CsaV3_4G036960 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G036960
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Serine-rich protein
Location	chr4: 25960866 .. 25961510 (-)
RNA-Seq Expression	CsaV3_4G036960
Synteny	CsaV3_4G036960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTACGCTCACTCTCACCGGGTGGCCGATTCTGTAACTCTCCTTCTTTGTCCTCTTCGACCTCCGCGTTTGCTTCATCTTCAACCTTTTACTCGTCTTCTTCCACTTTCCGTCACGATGACCATCGTGATTTTCCCAACCATAATCATCATACGAGATCCACATCTCCCAGCCGTGTTAATGTTTATTCGTCTCCTTCTCTTACGTCTTCTGTCCGTTTTTTTATTGATAATCGTTCGAGTTCTCCGAATCGATCGGTTATCGTTTCCAGGAAAAATAGGCCGGTGTCTAACGTCAAGAGGACTTGTATGTGCTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTTCATAAAAACGTTTCGAGTGGCGGTGGGCATAGCCAAGTGGTGTCGTTTCCTTCAACCAGATTGAATATGTGGAGATCGGCTATGGCGAATTCGATCGTAAGAATTGGCGGTGTGGAAGGAGAGTTGGTGAAACGAGCATTGACTACACTGATTCGTCCTTCTTCGCATCAGCAGAGGAGGAGAGCTTCATTTCAACCTAGATCTAGTCGTCTCTCTGTCATGTCGAAAGCCGCCGACGGCGCTTGA

mRNA sequence

ATGGTGACCTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTACGCTCACTCTCACCGGGTGGCCGATTCTGTAACTCTCCTTCTTTGTCCTCTTCGACCTCCGCGTTTGCTTCATCTTCAACCTTTTACTCGTCTTCTTCCACTTTCCGTCACGATGACCATCGTGATTTTCCCAACCATAATCATCATACGAGATCCACATCTCCCAGCCGTGTTAATGTTTATTCGTCTCCTTCTCTTACGTCTTCTGTCCGTTTTTTTATTGATAATCGTTCGAGTTCTCCGAATCGATCGGTTATCGTTTCCAGGAAAAATAGGCCGGTGTCTAACGTCAAGAGGACTTGTATGTGCTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTTCATAAAAACGTTTCGAGTGGCGGTGGGCATAGCCAAGTGGTGTCGTTTCCTTCAACCAGATTGAATATGTGGAGATCGGCTATGGCGAATTCGATCGTAAGAATTGGCGGTGTGGAAGGAGAGTTGGTGAAACGAGCATTGACTACACTGATTCGTCCTTCTTCGCATCAGCAGAGGAGGAGAGCTTCATTTCAACCTAGATCTAGTCGTCTCTCTGTCATGTCGAAAGCCGCCGACGGCGCTTGA

Coding sequence (CDS)

ATGGTGACCTCATCTTCTTCCTCGAAAACCAGATCCAGCGGCCCGGTGCTACGCTCACTCTCACCGGGTGGCCGATTCTGTAACTCTCCTTCTTTGTCCTCTTCGACCTCCGCGTTTGCTTCATCTTCAACCTTTTACTCGTCTTCTTCCACTTTCCGTCACGATGACCATCGTGATTTTCCCAACCATAATCATCATACGAGATCCACATCTCCCAGCCGTGTTAATGTTTATTCGTCTCCTTCTCTTACGTCTTCTGTCCGTTTTTTTATTGATAATCGTTCGAGTTCTCCGAATCGATCGGTTATCGTTTCCAGGAAAAATAGGCCGGTGTCTAACGTCAAGAGGACTTGTATGTGCTCTCCGACCACGCATCCAGGCTCGTTCCGGTGTAGTCTTCATAAAAACGTTTCGAGTGGCGGTGGGCATAGCCAAGTGGTGTCGTTTCCTTCAACCAGATTGAATATGTGGAGATCGGCTATGGCGAATTCGATCGTAAGAATTGGCGGTGTGGAAGGAGAGTTGGTGAAACGAGCATTGACTACACTGATTCGTCCTTCTTCGCATCAGCAGAGGAGGAGAGCTTCATTTCAACCTAGATCTAGTCGTCTCTCTGTCATGTCGAAAGCCGCCGACGGCGCTTGA

Protein sequence

MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA*

Homology

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BLAST of CsaV3_4G036960 vs. NCBI nr
Match: XP_004145523.1 (uncharacterized protein LOC101218391 [Cucumis sativus] >KGN55469.1 hypothetical protein Csa_012851 [Cucumis sativus])

HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
           PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC
Sbjct: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA 215
           TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA
Sbjct: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA 214

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BLAST of CsaV3_4G036960 vs. NCBI nr
Match: XP_008452898.1 (PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein [Cucumis melo subsp. melo])

HSP 1 Score: 382.9 bits (982), Expect = 1.9e-102
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
           P HNH TRSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVSSGGGHSQ+VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           TTLIRPSSHQQRRRA+FQPRSSRLSVMSKA D
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 212

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BLAST of CsaV3_4G036960 vs. NCBI nr
Match: XP_038899899.1 (uncharacterized protein LOC120087091 [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 198/210 (94.29%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
            +HNH  RSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRK+RPVSNVKRTCMC
Sbjct: 61  RSHNHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKSRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNV+S G HSQ VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVTSSGDHSQAVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKA 211
           TTLIRPSSHQQRRRA+FQPRSSRLSVMSKA
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKA 210

[Close]

BLAST of CsaV3_4G036960 vs. NCBI nr
Match: KAA0064614.1 (TPRXL protein [Cucumis melo var. makuwa] >TYK19978.1 TPRXL protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 12  SSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDFPNHNHHTRSTS 71
           SSGPVLRSLSPGGRFCNSPSLSSS SAFASSS+FYSSSSTFRHDDHRDFP HNH TRSTS
Sbjct: 41  SSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDFPTHNHQTRSTS 100

Query: 72  PSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 131
           PSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC
Sbjct: 101 PSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 160

Query: 132 SLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 191
           SLHKNVSSGGGHSQ+VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ
Sbjct: 161 SLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 220

Query: 192 RRRASFQPRSSRLSVMSKAAD 213
           RRRA+FQPRSSRLSVMSKA D
Sbjct: 221 RRRAAFQPRSSRLSVMSKADD 241

[Close]

BLAST of CsaV3_4G036960 vs. NCBI nr
Match: XP_022937125.1 (uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothetical protein SDJN02_13257, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 351.7 bits (901), Expect = 4.6e-93
Identity = 194/214 (90.65%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSTFYSSSSTFRHDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFAS  SS FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120
            F +H+H  RSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSS G HSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKA D
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADD 214

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BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL
Match: A0A0A0L364 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
           PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC
Sbjct: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA 215
           TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA
Sbjct: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAADGA 214

[Close]

BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL
Match: E5GCC5 (Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.0e-103
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
           P HNH TRSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVSSGGGHSQ+VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           TTLIRPSSHQQRRRA+FQPRSSRLSVMSKA D
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 212

[Close]

BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL
Match: A0A1S3BUD9 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.0e-103
Identity = 204/212 (96.23%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDF 60
           MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSS SAFASSS+FYSSSSTFRHDDHRDF
Sbjct: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDF 60

Query: 61  PNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120
           P HNH TRSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC
Sbjct: 61  PTHNHQTRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMC 120

Query: 121 SPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180
           SPTTHPGSFRCSLHKNVSSGGGHSQ+VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL
Sbjct: 121 SPTTHPGSFRCSLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRAL 180

Query: 181 TTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           TTLIRPSSHQQRRRA+FQPRSSRLSVMSKA D
Sbjct: 181 TTLIRPSSHQQRRRAAFQPRSSRLSVMSKADD 212

[Close]

BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL
Match: A0A5A7VBK5 (TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00920 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.7e-98
Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 12  SSGPVLRSLSPGGRFCNSPSLSSSTSAFASSSTFYSSSSTFRHDDHRDFPNHNHHTRSTS 71
           SSGPVLRSLSPGGRFCNSPSLSSS SAFASSS+FYSSSSTFRHDDHRDFP HNH TRSTS
Sbjct: 41  SSGPVLRSLSPGGRFCNSPSLSSSPSAFASSSSFYSSSSTFRHDDHRDFPTHNHQTRSTS 100

Query: 72  PSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 131
           PSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC
Sbjct: 101 PSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRC 160

Query: 132 SLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 191
           SLHKNVSSGGGHSQ+VSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ
Sbjct: 161 SLHKNVSSGGGHSQMVSFPSTRLNMWRSAMANSIVRIGGVEGELVKRALTTLIRPSSHQQ 220

Query: 192 RRRASFQPRSSRLSVMSKAAD 213
           RRRA+FQPRSSRLSVMSKA D
Sbjct: 221 RRRAAFQPRSSRLSVMSKADD 241

[Close]

BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL
Match: A0A6J1FFN3 (uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC111443517 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.2e-93
Identity = 194/214 (90.65%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MVTSSSSSKTRSSGPVLRSLSPGGRFCNSPSLSSSTSAFAS--SSTFYSSSSTFRHDDHR 60
           MVTSSSSSKTRSSGPVLRS SPGGRFCNS SLSSS SAFAS  SS FYSS+STFR DDHR
Sbjct: 1   MVTSSSSSKTRSSGPVLRSHSPGGRFCNSSSLSSSMSAFASSTSSNFYSSTSTFRDDDHR 60

Query: 61  DFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120
            F +H+H  RSTSPSRVNVYSSPSLT SVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC
Sbjct: 61  GFRSHHHQPRSTSPSRVNVYSSPSLTPSVRFFIDNRSSSPNRSVIVSRKNRPVSNVKRTC 120

Query: 121 MCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180
           MCSPTTHPGSFRCSLHKNVSS G HSQ  SFPSTRLNMWRSAMANSIVRIGGVEGELVKR
Sbjct: 121 MCSPTTHPGSFRCSLHKNVSSSGSHSQAASFPSTRLNMWRSAMANSIVRIGGVEGELVKR 180

Query: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKA D
Sbjct: 181 ALTTLIRPSSHQQRRRASFQPRSSRLSVMSKADD 214

[Close]

BLAST of CsaV3_4G036960 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-51
Identity = 121/214 (56.54%), Postives = 155/214 (72.43%), Query Frame = 0


Query: 5   SSSSKTRSSGPVLRSLSPGGRFCNS-----PSLSSSTSAFASSSTFYSSSSTFRHDDHRD 64
           ++SS+T+S+GPVLRS SP GRFC       PS SSS  A ++SS+F S SS F  +    
Sbjct: 3   TTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHH 62

Query: 65  FPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSP-NRSVIVSRKNRPVSN--VKR 124
             NH+HH RS SP+RVN+Y++  ++ S R+ +D+RS SP N+S+ VS+   P  N  + R
Sbjct: 63  ESNHSHH-RSASPTRVNLYTAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISR 122

Query: 125 TCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVEGELV 184
            CMCSPTTHPGSFRCSLHKNV++  G     S+ +  LNM RSAM NS+VRIGGVEGE V
Sbjct: 123 RCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 182

Query: 185 KRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKA 211
           +RALTTLIRPSSH  +RRA++QPR SRLS+M+KA
Sbjct: 183 RRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKA 214

[Close]

BLAST of CsaV3_4G036960 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 192.2 bits (487), Expect = 4.3e-49
Identity = 124/220 (56.36%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSLSPGGRFC-----NSPSLSSSTSAFASS-STFYSSSSTFRHDDH 64
           +SS  TRS+G   LRS SP GRFC       PS S S+S FASS S+ +SS ST     H
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  RDFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRP-----VS 124
               N++H  RS SP+RVN+++S  +T S R+ IDNRS SPNRS+ VS  N+P     + 
Sbjct: 64  NQ--NNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKRTCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVE 184
           + +R CMCSPTTHPGSFRCSLHKNV++  G     S+ +  LNM RSAM NS+VRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           GE V+RALTTLIRPSSHQ +RR++++PR SRL+ MSKA D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of CsaV3_4G036960 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 192.2 bits (487), Expect = 4.3e-49
Identity = 124/220 (56.36%), Postives = 154/220 (70.00%), Query Frame = 0


Query: 5   SSSSKTRSSGPV-LRSLSPGGRFC-----NSPSLSSSTSAFASS-STFYSSSSTFRHDDH 64
           +SS  TRS+G   LRS SP GRFC       PS S S+S FASS S+ +SS ST     H
Sbjct: 4   TSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSH 63

Query: 65  RDFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPNRSVIVSRKNRP-----VS 124
               N++H  RS SP+RVN+++S  +T S R+ IDNRS SPNRS+ VS  N+P     + 
Sbjct: 64  NQ--NNHHQHRSASPTRVNLFTSAPMTQSFRYSIDNRSISPNRSIAVS-SNKPSNHHKIP 123

Query: 125 NVKRTCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANSIVRIGGVE 184
           + +R CMCSPTTHPGSFRCSLHKNV++  G     S+ +  LNM RSAM NS+VRIGGVE
Sbjct: 124 DSRRRCMCSPTTHPGSFRCSLHKNVANPHGQG-TASYTTNGLNMRRSAMTNSLVRIGGVE 183

Query: 185 GELVKRALTTLIRPSSHQQRRRASFQPRSSRLSVMSKAAD 213
           GE V+RALTTLIRPSSHQ +RR++++PR SRL+ MSKA D
Sbjct: 184 GEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of CsaV3_4G036960 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-14
Identity = 63/177 (35.59%), Postives = 86/177 (48.59%), Query Frame = 0


Query: 42  SSTFYSSSSTFR--HDDHRDFPNHNHHTRSTSPSRVNVYSSPSLTSSVRFFIDNRSSSPN 101
           ++T  SS S  R      R   NH+HH R  SPS  N     +L   ++F+  +  S P 
Sbjct: 2   AATGRSSRSVLRPLSSSQRLHNNHHHHHRQRSPSPCN----KNLNLRLKFY--SPGSIPK 61

Query: 102 RSVIVSRKNRPVSNVKRTCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSF---------- 161
            SV+    N      KR C+CSPTTHPGSFRCS H+ +      +   S           
Sbjct: 62  PSVVTVSSNH---QTKRKCLCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNT 121

Query: 162 --PSTRLNMWRSAMANSIVRIGGVEGELVKRAL-TTLIRPSSHQQRRRASFQPRSSR 204
              +  LN+ + A+ NS+ +IG VE E  +R+L   L +PSS    RR  F+PR SR
Sbjct: 122 IRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of CsaV3_4G036960 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 112 SNVKRTCMCSPTTHPGSFRCSLHKNVSSGGGHSQVVSFPSTRLNMWRSAMANS 165
           S+V++ C+C+PTTHPGSFRC  H+  ++G G S+  S PS  L+M     +NS
Sbjct: 59  SSVRQNCLCAPTTHPGSFRCRYHRR-NAGLGMSRGTSVPS-NLSMLAGGDSNS 109

The following BLAST results are available for this feature:

BLAST of CsaV3_4G036960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145523.1	2.9e-108	100.00	uncharacterized protein LOC101218391 [Cucumis sativus] >KGN55469.1 hypothetical ...	[more]
XP_008452898.1	1.9e-102	96.23	PREDICTED: putative protein TPRXL [Cucumis melo] >ADN34124.1 serine-rich protein...	[more]
XP_038899899.1	1.6e-98	94.29	uncharacterized protein LOC120087091 [Benincasa hispida]	[more]
KAA0064614.1	1.8e-97	96.02	TPRXL protein [Cucumis melo var. makuwa] >TYK19978.1 TPRXL protein [Cucumis melo...	[more]
XP_022937125.1	4.6e-93	90.65	uncharacterized protein LOC111443517 [Cucurbita moschata] >KAG7024442.1 hypothet...	[more]

BLAST of CsaV3_4G036960 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G036960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L364	1.4e-108	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652810 PE=4 SV=1	[more]
E5GCC5	9.0e-103	96.23	Serine-rich protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BUD9	9.0e-103	96.23	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103493784 PE=4 SV=1	[more]
A0A5A7VBK5	8.7e-98	96.02	TPRXL protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00920 ...	[more]
A0A6J1FFN3	2.2e-93	90.65	uncharacterized protein LOC111443517 OS=Cucurbita moschata OX=3662 GN=LOC1114435...	[more]

BLAST of CsaV3_4G036960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	1.2e-51	56.54	serine-rich protein-related	[more]
AT5G25280.1	4.3e-49	56.36	serine-rich protein-related	[more]
AT5G25280.2	4.3e-49	56.36	serine-rich protein-related	[more]
AT5G20370.1	5.9e-14	35.59	serine-rich protein-related	[more]
AT3G13227.1	1.0e-05	47.17	serine-rich protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..205
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 5..211
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 5..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G036960.1	CsaV3_4G036960.1	mRNA