   + G  ++D    + E                     
Sbjct: 81  TLEDD-IMHITLQKREKGQTWASPILGQGQLDPYATDLE--------------------- 140

Query: 278 QRQKSMGLPTSDEMQKQEILKKFMSEHPEMDFSRAKIS 316
                         QK+ +L++F  E+P  DFS+A+ S
Sbjct: 141 --------------QKRLMLQRFQEENPGFDFSQAQFS 142

[Close]

BLAST of CsaV3_5G000520 vs. TAIR 10
Match: AT2G27280.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 52.0 bits (123), Expect = 1.0e-06
Identity = 33/87 (37.93%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 38  FNASFDPSNPLGFLEKVFDFLANETDFLSKDRVEKDIETVVRRAVEKRKKHDESLELKGK 97
           F+ASF+PSNPLGFLE V DF+  E++FL KD  EK+I   V  A E+ ++ ++  E    
Sbjct: 11  FSASFNPSNPLGFLENVLDFIGKESNFLRKDTAEKEITDAVTTAKERLRETEKKTE---- 70

Query: 98  AEKRIKEEVKSVKEEAAPVKAAASPPE 125
                  +V+ V+    P  A+  P +
Sbjct: 71  -----SMDVEKVRPSTLPFNASFDPSD 88

The following BLAST results are available for this feature:

BLAST of CsaV3_5G000520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654620.1	3.2e-167	100.00	protein BOBBER 1 [Cucumis sativus] >KGN49866.1 hypothetical protein Csa_000528 [...	[more]
XP_008437594.1	1.2e-158	95.24	PREDICTED: protein BOBBER 1 [Cucumis melo] >KAA0042552.1 protein BOBBER 1 [Cucum...	[more]
XP_038874468.1	1.3e-149	91.14	protein BOBBER 1 [Benincasa hispida]	[more]
KAG7035749.1	4.4e-145	86.60	Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022995953.1	2.9e-144	86.60	protein BOBBER 1-like [Cucurbita maxima]	[more]

BLAST of CsaV3_5G000520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LV09	5.9e-92	60.99	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]
Q9STN7	1.4e-80	54.79	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q5ZIN1	4.9e-54	46.58	Nuclear migration protein nudC OS=Gallus gallus OX=9031 GN=NUDC PE=2 SV=1	[more]
O35685	2.1e-52	41.64	Nuclear migration protein nudC OS=Mus musculus OX=10090 GN=Nudc PE=1 SV=1	[more]
Q17QG2	6.0e-52	50.22	Nuclear migration protein nudC OS=Bos taurus OX=9913 GN=NUDC PE=2 SV=1	[more]

BLAST of CsaV3_5G000520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQ62	1.5e-167	100.00	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139440 PE=4 SV=...	[more]
A0A5A7TGM4	5.8e-159	95.24	Protein BOBBER 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G004...	[more]
A0A1S3AUE5	5.8e-159	95.24	protein BOBBER 1 OS=Cucumis melo OX=3656 GN=LOC103482963 PE=4 SV=1	[more]
A0A6J1K9G4	1.4e-144	86.60	protein BOBBER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491313 PE=4 SV=1	[more]
A0A6J1H279	1.7e-142	85.36	protein BOBBER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459706 PE=4 SV=1	[more]

BLAST of CsaV3_5G000520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53400.1	4.2e-93	60.99	HSP20-like chaperones superfamily protein	[more]
AT4G27890.1	9.7e-82	54.79	HSP20-like chaperones superfamily protein	[more]
AT5G58740.1	1.2e-12	25.95	HSP20-like chaperones superfamily protein	[more]
AT2G27280.1	1.0e-06	37.93	Coiled-coil domain-containing protein 55 (DUF2040)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 157..231 e-value: 1.5E-19 score: 70.8
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 153..242 score: 16.959347
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 149..276 e-value: 5.1E-46 score: 157.9
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 140..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..152
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 28..315
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 158..242 e-value: 1.45147E-37 score: 126.893
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 28..315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G000520.1	CsaV3_5G000520.1	mRNA