CsaV3_4G035280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G035280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Growth-regulating factor
Location	chr4: 24854251 .. 24858183 (-)
RNA-Seq Expression	CsaV3_4G035280
Synteny	CsaV3_4G035280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGACATTTTGTGTAATTTAACCTAAACTAAAAATATTTAGTAACATCATAGCAAAATAGAGCGTTATAAATATTTGAGTGTCATTTAAAGAGAAATTCCCTTAAAAAAATGGATAACTTGGCACTGAAACCACATGCTCAAAATACTGGATTCGTTAATTTCGGTTCGTTACAACAAGTTCATCAACTATCAATTTCTGTACGTTTGAAAGCCCAATTACAGCTGCCGATGGCTAATATAGATATCTTCTTCTGCAGATAATCAGCATTCGATTTCCCCCAAAATGCCCATTTTTTACATATTTAAACACAAAGAAATCCATCAAATACAATCCAACTCGCACTCGTTCTTCAATCGCCATGGCCAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCCAACGAAAACCAACGTTCCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAGCCGCAATCGCAACCAAGCCCTACCGCAAGCTTGTTCGAAATCGAGGCAACTATGTTGAAATTGCCTTCGCCACCATGCCGATCGGAGAGTGCTAGACTTTCCGGCGACTACAGTGGGCTGATTACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCGAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAGAAATGTAGGAACAGCCGGTCGATTAATGGTGCTTCCGCCACAAATGGTGCTAAACGTCCCAATATTATAAGAAGAGTACTTTTTTCGCTATCACGTAAGTGCTTCGCTTCATCTCTATTTTTGTTTTAATGTATATATTTTATTTTATTTATCTTTATAGAAGCCTATGTGTACGTGTGTTTCTATTTTGAAAATAACTAAATAATAGTGTTTCCCGTATTCTACAATGTTCACTCTTTTTTTTTTCAAATAAGAAAAACTTTTCAAGTACACTTCAATTGTATTTGTTTTCATTTTTACGGTTATAATAATTAAATCTATAACATATATATTTATTGTTTGTAAAAATGACACTAATGTCCTAGTTACCGATACACATCTCATATATTTCATGCAAATTTTATTGTATAATTAACTATAACTGTAAAATTATTGAAAAAATTAAAATCATGAGTAAATATATCGATCAACAAATACATATAATATAAGTATATAAAGTAAAACGTATCCTAATTAATATACAATTGATACATTAAAATAATTTAATACAATACAAAAGAAAGTAATTAGTGGATTCCTAATAGCACTATAGCGGTACATCACTTCAAAATAAAAAAATAAAACTTAAAAAATAATTCAAATCGTTGAAAAATACGAAAGTTAACTAAACTCTTGAACCATTGGGATGAAATCGAAATTTTATTAATCCTTATATGAGTTTTGAACGACTTGACAAACAGTTAACAAAAGAAGACGTTCTAACTGATCTCGATAACCAATTAAAATTTATCGGAAGAAGTAGAACGAGGAATAACGAATTGCAGATAACATAAGAAAATGATGACCATGACTTTAAAAAGTGTGAGAATGAAAACTATGAAAGATGGTTTGTAAATAATAAAAATTTTATGATGAAAAATACTGTCAAGAATGAGAGTAAAATTTTACCCTATTTACATAATTATGAGATTGTGTATCATATATGTTATAAAAAATTCTAAAAAAAACGAGAGAATAAGTATGCTATTGAATTGAATGATAGTTTTGAGAACAATAACAAATTTAATATTAAAATTATTTTAAAAAAATTGCTGTCATATTTGCGAAATTTTAAAACCACTGTCAATATTACTTAAAAAAAAGCTACCAATTACAATTTTTAGTTTTAAAACATTTATAAAGTGTAGATAGCAAACCAAAAGAATTATAAATAAAACACTTCTAGCAACCAAATAAAAATGATATTTGTAAATTTAAATGTAATACAATTGAATTAAAGTTAGGTTATTGCAAGTATATCCACGAAAGATAATATATTCAAAATTACTTGTATCCACCAAAGATAATATATTCAAAATTACTTGTAATCATAACAAAATTTAGTAAATTATAGATGATATTGTTTGATGACATATTTATTTTAGGAAAGAATTGTTATAGATGACAAAAATAAATTAAATTATTTATAATATACATAGGGAGAGACTTAAATTGATCAGAGAGTGGATGGATTTTGGTAGTAACTAATTTAAACTTCATATGGTCATTGATGTGATTCATATGCCTCGTCTATTATTTTGTTTTTTTAGTTTTGTTATTTTATAGGGAAATGGGATGCTCGAGATTAACTTTGTGATTATAGAATAAATGGATTATCTTATAATTTTTCCATATTTTACCAATATAAGCAATTATTTATAACACAATGCTATATATACTTGCCTATTGCCCCTAAAATATTTATCTTTAAATTTAGGATATGTACAATCTATAAAAGAAAATGAAATTCAAATAAATAATAAAAACATTGAACTAAAATTAAAAGGTTTGTAGTGCACGGCATCTTTATTTATTTATTCCTTTTATTGCAAGATAAATAAATATAATGTTAAAAGTCTTTAGTTCCTCTTAGTGAGTAACGAAGCATATTAAATATATGGAGGTAGTCAAATCAGAAACTGCCGTGACACATTGGCCCTTTCTCATTTGTTTGAGCTCCTAAAGTCCCAATGAATGAACAAACAAACAAAGTTTATCATCCTACTTTTAATAATAAAAGTTACCTTCGAACATGATCCTCAAAAATATAATACATGTTTATGTATTAACGTATGAATTTGGATGGTTGACTGACTTGAAAATGATCACATGTAATGTAACATAATGTATTTATTTTTAAGTTTAAAATAAATTAGAGAGTTATGTTCAAACTTCACTTATGGTTTGATTCAAGAAGTTTATGATTTCCATAACATTTTAAAAAAACATCAATTTTGTATTTTATCAACTTATTATAAGTTTACAGTCTTATAAACTTCATAACTTTATACTCATTGTTGTTCCATACTTACCCTAGACACCTTCAATGTACTTACTGATTATATAAAATAGATATAATCAATAAACAAAAAGAGAAGTGTTAGAGCAAGAAGGTCACCAAGTAGCATGCTCCTAAAAGTATGTAACAACTAATCTAAACAAAACTAAATTTTTGTTCGATGAATATTCAAGATGAAACTATACAATTGTTTGTTCAATGAAACAATCGTTCATAATGCAACTAAAAATTCTATTAATAAATGAAAAAAAATTATAATAACGCATATACAATACAGATGAAAAGCACGGTCTTGATTGAATTTAAGAAATAATGGTATGGGAAAAGACTTTAAGGAATTTTAAAATATAAGAAAAACATATTATAAAATATAAATGGCATATTGGAGAATTGATTAAGAGATGTGTTTTTGTTTTCATTAGATGGAAAATGAATGTAAATCATATTGTATAGTATATGGCTTTGCTTGTTTGTCTCGTCTCTACCGAGTCCACTCCCCACCTTGTCTCTTCCCTATGTCTTTGAATTCGTCAACAATTTATTTTTTTAAGGAAGATTTATAGCTAATTTTGGGTTGAACAACCAAGCCAAAGCAAATTGCAGATTACTGCTTCTTTATTTTTTCATACGAGTTTCTGTAAACATATTATGATGTTCATTAATTAAAATTTGATTTGTTCGTAGGATTTTGGTGCTGATTGAAATGGAGTGTTCGTATAATTGCATTTTATGGGTATGCACTTTTTTTTTTTGTAATAGATGAATAAGAGATTGTTCGTGTTTGAAAGTTTCAGAATTTAATGTTCCAACCATATAAGCTATTATACATTCAGTGAAGATCAATTAATACAAACTTG

mRNA sequence

ATGGCCAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCCAACGAAAACCAACGTTCCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAGCCGCAATCGCAACCAAGCCCTACCGCAAGCTTGTTCGAAATCGAGGCAACTATGTTGAAATTGCCTTCGCCACCATGCCGATCGGAGAGTGCTAGACTTTCCGGCGACTACAGTGGGCTGATTACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCGAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAGAAATGTAGGAACAGCCGGTCGATTAATGGTGCTTCCGCCACAAATGGTGCTAAACGTCCCAATATTATAAGAAGAGTACTTTTTTCGCTATCACGATTTTGGTGCTGA

Coding sequence (CDS)

ATGGCCAGTTCTCGTCCAATAGAGATTGATTTCGAATTCCTTCCAACGAAAACCAACGTTCCTTTCTCTTGGGAAGCCAAGCCCGGCGTTCCGAAGCCGCAATCGCAACCAAGCCCTACCGCAAGCTTGTTCGAAATCGAGGCAACTATGTTGAAATTGCCTTCGCCACCATGCCGATCGGAGAGTGCTAGACTTTCCGGCGACTACAGTGGGCTGATTACCTATTCTCCTCCACGTTGCAGGGCGGAGAGTGCGAGAATGGCGAAGGATTTTCTGTGGCTTGAAGCTTATTCCGACGGCTCTGCATCGTCTTTTGGATTCGGGTGCTGTAAATCGGATGATTCGAAGAAGACGGATCCTTTTGTTGAAGCTTACAAGAAATGTAGGAACAGCCGGTCGATTAATGGTGCTTCCGCCACAAATGGTGCTAAACGTCCCAATATTATAAGAAGAGTACTTTTTTCGCTATCACGATTTTGGTGCTGA

Protein sequence

MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC*

Homology

[Close]

BLAST of CsaV3_4G035280 vs. NCBI nr
Match: XP_004141298.1 (uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetical protein Csa_012140 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
           MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
           ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC 162
           FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC
Sbjct: 121 FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSRFWC 161

[Close]

BLAST of CsaV3_4G035280 vs. NCBI nr
Match: KAA0064469.1 (hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK20119.1 hypothetical protein E5676_scaffold134G002440 [Cucumis melo var. makuwa])

HSP 1 Score: 261.5 bits (667), Expect = 4.7e-66
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 19  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPP 78
           NVPFSWEAKPGVPKPQSQPSP+ASLF  E +MLKLPSPPCRSESARLSGDYSGLITYSPP
Sbjct: 2   NVPFSWEAKPGVPKPQSQPSPSASLF--ETSMLKLPSPPCRSESARLSGDYSGLITYSPP 61

Query: 79  RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRS----- 138
           RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKC NSRS     
Sbjct: 62  RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRG 121

Query: 139 INGASATNGAKRPNIIRRVLFSLSRFWC 162
           I G SATNG KRPNIIRRVLFSLSR  C
Sbjct: 122 ITGGSATNGVKRPNIIRRVLFSLSRKCC 147

[Close]

BLAST of CsaV3_4G035280 vs. NCBI nr
Match: KAG7037747.1 (hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 205.3 bits (521), Expect = 4.0e-49
Identity = 110/165 (66.67%), Postives = 120/165 (72.73%), Query Frame = 0


Query: 2   ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSE 61
           +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FEI A  LKLPSPP RSE
Sbjct: 6   SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFEISA--LKLPSPPYRSE 65

Query: 62  SARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPF 121
           SARL  DY   I  S P  RA+SARMAK+ LWL+AYSD   SSFGFGCCK D  K+TDPF
Sbjct: 66  SARLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPF 125

Query: 122 VEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC 162
           VEAYKKC     +N R I G SATNG KRP I RR+LFSLSR  C
Sbjct: 126 VEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCC 166

[Close]

BLAST of CsaV3_4G035280 vs. NCBI nr
Match: KAG6608406.1 (hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 202.6 bits (514), Expect = 2.6e-48
Identity = 109/165 (66.06%), Postives = 119/165 (72.12%), Query Frame = 0


Query: 2   ASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSE 61
           +SS P++ DFE L T+TNVPFSWEAKPGVPK QS  SP  S FE  A  LKLPSPP RSE
Sbjct: 6   SSSHPLDFDFELLQTRTNVPFSWEAKPGVPKLQSSSSPNVSTFERSA--LKLPSPPYRSE 65

Query: 62  SARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPF 121
           SARL  DY   I  S P  RA+SARMAK+ LWL+AYSD   SSFGFGCCK D  K+TDPF
Sbjct: 66  SARLPDDYGEAIPCSSP--RAKSARMAKEHLWLQAYSDDFGSSFGFGCCKRDGLKETDPF 125

Query: 122 VEAYKKC-----RNSRSINGASATNGAKRPNIIRRVLFSLSRFWC 162
           VEAYKKC     +N R I G SATNG KRP I RR+LFSLSR  C
Sbjct: 126 VEAYKKCTNGPSKNRRPIGGGSATNGVKRPGIRRRLLFSLSRKCC 166

[Close]

BLAST of CsaV3_4G035280 vs. NCBI nr
Match: OAY51045.1 (hypothetical protein MANES_05G183500v8 [Manihot esculenta])

HSP 1 Score: 61.2 bits (147), Expect = 9.3e-06
Identity = 49/142 (34.51%), Postives = 64/142 (45.07%), Query Frame = 0


Query: 17  KTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYS 76
           K NVPFSWE KPGV K  SQ      +F  EA  +KLP PPC  E+             S
Sbjct: 9   KGNVPFSWEKKPGVSKAISQ------MFHSEADFVKLPPPPCLIEN------------QS 68

Query: 77  PPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSING 136
           P R      ++       +  S  S+   G         K+ DPF+ AYK+C  S S + 
Sbjct: 69  PARVSTHDIQIPLPPCTFQPPSRSSSRKGGL-------KKQEDPFLAAYKECTKSTS-DS 124

Query: 137 ASATNGAKRPNI-IRRVLFSLS 158
              T G    N+ +R+ +FSLS
Sbjct: 129 NKKTGGKLCRNVGLRKGMFSLS 124

[Close]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL
Match: A0A0A0KZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.3e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60
           MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS
Sbjct: 1   MASSRPIEIDFEFLPTKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRS 60

Query: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120
           ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP
Sbjct: 61  ESARLSGDYSGLITYSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDP 120

Query: 121 FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR 159
           FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR
Sbjct: 121 FVEAYKKCRNSRSINGASATNGAKRPNIIRRVLFSLSR 158

[Close]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL
Match: A0A5D3D9E3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002440 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 132/148 (89.19%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 19  NVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYSPP 78
           NVPFSWEAKPGVPKPQSQPSP+ASLF  E +MLKLPSPPCRSESARLSGDYSGLITYSPP
Sbjct: 2   NVPFSWEAKPGVPKPQSQPSPSASLF--ETSMLKLPSPPCRSESARLSGDYSGLITYSPP 61

Query: 79  RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRS----- 138
           RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKC NSRS     
Sbjct: 62  RCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCTNSRSMSGRG 121

Query: 139 INGASATNGAKRPNIIRRVLFSLSRFWC 162
           I G SATNG KRPNIIRRVLFSLSR  C
Sbjct: 122 ITGGSATNGVKRPNIIRRVLFSLSRKCC 147

[Close]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL
Match: A0A2C9VZY0 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G183500 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 4.5e-06
Identity = 49/142 (34.51%), Postives = 64/142 (45.07%), Query Frame = 0


Query: 17  KTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLSGDYSGLITYS 76
           K NVPFSWE KPGV K  SQ      +F  EA  +KLP PPC  E+             S
Sbjct: 9   KGNVPFSWEKKPGVSKAISQ------MFHSEADFVKLPPPPCLIEN------------QS 68

Query: 77  PPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSING 136
           P R      ++       +  S  S+   G         K+ DPF+ AYK+C  S S + 
Sbjct: 69  PARVSTHDIQIPLPPCTFQPPSRSSSRKGGL-------KKQEDPFLAAYKECTKSTS-DS 124

Query: 137 ASATNGAKRPNI-IRRVLFSLS 158
              T G    N+ +R+ +FSLS
Sbjct: 129 NKKTGGKLCRNVGLRKGMFSLS 124

[Close]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL
Match: A0A5D2RQL1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G145800v1 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05
Identity = 40/136 (29.41%), Postives = 59/136 (43.38%), Query Frame = 0


Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLIT 75
           ++ NVPFSWE KPGV K  S+ S      +I    +KLP PPC S+S R    +  G++ 
Sbjct: 8   SQVNVPFSWELKPGVSKVTSEDSS----IDISHVTVKLPPPPCLSKSDRFCVNNLKGVLN 67

Query: 76  YSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSI 135
             P + R +  R +                      K + + + DPFV AY+KC    + 
Sbjct: 68  VPPCQLRPKPTRSSAK--------------------KGNVNSQDDPFVAAYRKCTEQSAD 119

Query: 136 NGASATNGAKRPNIIR 151
           +     N A     +R
Sbjct: 128 DSTDDENDASSGTTMR 119

[Close]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL
Match: A0A7J9BCP7 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_018033 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 3.8e-05
Identity = 40/136 (29.41%), Postives = 59/136 (43.38%), Query Frame = 0


Query: 16  TKTNVPFSWEAKPGVPKPQSQPSPTASLFEIEATMLKLPSPPCRSESARLS-GDYSGLIT 75
           ++ NVPFSWE KPGV K  S+ S      +I    +KLP PPC S+S R    +  G++ 
Sbjct: 8   SQVNVPFSWELKPGVSKVTSEDSS----IDISHVTVKLPPPPCLSKSDRFCVNNLQGVLN 67

Query: 76  YSPPRCRAESARMAKDFLWLEAYSDGSASSFGFGCCKSDDSKKTDPFVEAYKKCRNSRSI 135
             P + R +  R +                      K + + + DPFV AY+KC    + 
Sbjct: 68  VPPCQLRPKPTRSSAK--------------------KGNVNSQDDPFVAAYRKCTEQSAD 119

Query: 136 NGASATNGAKRPNIIR 151
           +     N A     +R
Sbjct: 128 DSTDDENDASSGTTMR 119

The following BLAST results are available for this feature:

BLAST of CsaV3_4G035280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141298.1	1.3e-87	100.00	uncharacterized protein LOC101203728 [Cucumis sativus] >KAE8649894.1 hypothetica...	[more]
KAA0064469.1	4.7e-66	89.19	hypothetical protein E6C27_scaffold255G001840 [Cucumis melo var. makuwa] >TYK201...	[more]
KAG7037747.1	4.0e-49	66.67	hypothetical protein SDJN02_01378, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6608406.1	2.6e-48	66.06	hypothetical protein SDJN03_01748, partial [Cucurbita argyrosperma subsp. sorori...	[more]
OAY51045.1	9.3e-06	34.51	hypothetical protein MANES_05G183500v8 [Manihot esculenta]	[more]

BLAST of CsaV3_4G035280 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZZ9	8.3e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G644720 PE=4 SV=1	[more]
A0A5D3D9E3	2.3e-66	89.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2C9VZY0	4.5e-06	34.51	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G183500 PE=4 SV=...	[more]
A0A5D2RQL1	3.8e-05	29.41	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A01G145800v1 P...	[more]
A0A7J9BCP7	3.8e-05	29.41	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_018033 PE=4 ...	[more]

BLAST of CsaV3_4G035280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33696	T22J18.15-RELATED	coord: 13..156
None	No IPR available	PANTHER	PTHR33696:SF12	BNAA08G25910D PROTEIN	coord: 13..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G035280.1	CsaV3_4G035280.1	mRNA