CsaV3_4G036820 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CGGTGAATGAAATGGGAAATTAGGGTCCGTCCGGATTTAAACCCGAAAACAAGAATGGAAGCTGTCGCTTTTACGTCTAACGGACCCACATATCCAAGAGCTAATTAAATTTTTAAAAAGTGATGAAAAATGAAATGAAATTAAAGAAAGGGAAAAAAAAAGAGTGAGAGTGGAAGGCCCACGCCGAAGCTGACAAAGAAGTGGAACAAAGAAGGGAAACCTGAACAACCACCACATAGCAAAGCCAAACCCCACTCCCTCTCTCTCTCCTTCCCTATTCCCTCTTCCCTCTCTCTCTTTCCTTTTTTTTCTCTATCTAATCTTTTTTCCCCCAATATTTATACCCTTTCTTTACTCTCTCCGCCACCCTCTTTCCCTTTTCTCTTCTTCTTTCTTTTTTTTTTCTTCCCTCATTTCCTCATCATGCTGAACCACGACCAATGGCTTTCAGCGGCCATGGCGGACGAAACCCTTGTTGCTGACTTATTGTTGAGGTTGAAGCAGTCTCAGGCTGTTTTACCTTCCAAATCTCCTCTTCCGATGTCTGTTCCGTTTACCTGGGGTATTAAGCAACCAAGGTCCAGGATGTCTACAGCTACGGCTACGGCTACGGTGCCTGTTAGATGTGGTGATGTTGTATTGAAGAGGAATAATAAGGATGTTGATTCAACTAGATGTAGTCCTACCACGCCGCTTTCATGGAGTGGTGGAGCTTCTCCTTCTGCAACGCTTGATGGTTTTGAGGAGTCCAGTCGTCCCGCTACGCTCTCTCAGGCTGCATCCAGATTTAAGGTTCTTGAGGTTTTTTTTTTTTTTTTGTTTGTTTATTATCTTCTCATTCTCTGTTGTGATTTATGCCGTCTGTTTTGGATTTTTGTAGTTTCGTCTCTTTTCTCGCGTCTGTGTGCTTTGAGTTCCCGATCTTTCTGATTTTTTTTTTTGTTTTTTTGGATATTATTTTTTACGAGTTCTCTCGATTCTTGACGACGGCGTTCTTAATTATGGTTTTTTTTATCGGCGGTGGTGTCTCGTCGGCTGCGGATTTTAAGCCGCTGGTGGCGGCGTGGATTCTCAGATGAAACATTCTTATCTCGGAGAAGCTTTAGATATTTTGTATCGTCACCGTTTTTTTCTTTTTTCATTTGCTTTTTCAAGAATCTGATTCTGTTTCGAGAAATCTCTTCTGATTTTCTTCTTCTCATTTTGTTCGTCAGTTAGTCGAAAAGAACTTCCTCTCTCAGAACTCACACACCTGCAAATCTCTCAATTCCACAATCGCCGTACTTCACCTAACAGTTTCCAATTCTCTCCATCAATGGCGGACAACCCTCACAAATCACCGTCGAGAAAACCGCTCTTTAATTCCATTAATCCACAAATAAACTCCTAGATTTTCCTAAAATTTCACTTCTCGGGTCAGCGAAAGGACGCGTGTTGAAAAATACTTAGCGTTTTCTTCTCGCCTCTTTTCGAGCTCCGTCTGTCGACTCGAAATCCATTATTTCTTCGAAATTGACCAAAACACCCTTCGAATCCCTCGCTAGATTCCAAACATTTCCAAATCGTACATCGAGTCGCTGTTTCCTCACGCACGCGATTTTGCCAATATAAACTCTCTTCCATCGCCGACGGTCCGTCTACCCAAGGACCATTCACCATAGTAAGGGCCTCGAAACTTCCCTACATCCAATCGTCCTTTCCTTTTCCTCTCTTTTTTGACCCTACTACCACTCGACGCGTAGAAGATTCATCACCAAACCGCGAGGCTATTCTTGTAATTTCCCCCACATTCCGAACCGGTCTGCTCGAACCGGCGGCCAGATTCGACCGTCGACGAAGCTACTAAATGAGGTCCCAAATCGGATCAGGTAAGAGATGAAACGCTCCCAAGAGAATAGATAGGTGTGCGTTAGGTTTGATGCAGACTTGGTTGTTTGGGGAGGGAGCAATTATCAGGTGTGGCGATGGTACACCGTTTGTTCCTGTGTTGGCTTTCTGAAATATATATATATATATATTAATAATAAAATGGAATCTTCCCAATTGTTCATGATTGATGGATAGGAGTAGAATAACAAAAAAATATACGATAACGAATTTGAATTTGGATCGTGAGTATGGTTGGGGGAAAAGATATAATTATACATAGAATTGTTTTATAAGTTGTTGAGGTGAGAAAAGGAAAAGGATGATCCACGTGACCAAGTCACGCGAGGTGGGAAAGCAAGACATGAGATGGTACGGGGTGTGGTCGCAATCTTAAAGTGACCACGTGGAGTTCATGATGTGGCGTGAGATTCTGGTAAATGTGTATTTGGGTCACATTTGTTTCCCAAATAATACTTCCATTCATTCCGGTTCTGGACAATACTTATTTTGTTTGTTGTCTAATAATAATTTATCTTAATAAGGGTAAGATAAGATGGATGCATATTCCCCATCTCTTCTTAGTGGGAGGAGAGAGAAGAGGTAATTGCTGTTGTTTCCGTTTCAAATTTTGTGCCACTTTGCTTTTTTTCCTTTCTTGTTCATATGTCTATATGTTTGCAATTTTGATTCTTATTAATGGGTTTGATAATTGGAGTTGATAATGATGATCCTCATCAATATGTTTGGAGTTGAATTTAAAGCCTGTGTTATTTGTTTTGCAATACTGATTCGAATTAATGGGCTTGAAAATGGGGTTGATTTAAACTTTTTTGTGATAATGATTCTTATCAATATGTTTTGGGGCTGGTTATACTTTTTTTGTTAGTTGTTTTGTTGGTGATATTGGTTCTTCTTCTTATTGATAGACTTTATGTTAGTGATTTTTATAATATGTTTGGTGTATGTTTTTCAGGGTGCTGCTGGAAATGAGTCGGCGGCTGGTAATACTACAAAGAGGTTAAGACGAAAGAAGGTAATTTCTTGTAGGGAAAATCAATTTTGGATTTGTTGGGGTCTGGCCGTATAAGTCAAGCATTTGTTTATTGCTGACTTTAATTGAGTTGTTGGCTTGCATTGTTCTTGATGAATGAATTGTTCAACAACCAACTGTATATCTAACTTATTTCTTTTTATGCTCTTATTTGATGACGTATTCTCTTTGTTTGTTTTCTAGACATTTGCTGAACTTAAGGAAGAGGAAAGCATCCTTTTGAAGGAGAAAATTCATCTCAAAATGGTATGAATATGATCTTCTTTTGTTATAGGAGTGGATATGTATATGCTATATATTATTTTGTTTATAAATTATAATTGGGATAAAGAACTTTAAATTTATAATTTATTTTGTATTTTCTTGATGTTTTGTTCTATATAGACAAATTAGGGGCTGTTGCCTTTTTCTTTCTTGTTGGCACTGGCACCATCTTTTGTTTTTGAGGACCTAACTTACTTTTTGAACAGGAACTGGCCACTTTAAGGGCAAACTTAGAAGAACAAAGAGCCAAGAATGAGAGTCTGAAGAAAATGAAGGTAATTTCTACCTCTCTCTCTCTCTTTTTTTAATCAACATGTCTGCTGCTTTCTTTTTCCATGAACATTTGAGTTATACTGTCTTTTTGTCATTGTAAAGTTATGAAAAGATTGATAGAAAAAAAAAGTGTTCGAAAGATGTTGACATTTCACAACCAATATTCTCTTTCTTTATCAAACAAATCACTTGATTTTCCTACCAAGGCTCTTCTGAGAACAATAAATCTCACTTCATGCAGGTAGATCTCAACTTCAAATACACAGAGAAATTCATTACAAACTCCAATATGATGATGACGACGACGACGATGATGCCAGAAGAATCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTTCACCCACATTGCCATTCACAACATCAGGATCAGGTTCTTCCGAGGCTCAATCGCAAAAGAACTTGAAATCAACCGAAGAAGATTGTGTCTTTCTCTTGCCAGATTTAAATATGATACCCTCAGAAGATTAACTAAGATCAAAATACATTGACTCTCTCTCTCTCTCTCGTTCTTGTTTTTCGTTCTTGCTAATATGATGACATGGACAGGCACTGATTGTGAAGCCATGAGAGCTCCAATGGCTTTACAATTTGTTGATGGCAAAAAAAGTTTGCCGTCTTGTAGAAGAACATTCAATTCAGTCTGTTAGCATTTGTTAATTCCTGTGTTTCTTACCATATTTTTTTAAGGATGTAACTCTGTGGGTTAAACAAATTGTTGAATCCCTCTAGAAGAATGGTGTAGGGTTGATTCATTCGTTGTAGCGTTTATTATATAGGTACATAGTTACTTAATTTGATTGTCATGACTTTGTTGTTATAAAAGTTGTTATTTTTTTACCATTTTTACTCTTTTTGTGCTTTCTTACTCATTATGTTCACTCACAAGTGCTTTGATGCAAAGCATTAGCACGACTTGGTTTGAATTAGTGTGTTAAATCAATGATAAAGTTTTAGTTCTAACAATGAGAGAGACCCACTCATGAGAAAGTGTGTTTGATGTATTGATGAGGCACTATACGATGAACAGAATATAGTTTAAATATTA ATGCTGAACCACGACCAATGGCTTTCAGCGGCCATGGCGGACGAAACCCTTGTTGCTGACTTATTGTTGAGGTTGAAGCAGTCTCAGGCTGTTTTACCTTCCAAATCTCCTCTTCCGATGTCTGTTCCGTTTACCTGGGGTATTAAGCAACCAAGGTCCAGGATGTCTACAGCTACGGCTACGGCTACGGTGCCTGTTAGATGTGGTGATGTTGTATTGAAGAGGAATAATAAGGATGTTGATTCAACTAGATGTAGTCCTACCACGCCGCTTTCATGGAGTGGTGGAGCTTCTCCTTCTGCAACGCTTGATGGTTTTGAGGAGTCCAGTCGTCCCGCTACGCTCTCTCAGGCTGCATCCAGATTTAAGGGTGCTGCTGGAAATGAGTCGGCGGCTGGTAATACTACAAAGAGGTTAAGACGAAAGAAGACATTTGCTGAACTTAAGGAAGAGGAAAGCATCCTTTTGAAGGAGAAAATTCATCTCAAAATGGAACTGGCCACTTTAAGGGCAAACTTAGAAGAACAAAGAGCCAAGAATGAGAGTCTGAAGAAAATGAAGGTAGATCTCAACTTCAAATACACAGAGAAATTCATTACAAACTCCAATATGATGATGACGACGACGACGATGATGCCAGAAGAATCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTTCACCCACATTGCCATTCACAACATCAGGATCAGGTTCTTCCGAGGCTCAATCGCAAAAGAACTTGAAATCAACCGAAGAAGATTGTGTCTTTCTCTTGCCAGATTTAAATATGATACCCTCAGAAGATTAA ATGCTGAACCACGACCAATGGCTTTCAGCGGCCATGGCGGACGAAACCCTTGTTGCTGACTTATTGTTGAGGTTGAAGCAGTCTCAGGCTGTTTTACCTTCCAAATCTCCTCTTCCGATGTCTGTTCCGTTTACCTGGGGTATTAAGCAACCAAGGTCCAGGATGTCTACAGCTACGGCTACGGCTACGGTGCCTGTTAGATGTGGTGATGTTGTATTGAAGAGGAATAATAAGGATGTTGATTCAACTAGATGTAGTCCTACCACGCCGCTTTCATGGAGTGGTGGAGCTTCTCCTTCTGCAACGCTTGATGGTTTTGAGGAGTCCAGTCGTCCCGCTACGCTCTCTCAGGCTGCATCCAGATTTAAGGGTGCTGCTGGAAATGAGTCGGCGGCTGGTAATACTACAAAGAGGTTAAGACGAAAGAAGACATTTGCTGAACTTAAGGAAGAGGAAAGCATCCTTTTGAAGGAGAAAATTCATCTCAAAATGGAACTGGCCACTTTAAGGGCAAACTTAGAAGAACAAAGAGCCAAGAATGAGAGTCTGAAGAAAATGAAGGTAGATCTCAACTTCAAATACACAGAGAAATTCATTACAAACTCCAATATGATGATGACGACGACGACGATGATGCCAGAAGAATCTTCATCCACACTAACCCATCAAAGGGAAAGCTCTTCACCCACATTGCCATTCACAACATCAGGATCAGGTTCTTCCGAGGCTCAATCGCAAAAGAACTTGAAATCAACCGAAGAAGATTGTGTCTTTCTCTTGCCAGATTTAAATATGATACCCTCAGAAGATTAA MLNHDQWLSAAMADETLVADLLLRLKQSQAVLPSKSPLPMSVPFTWGIKQPRSRMSTATATATVPVRCGDVVLKRNNKDVDSTRCSPTTPLSWSGGASPSATLDGFEESSRPATLSQAASRFKGAAGNESAAGNTTKRLRRKKTFAELKEEESILLKEKIHLKMELATLRANLEEQRAKNESLKKMKVDLNFKYTEKFITNSNMMMTTTTMMPEESSSTLTHQRESSSPTLPFTTSGSGSSEAQSQKNLKSTEEDCVFLLPDLNMIPSED* Homology
BLAST of CsaV3_4G036820 vs. NCBI nr
Match: XP_004145517.1 (uncharacterized protein LOC101216814 isoform X2 [Cucumis sativus] >KAE8649947.1 hypothetical protein Csa_012270 [Cucumis sativus]) HSP 1 Score: 505.4 bits (1300), Expect = 3.1e-139 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. NCBI nr
Match: XP_031739969.1 (uncharacterized protein LOC101216814 isoform X1 [Cucumis sativus]) HSP 1 Score: 500.0 bits (1286), Expect = 1.3e-137 Identity = 270/273 (98.90%), Postives = 270/273 (98.90%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. NCBI nr
Match: XP_016901256.1 (PREDICTED: uncharacterized protein LOC103493773 isoform X1 [Cucumis melo] >KAA0064606.1 uncharacterized protein E6C27_scaffold255G003280 [Cucumis melo var. makuwa] >TYK19986.1 uncharacterized protein E5676_scaffold134G001010 [Cucumis melo var. makuwa]) HSP 1 Score: 464.5 bits (1194), Expect = 6.1e-127 Identity = 255/272 (93.75%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. NCBI nr
Match: XP_038897737.1 (uncharacterized protein LOC120085676 [Benincasa hispida] >XP_038897738.1 uncharacterized protein LOC120085676 [Benincasa hispida]) HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115 Identity = 238/285 (83.51%), Postives = 248/285 (87.02%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. NCBI nr
Match: XP_023536611.1 (uncharacterized protein LOC111797733 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 369.4 bits (947), Expect = 2.7e-98 Identity = 210/276 (76.09%), Postives = 228/276 (82.61%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. ExPASy TrEMBL
Match: A0A0A0L0G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652680 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.8e-132 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. ExPASy TrEMBL
Match: A0A5A7VE69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001010 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127 Identity = 255/272 (93.75%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. ExPASy TrEMBL
Match: A0A1S4DZ38 (uncharacterized protein LOC103493773 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493773 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.0e-127 Identity = 255/272 (93.75%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. ExPASy TrEMBL
Match: A0A6J1FA47 (uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC111443668 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 2.9e-98 Identity = 207/276 (75.00%), Postives = 228/276 (82.61%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. ExPASy TrEMBL
Match: A0A6J1IIT2 (uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 8.4e-98 Identity = 208/275 (75.64%), Postives = 226/275 (82.18%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28 Identity = 102/273 (37.36%), Postives = 142/273 (52.01%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 109.0 bits (271), Expect = 6.1e-24 Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21 Identity = 78/205 (38.05%), Postives = 108/205 (52.68%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 96.3 bits (238), Expect = 4.1e-20 Identity = 69/166 (41.57%), Postives = 93/166 (56.02%), Query Frame = 0
BLAST of CsaV3_4G036820 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 1.7e-10 Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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