CsaV3_4G034280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G034280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein TIC 22, chloroplastic
Location	chr4: 24284393 .. 24290697 (+)
RNA-Seq Expression	CsaV3_4G034280
Synteny	CsaV3_4G034280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTTCTAAAAGGTATCGTCGTAAACATTTCTCTTTCACTCATTTTTTACAAAAGAGTTTTATAAAACATGATTAGGTGTTGTAAATATTTTTCAATATCAAATTGGAATGAAAACGTTGAAAGAGGAAAAAAACGCACAAACAAAACAAGATGAAAAACTCAAATTTTGGAAGAGGGCAGAGAGTCTGAAAAGGCTAATTTAATTTATAGATTTTAGGTAAAATTTTGTGCAAAAACCATAAATATTGGACATAATAAAAGCGCATATCCACGCGAGAATCGGGGGTTTCTCGTGGCCATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTCATATCCGTTTCTTCTTTCATCCACCATCACTGTACCAAACTTGGAGCCGAGCTTTCCAATCGTCTCGAAGACACCAAACGCTTCGCCGGAACTCTCGCCAGAAGATGGCCGGCCCAGGCGAATTGGCGATCATTTCCTACACCTGCTTTCGCATCCCTTGCGCGCCACACGCATGCCTTGGCTGCCACTCTTAGCCCCGACCAAGTGGCGAAGTCCCTCGTCGGCACGGCGGTATACACTGTTAGCAATTCAAATAATGAGTTTGTGCTCATTTCTGATCCCAATGGTGCCAAGTCAATTGGGTTGCTGTGCTTTCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTTTGTTTTGCCCCTGGTTTTCCTCCCATTTGTGTAGAGTGAAATGATAATGAAGAAGTGAGGAAAACTTGTCGCAATCTATTTTGTGCTTCCCCTATTTAGTGGAATTTGTGTTTGATGTTTTCGATAATTTAATGAACTAGAAGTAGGTTTACCATTCTAATTCTTTTGTTCAAATCTGATGTTTTTATTGCAATATGATATCTGATTATAGTGAATTTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCCAAGGTTGTACCTATTACCCTTGACCAGGTACCTTACTTGTATTATCAAATTTTTACTTCTTGAGTACCGAACTTTTTCCCTGCTGCAGTTATTTTGTTTTCCCCACTTAACGTTCAACCGTTTAGTGGAATTCCATAGTGAAGGTTAGTGTGGCTGGTAGGTAACTGCATTTATAGGCTTGTGCTAGTACTCCTGATCAATGATATGACAATGAGAGCCGAGAGGAGCATTTACCTGGTGAGATAACTCCGTTTTATTTTTAGTCATCTGGCTGGTGAAAATTTTCAAATCTAAGGCCTATTAATTTGAATGTATCTAAATTTGTTGGGTTGGAAGATTTCAAATAAATAGGTTGAACTTATAAAACACAGAATTTAAATATGATGGTGAAGTGAAGTATCTGTTTTGCCTTTTCTTTTTCTTCCTTTATTAGGGGGCGTGGGGCAGGGTTTGAAATTTAATAATTTTGTGAGAAGGTACTCAATTAGAATTCAACCTGATTTTTCTATTGCCCGTGTATTATCTATTGCCAATAACCGGGGTGTCCTCCTTCAGTTTCTCTCTTTCTTCTGTACTTCAGTAGATTTATTTGTTTCTGTTCGTTTTTTATGATTCACAGGTATATTTGTTGAAAGTTGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTATTCAGCTTAAGAATGCGTTAGAGGCAAGTTTCATTTGATCTTGTCATTCTCTTGGTGTTAAGACATAGGGTTGTGTCGATCTTATGCTATATTTTATATTCTTTCACTCCGTATCTAAATTTTAAATTCTATAACAATACCAATACTAGTAAGCTAGGAAGCATAGATACCAACACGACACACACCATTTTTCAAAAAGTAGGACACGACATGTCGAGACACATTTAAGTATATGTCATGCATACAAACCTATTATGAAATATTCCAATTAGAAACATCAAAATAACAAGTTAAGAAGCAAATAATTTACATAAATATAACAAAACCCAGAAATATTTACGGCTTGTGTAACAAAAAAAGAAAAGTTCATGATGCCGGTAATATATTTTCATAATTTCCAGATTTGACCTTGAATATTGTAGATGACTCGTCACTTGTATTTCTTCTTTTTCTTTCTTTGTGATTTCTTCTCTTTCAAATTTATTTCTTTCTATTTTTAAACAATTTATTCTTTTGTTTAAATCTCCTATTTCATCTTCATCATTTTCGTCAAGATTCTTTGAAGTTATTTCACGATTGTTTCAATATTCTTCTTCGTCATCCTTATATTCAAGAATATCAAGATCGTTTGAATATCATTTTAAATGATCAACACGATCGTTTACCACTGTCAAGATGATGGTTTAATTTGAAATCTTTTTCTCATCGTTTAAAATAAACTACATGATCATTTACCATGTATCGGAGAAGTTGAGAGTTACACATTGAAAAAACCAAGAGGACTCATACTCCATATAATATAGATGGACTACTCCTCACATTGCCAATTGATTTTGAGATGGAACCCCATACGGGTATTCGATCCAATATAGGTGAACCCAAAAAGACACCATCTTGAGGGGGCATATCGGAGAAGTTGAGAGTCTCATATTGGAAAAACCAAAGGGAGTCATACTCCATATAATATATATGAGCTACTCCTCACATTGCTAATTGGTTTTGAGATGGAACCCCATAATATCAAATTTAACACTACGATCAACACTATCGTTTAAATTTGATGCTTTTTTCCATCGTTTACCATAGTCAACACAGTTGTTAGATTTGAAGTTTTTAACGATCATTTACGTTGGACTGCACGTTCGTTTGATCGTTTAAATTTAAAGCATTTTTCTCCATTATTAATAAGAAATACATGATCGTGTATCATGACCTAAATGATTATAGGTCATTTGTTTAGACTTTAGTATACGATCGTTTAGAATAAGATTACTCGTTCGCGTGTGTGGCCGATTAATCGCATGTTGATTGGGGTATTTTCTGTTTCTCATTGTGAGCTTGTGGGCTTTTTGGTTTTCAAAATTGTTCTATGTAGTGTAAATACCGATTTGTTACATTTTAAAAAGAAACCCTTAAGAACCATATAATTCATGAACATGAAAAATATGATAATTGATACCATACTGTCTGGCCACCAAAGCATGAAAAAAGAAAAGAAGAAAGATAAAATGAAACTGACAACGAGTTTGGGTGGTGAGAAACAGGGGAGCACGAACACAACACTCGACACGTAGGTGGAGAAGAGAAATGCATAAAAACAAAATGGTTGAAAAGATAAAATTAAGAAGAAAAAAATAACCCGTCTTCTTTGTTTTTTTGTTTTTCCAGTCATGTCTCATCCGTGTCTTGGTGTGTTGGCACCATGTTGGAAATTAGAAGAAAATAATAAAATAATCCGAAACAGTCTATTCATACCTTTACAGTTGATTCTATTGGGTGTGTCTAACCTTCCCTTCCCCCCAAGCCCGATTGTTTTCCCTAACATCTGCTTCTAACTTAGCCTCATAAACAAAGTCTGCTACCTGGGCCCGGATCTGCTTCTTGTTTGACTTGCCATGATAACAAACTAAGAAAGCAGTTAAGCAAGGTTGTGGCATGATTGAACAAGACCTCTGCAAACAATGGCTGTAGGTCATACAAGATAGAGGTATATAAGCCAATGAGAGGTTATTGCGTGGAGCAGCACCAGAGGATGGGTTGGTTCGTTCCTTTCTATGAAAAGAACCAGGAAAACCATTCAATAAAGAGATTCCCACTAATCAATGGAGGGCGGATTTGAGCTTTGGGTTCATTCTCATGAACTAGAGAAAAACATGGTTGCCACGCATAAGCAAGCTGCTGTTCTGTCATTCTCAAGGCTAGGCTATGGCTAGGTAGGGTTGACATGCCAACTGGTGTGTTGAAGTGTGTCAGTGTTGGAAATGTGTCTGACACTGACACTTGGCCATCTTAGGTGTGTCGGTGCTTCTTAGCTTGTAAGAGATGCTAAGTTGATATTGGCTAGATATCAACTACAATTGGTTGGCCTAGAGGTTGAGGGGAAAGTTGAAAAAGGTAAAATGATTATGGAGCCATAAGTTCAAATCTTGTGGTGGTCACGTACTGGAGAGTGGAGACATTAATATCCTTAGTCTATTTTTTCTCTTTTTACAATCAAACCAAAATTTTAAGCTTCATATTGTCTCAACATTAACGTGTGTCACTAACAATACACACAAGTGCACACTTATTATTAGTTGGATACCTTTGGGGTTTAAGAAATCGACAATCAAAGAAACCTAGTAAACGTAAACCATAGAGAAAACAACATTGAGATTTACTTGGTTTGCTAATGATATGTTAGCTACGTTCATAGGCAAACAGGGAGAAACATTTTATTAATAGAGAAAATATCAAATATTACAGGTTCAAGGCGCCAGGGAGACCCCTTGCTTAGTTGTTTGGAGTGCCAAATAACCGATTTGCTTCATTCCAATATGTTAGAACTTTCTCATGCAATAGAGTTGAACTTTCTTATGACCATCTTGTAATTGATATTTAAGATGCCTTGACATTTCAATTCGATATATAAGATGTTACTTACATTTGACTAGTAATAAAACATTTACAAACTCAAACATTTCAAATATACTATATTTTTGTTGACCTGAAAATTGACCCATAATTGTATCTTTGTATTTGTAGCTTAAAGCATCAGAGACTGGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGGTACGTTTCTGCACTTAATCAACTGGTTTTAACATAAACTTGAATGAAGGAATCAGAGTTGTGAAAACTCTAGAAGGACCAATGAATTGGATCATTGGACATGTTCCAAGTTTCTAATGATAAACAGTTCTCAATCATGATTTTTGGTGTGCATAATTCATAATACATTGTTATATTTGGTTGACAGTTATCATAGTTTGTATTGTTTGGTTGACATGTCCTATATCCTGTTCATTTTTCATAATAACAAATTTTGATTTCTTTTTACAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACCAAGGTCTGTATGCATATAATTTCTGAGGAACTATGGATCGTAGATGCATCTAACCATTTACTGGAAATATAGGAAGATATAGAAAAGGAACTGTTGAAGGTCCCGAAGGCAAGAAGATTTGGAACTTCTCAACATATTATGGTATGATTTGTATATTTTTTCTTTGTATATTTGATGTTCCTTTCTTGTGAAAAAGATTATCTGTTCTGTTAGTCCACGATTATATTGACTTAAACATTCAACAGGTTGGAAGTTTGGAAGATGTTCTAAAGAAAATGGAGGTGAGGTTTCTTGATCTCAAGTAGTAGTATCTTTTAGAATATAGAAATTTTACTCCATCTTAGTTTTCTTGATCAATTGCAGTTGAATGAAAATAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCCCAACACTTTCAAGAAGTGGGCAAAGCATGACAGAGGCCTGTGAATTCAGCCAACAGACTAAAACAAGAAGAATGAAAGAGCATGGATAGAACTGATTCAGCAAACTGAGGTTAGAAAAAACTGGAATTCTGTTATAGTTGGCTTCATGGGAGAGGAATAATGAAAACTAATGGCCTTTTTCTCCCTCATTAGACATCACAACGGATCTGATTCAGACATTATTTTGTGAGGTTGAAGAAGATAATGCCTTCTGTTTTACGTCAAGGAGGTTAGTGAAAACATTGCGGCTGGATTTCTCAGATGTGTTGAGTTTGATTTTATTTATGTATAGTATAGTCTTTATGATTGACGCCGTTTTCAACTGTAGATTAGAATCAATGTAATTTTAGCTTCTGAAATGGTTACTGATTCCTAAGGCGACTTGTCCCATTTTGCTCAGCCGTGCGTTGCCTAAGTACTAAAGGGCCGTTATTTACGTGGGAAGGGAATCTGACAGTATTTGATTTTCACAATAAATTAATGAACCATCAAATATCTTTTTTTTTTTTTTTTTTTTTTGAAGTTCACAATTTTACAGGTTGAGATCAGAACTTTTGACTTTAAAATGATGATTGATTATTTCATCCATCGAACTACGTTTGGATACATACACTATCTTATTGTCTATTGAGGAACGCTGTTGTTTACCGGTTAGATTTTTGGAAATGGAGAATTGTGTAGGTGGGGGAGAACGTATTAGGTTGTTAGATCTTATTTTCATTTGTATAAATATACTCCTTAATTATATGCGTAATTCAAATCTGTTGGTATTTCTTTTTCAAGAAAGAAGAA

mRNA sequence

ATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTCATATCCGTTTCTTCTTTCATCCACCATCACTGTACCAAACTTGGAGCCGAGCTTTCCAATCGTCTCGAAGACACCAAACGCTTCGCCGGAACTCTCGCCAGAAGATGGCCGGCCCAGGCGAATTGGCGATCATTTCCTACACCTGCTTTCGCATCCCTTGCGCGCCACACGCATGCCTTGGCTGCCACTCTTAGCCCCGACCAAGTGGCGAAGTCCCTCGTCGGCACGGCGGTATACACTGTTAGCAATTCAAATAATGAGTTTGTGCTCATTTCTGATCCCAATGGTGCCAAGTCAATTGGGTTGCTGTGCTTTCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCCAAGGTTGTACCTATTACCCTTGACCAGGTATATTTGTTGAAAGTTGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTATTCAGCTTAAGAATGCGTTAGAGCTTAAAGCATCAGAGACTGGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACCAAGGAAGATATAGAAAAGGAACTGTTGAAGGTCCCGAAGGCAAGAAGATTTGGAACTTCTCAACATATTATGGTTGGAAGTTTGGAAGATGTTCTAAAGAAAATGGAGTTGAATGAAAATAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCCCAACACTTTCAAGAAGTGGGCAAAGCATGA

Coding sequence (CDS)

ATGGAGATCCCAAAACCCTACCCGCATTCGAATCCTCTCATATCCGTTTCTTCTTTCATCCACCATCACTGTACCAAACTTGGAGCCGAGCTTTCCAATCGTCTCGAAGACACCAAACGCTTCGCCGGAACTCTCGCCAGAAGATGGCCGGCCCAGGCGAATTGGCGATCATTTCCTACACCTGCTTTCGCATCCCTTGCGCGCCACACGCATGCCTTGGCTGCCACTCTTAGCCCCGACCAAGTGGCGAAGTCCCTCGTCGGCACGGCGGTATACACTGTTAGCAATTCAAATAATGAGTTTGTGCTCATTTCTGATCCCAATGGTGCCAAGTCAATTGGGTTGCTGTGCTTTCGCAAGGAAGATGCCGAGACCTTTTTGGCTCAGGTCCGATCGAGGAAAAGAGAACTAAGAAGTAATGCCAAGGTTGTACCTATTACCCTTGACCAGGTATATTTGTTGAAAGTTGAAGGTATTGCATTCCGCTTTTTGCCAGATCCTATTCAGCTTAAGAATGCGTTAGAGCTTAAAGCATCAGAGACTGGAAGCAGTTTTGATGGAGTTCCTGTTTTTCAGTCTGACCTTCTGATCGTGAAAAAGAAAAACAAGCGTTATTGTCCTATATACTTTACCAAGGAAGATATAGAAAAGGAACTGTTGAAGGTCCCGAAGGCAAGAAGATTTGGAACTTCTCAACATATTATGGTTGGAAGTTTGGAAGATGTTCTAAAGAAAATGGAGTTGAATGAAAATAATTCAGCCTGGGAAGATCTGATTTTCATTCCACCTGGCAAAAGCCACTCCCAACACTTTCAAGAAGTGGGCAAAGCATGA

Protein sequence

MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPTPAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLEDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA*

Homology

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BLAST of CsaV3_4G034280 vs. NCBI nr
Match: XP_004141252.1 (protein TIC 22, chloroplastic isoform X1 [Cucumis sativus] >KGN55188.1 hypothetical protein Csa_012393 [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 1.2e-154
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE 240
           TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE 240

Query: 241 DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA
Sbjct: 241 DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 277

[Close]

BLAST of CsaV3_4G034280 vs. NCBI nr
Match: XP_008452540.1 (PREDICTED: protein TIC 22, chloroplastic [Cucumis melo] >KAA0064379.1 protein TIC 22 [Cucumis melo var. makuwa] >TYK20208.1 protein TIC 22 [Cucumis melo var. makuwa])

HSP 1 Score: 529.6 bits (1363), Expect = 1.6e-146
Identity = 266/278 (95.68%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPY HSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPA+ANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLARHTHALAATLS DQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVYLLKVEGIAFRFLPDPIQ+KNALELKA E
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKA-RRFGTSQHIMVGSL 240
           TGSSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKV KA RR GTSQHIMVGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. NCBI nr
Match: XP_038899812.1 (protein TIC 22, chloroplastic [Benincasa hispida])

HSP 1 Score: 521.5 bits (1342), Expect = 4.3e-144
Identity = 261/278 (93.88%), Postives = 268/278 (96.40%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPYPHSNPL+SVSSFI HHCT+LGAELSNRLEDTKRFAGTLARRWPA+ANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLLSVSSFIRHHCTRLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLA+HTHALAATLS DQVAKSLVGTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLAQHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQVY+LKVEGIAFRFLPDPIQ+KNALELKAS+
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPIQIKNALELKASD 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKV KA R  GTSQHIMVGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. NCBI nr
Match: XP_022937273.1 (protein TIC 22, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 500.7 bits (1288), Expect = 7.9e-138
Identity = 248/278 (89.21%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           ME PKPYP SN L+SVSSFIHHHCT+ GAELSNRLE+TKRFAGT A+RWPA+ANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLA+HT+ALAATLS DQ+AKSL+GTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQVY+LKVEGIAFRFLPDP+Q+KNALELKAS+
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKV KA R  GTSQHIMVGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH +EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. NCBI nr
Match: XP_022142577.1 (protein TIC 22, chloroplastic [Momordica charantia])

HSP 1 Score: 500.4 bits (1287), Expect = 1.0e-137
Identity = 247/278 (88.85%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           ME PKPYPH+NPL+S+SSFIH+HC +LGAE SNRLEDTKRFAGTLARRWPA+ANWR  PT
Sbjct: 1   METPKPYPHANPLLSISSFIHNHCIRLGAEFSNRLEDTKRFAGTLARRWPAEANWRFLPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASL +HT+ALAATLS DQVAKSLVGTAVYTVSNSNNEFVL+SDPNG KSIGLLCFRK
Sbjct: 61  PAFASLTQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLVSDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQ RSRKRELRSNAKVVPITLDQVY+LKVEGIAFRFLPDP+Q+KNALELKAS+
Sbjct: 121 EDAETFLAQARSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKKKNKRYCPIYF KEDIE+ELLKV KA R  GTSQHIMVGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFAKEDIERELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy Swiss-Prot
Match: Q9SZB2 (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 3.8e-95
Identity = 179/268 (66.79%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 11  NPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT-PAFASLARH 70
           NP +S SSFIHH CT+  ++LS R+EDTKRFA TLA R        S PT P FAS+++ 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLA 130
                  TLSP  VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFDGV 190
           Q R R+REL++NAKVVPITLDQVYLLKVEGI+FRFLPDPIQ+KNALELK+S   + FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLEDVLKKMEL 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K  +A R    Q IMVGSLEDVL+KME+
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASR--GDQQIMVGSLEDVLRKMEM 247

Query: 251 NENNSAWEDLIFIPPGKSHSQHFQEVGK 277
           +E NS WED+IFIPPG+S++QH Q++ K
Sbjct: 248 SEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy Swiss-Prot
Match: Q9ZST9 (Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 9.5e-94
Identity = 181/265 (68.30%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 11  NPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPTPAFASLARHT 70
           NPL+S S FI+HH       L+ RLE+TKR AGTL      Q++ R+ P           
Sbjct: 8   NPLLSFSRFINHHSN----HLATRLEETKRLAGTL-----IQSHTRTKP----------- 67

Query: 71  HALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLAQV 130
            A AATL+P+ VAKSL GT+VYTVSNS+NEFVL+SD  GAKSIGLLCFR+EDAE FLAQV
Sbjct: 68  -AFAATLTPNHVAKSLAGTSVYTVSNSDNEFVLMSDAEGAKSIGLLCFRQEDAEAFLAQV 127

Query: 131 RSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFDGVPV 190
           RSRK+E R  AKVVPITLDQVY+LKVEGIAFRFLPDP+Q+KNALEL+A+  G SFDGVPV
Sbjct: 128 RSRKKEFRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAANRG-SFDGVPV 187

Query: 191 FQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSLEDVLKKMELN 250
           FQSDLL+VKKKNKRYCP+YF+KED+E EL KV ++ +  G SQHIMVGS EDVLKKMEL+
Sbjct: 188 FQSDLLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQHIMVGSFEDVLKKMELS 247

Query: 251 ENNSAWEDLIFIPPGKSHSQHFQEV 275
           E +S WEDL+FIPPGK HSQH QEV
Sbjct: 248 EKSSGWEDLVFIPPGKKHSQHMQEV 250

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy Swiss-Prot
Match: F4J469 (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-35
Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 77  LSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELK--ASETGSSFDGVPVFQS 196
           +R   +KVV + L +V+ LKV G+AFR +P+  Q+KNAL+ +  A      F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKV-PKARRFGTS---QHIMVGSLEDVLKKMELN 256
             LI++ +N  Y P++F KED+EK L++   +  R   +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

Query: 257 ENNSAWEDLIFIPPG 265
              S W+D++FIPPG
Sbjct: 290 STTSNWDDIVFIPPG 303

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL
Match: A0A0A0L097 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639760 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 5.9e-155
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT
Sbjct: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE
Sbjct: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE 240
           TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLE 240

Query: 241 DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA
Sbjct: 241 DVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 277

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL
Match: A0A5D3D9N1 (Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003450 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.7e-147
Identity = 266/278 (95.68%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPY HSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPA+ANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLARHTHALAATLS DQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVYLLKVEGIAFRFLPDPIQ+KNALELKA E
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKA-RRFGTSQHIMVGSL 240
           TGSSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKV KA RR GTSQHIMVGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL
Match: A0A1S3BV89 (protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.7e-147
Identity = 266/278 (95.68%), Postives = 270/278 (97.12%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           MEIPKPY HSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPA+ANWRSFPT
Sbjct: 1   MEIPKPYTHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLARHTHALAATLS DQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK
Sbjct: 61  PAFASLARHTHALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRKREL+SNAKVVPITLDQVYLLKVEGIAFRFLPDPIQ+KNALELKA E
Sbjct: 121 EDAETFLAQVRSRKRELKSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQIKNALELKAPE 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKA-RRFGTSQHIMVGSL 240
           TGSSFDGVPVFQSDLLIVKK+NKRYCPIYFTKEDIEKELLKV KA RR GTSQHIMVGSL
Sbjct: 181 TGSSFDGVPVFQSDLLIVKKRNKRYCPIYFTKEDIEKELLKVSKASRRLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL
Match: A0A6J1FFN8 (protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.8e-138
Identity = 248/278 (89.21%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           ME PKPYP SN L+SVSSFIHHHCT+ GAELSNRLE+TKRFAGT A+RWPA+ANWRSFPT
Sbjct: 1   METPKPYPQSNLLLSVSSFIHHHCTRFGAELSNRLEETKRFAGTFAKRWPAEANWRSFPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASLA+HT+ALAATLS DQ+AKSL+GTAVYTVSNSNNEFVLISDPNG KSIGLLCFRK
Sbjct: 61  PAFASLAQHTNALAATLSSDQLAKSLIGTAVYTVSNSNNEFVLISDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQVRSRK+ELRSNAKVVPI LDQVY+LKVEGIAFRFLPDP+Q+KNALELKAS+
Sbjct: 121 EDAETFLAQVRSRKKELRSNAKVVPINLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKV KA R  GTSQHIMVGSL
Sbjct: 181 TQSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH +EVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIKEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL
Match: A0A6J1CN57 (protein TIC 22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012654 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 5.0e-138
Identity = 247/278 (88.85%), Postives = 261/278 (93.88%), Query Frame = 0


Query: 1   MEIPKPYPHSNPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT 60
           ME PKPYPH+NPL+S+SSFIH+HC +LGAE SNRLEDTKRFAGTLARRWPA+ANWR  PT
Sbjct: 1   METPKPYPHANPLLSISSFIHNHCIRLGAEFSNRLEDTKRFAGTLARRWPAEANWRFLPT 60

Query: 61  PAFASLARHTHALAATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRK 120
           PAFASL +HT+ALAATLS DQVAKSLVGTAVYTVSNSNNEFVL+SDPNG KSIGLLCFRK
Sbjct: 61  PAFASLTQHTNALAATLSSDQVAKSLVGTAVYTVSNSNNEFVLVSDPNGVKSIGLLCFRK 120

Query: 121 EDAETFLAQVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASE 180
           EDAETFLAQ RSRKRELRSNAKVVPITLDQVY+LKVEGIAFRFLPDP+Q+KNALELKAS+
Sbjct: 121 EDAETFLAQARSRKRELRSNAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKASD 180

Query: 181 TGSSFDGVPVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARR-FGTSQHIMVGSL 240
           T SSFDGVPVFQSDLLIVKKKNKRYCPIYF KEDIE+ELLKV KA R  GTSQHIMVGSL
Sbjct: 181 TRSSFDGVPVFQSDLLIVKKKNKRYCPIYFAKEDIERELLKVSKASRGLGTSQHIMVGSL 240

Query: 241 EDVLKKMELNENNSAWEDLIFIPPGKSHSQHFQEVGKA 278
           EDVLKKMELNE NSAWEDLIFIPPGKSHSQH QEVGKA
Sbjct: 241 EDVLKKMELNEKNSAWEDLIFIPPGKSHSQHIQEVGKA 278

[Close]

BLAST of CsaV3_4G034280 vs. TAIR 10
Match: AT4G33350.1 (Tic22-like family protein )

HSP 1 Score: 349.4 bits (895), Expect = 2.7e-96
Identity = 179/268 (66.79%), Postives = 216/268 (80.60%), Query Frame = 0


Query: 11  NPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT-PAFASLARH 70
           NP +S SSFIHH CT+  ++LS R+EDTKRFA TLA R        S PT P FAS+++ 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLA 130
                  TLSP  VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFDGV 190
           Q R R+REL++NAKVVPITLDQVYLLKVEGI+FRFLPDPIQ+KNALELK+S   + FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLEDVLKKMEL 250
           PVFQS+LL+V+KKN+RYCP+YF+KEDIE+EL K  +A R    Q IMVGSLEDVL+KME+
Sbjct: 188 PVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASR--GDQQIMVGSLEDVLRKMEM 247

Query: 251 NENNSAWEDLIFIPPGKSHSQHFQEVGK 277
           +E NS WED+IFIPPG+S++QH Q++ K
Sbjct: 248 SEKNSGWEDVIFIPPGRSYAQHMQDLIK 267

[Close]

BLAST of CsaV3_4G034280 vs. TAIR 10
Match: AT4G33350.2 (Tic22-like family protein )

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-84
Identity = 164/268 (61.19%), Postives = 197/268 (73.51%), Query Frame = 0


Query: 11  NPLISVSSFIHHHCTKLGAELSNRLEDTKRFAGTLARRWPAQANWRSFPT-PAFASLARH 70
           NP +S SSFIHH CT+  ++LS R+EDTKRFA TLA R        S PT P FAS+++ 
Sbjct: 8   NPFLSFSSFIHHQCTRFSSDLSARIEDTKRFAETLATR------RFSLPTPPPFASVSQS 67

Query: 71  THAL-AATLSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLA 130
                  TLSP  VAK+L GT+V+TVSN+NNEFVLISDP G KSIGLLCFR+EDAE FLA
Sbjct: 68  KSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGGKSIGLLCFRQEDAEAFLA 127

Query: 131 QVRSRKRELRSNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELKASETGSSFDGV 190
           Q R R+REL++NAKVVPITLDQVYLLKVEGI+FRFLPDPIQ+KNALELK+S   + FDGV
Sbjct: 128 QARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGNKNGFDGV 187

Query: 191 PVFQSDLLIVKKKNKRYCPIYFTKEDIEKELLKVPKARRFGTSQHIMVGSLEDVLKKMEL 250
           PVFQS+LL+V+KKN+RYCP                            VGSLEDVL+KME+
Sbjct: 188 PVFQSELLVVRKKNRRYCP----------------------------VGSLEDVLRKMEM 241

Query: 251 NENNSAWEDLIFIPPGKSHSQHFQEVGK 277
           +E NS WED+IFIPPG+S++QH Q++ K
Sbjct: 248 SEKNSGWEDVIFIPPGRSYAQHMQDLIK 241

[Close]

BLAST of CsaV3_4G034280 vs. TAIR 10
Match: AT3G23710.1 (Tic22-like family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-36
Identity = 83/195 (42.56%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 77  LSPDQVAKSLVGTAVYTVSNSNNEFVLISDPNGAKSIGLLCFRKEDAETFLAQVRSRKRE 136
           LS D + + L G  VY +SNSN EFVL+S  +  KS+GLL  ++EDAET L +++S    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSGKSLGLLFCKEEDAETLLKEMKSMDPR 169

Query: 137 LR-SNAKVVPITLDQVYLLKVEGIAFRFLPDPIQLKNALELK--ASETGSSFDGVPVFQS 196
           +R   +KVV + L +V+ LKV G+AFR +P+  Q+KNAL+ +  A      F GVPVFQS
Sbjct: 170 MRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQS 229

Query: 197 DLLIVKKKNKRYCPIYFTKEDIEKELLKV-PKARRFGTS---QHIMVGSLEDVLKKMELN 256
             LI++ +N  Y P++F KED+EK L++   +  R   +     I V   ED++K M   
Sbjct: 230 KSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR-E 289

Query: 257 ENNSAWEDLIFIPPG 265
              S W+D++FIPPG
Sbjct: 290 STTSNWDDIVFIPPG 303

The following BLAST results are available for this feature:

BLAST of CsaV3_4G034280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141252.1	1.2e-154	100.00	protein TIC 22, chloroplastic isoform X1 [Cucumis sativus] >KGN55188.1 hypotheti...	[more]
XP_008452540.1	1.6e-146	95.68	PREDICTED: protein TIC 22, chloroplastic [Cucumis melo] >KAA0064379.1 protein TI...	[more]
XP_038899812.1	4.3e-144	93.88	protein TIC 22, chloroplastic [Benincasa hispida]	[more]
XP_022937273.1	7.9e-138	89.21	protein TIC 22, chloroplastic-like [Cucurbita moschata]	[more]
XP_022142577.1	1.0e-137	88.85	protein TIC 22, chloroplastic [Momordica charantia]	[more]

BLAST of CsaV3_4G034280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZB2	3.8e-95	66.79	Protein TIC 22, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22 PE=1 SV=1	[more]
Q9ZST9	9.5e-94	68.30	Protein TIC 22, chloroplastic OS=Pisum sativum OX=3888 GN=TIC22 PE=1 SV=1	[more]
F4J469	2.0e-35	42.56	Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC22L PE=...	[more]

BLAST of CsaV3_4G034280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L097	5.9e-155	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G639760 PE=4 SV=1	[more]
A0A5D3D9N1	7.7e-147	95.68	Protein TIC 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00345...	[more]
A0A1S3BV89	7.7e-147	95.68	protein TIC 22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493535 PE=4 SV=1	[more]
A0A6J1FFN8	3.8e-138	89.21	protein TIC 22, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111443609...	[more]
A0A6J1CN57	5.0e-138	88.85	protein TIC 22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012654 PE=...	[more]

BLAST of CsaV3_4G034280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33350.1	2.7e-96	66.79	Tic22-like family protein	[more]
AT4G33350.2	1.8e-84	61.19	Tic22-like family protein	[more]
AT3G23710.1	1.4e-36	42.56	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1350.100		coord: 165..261 e-value: 1.2E-15 score: 59.9
None	No IPR available	GENE3D	3.40.1350.100		coord: 90..265 e-value: 1.2E-15 score: 59.9
None	No IPR available	PANTHER	PTHR33926:SF4	PROTEIN TIC 22, CHLOROPLASTIC	coord: 8..274
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 13..273 e-value: 1.2E-103 score: 345.6
IPR007378	Tic22-like	PANTHER	PTHR33926	PROTEIN TIC 22, CHLOROPLASTIC	coord: 8..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G034280.1	CsaV3_4G034280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport