CsaV3_4G034030 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G034030
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 24101568 .. 24102629 (+)
RNA-Seq ExpressionCsaV3_4G034030
SyntenyCsaV3_4G034030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTCCAGTTCACAAATGAAGAACGCAAAGCTGGCTCCACAAAACCGAATGATTCCCTCATGGTGGTTGGTATCAAGGAGCTTGGAGCCCATCAGTCACTGTCCAATGCATGACTATCTTGATGGCCTATTAGTCAATCCCCTCACGGTGTCAAGGTTCTTGATCATATTTTAATTATTGGGAGATTTCATTTCTAACTGTTTCATGCTTGTCATTTCTTTTCAAGTTACACATTTTGGATGTTACCAAACATGCTCTTGCATCTACTTCTACACTCTCTTGATTGGATTGGAAAATTTAGAGACATGAATATAATGGGCTTCTGTTGCATATTGCAGGGACTGGCTTTTATAAGTCGTTTTAATATGGCCGGCTGTCAGTGGAGCTAGTGGCTCTCTGAGTAGAGTTCATTTAACACACTTCAGTTGTCAAGTGCAACCCGCCAATGAAATAGAGAAGGCTGCTGTGTGTTCTTGCTGTCAAATCTATGGAGGCCTTACTATTTTTGGCGTATGGCGATGCCTGCAATATTTGGAAGGAACTTGGTCGTGGCCGTGTACTGAATACTGAATTTATGTCTAGGTACAAATATTGGGAGCTTCGCTGTATTTCGATCTGTAACATCTTTGCCCTTCTGTTCAGATTGAAATAATAAAAGCGTCAACAAAAAATTGAGGTTGATGAGCATGCAGGACAAGCAATCTACGTCCACAATTGAGGTTTGCACGAATTTAAAAATCGCAATTTTTTTTTAAAACAAAGCTAGAGGGTACTTTGTTTTTAGATCTTGTGATTTGTGTTGTATTTGATTGAAAATAAAAGAACATAAATATGAGATGGTTCAAATTAGCTGATTCTCGGGTCAATATAATTTTAAAGAACTGATAATTGCAAGTATATCAATCACATCCAAACTATTTGTAGATATCGCACAATGTACAAAAAGTTTATCAATAATAGAATATGAGTAATGGATTATGCTAAATTTGTAATTGTATTGAATGCAATTAACTCAAAACCTATTTATGCAATTTCTTCCTTTTGAAGAGTTGGATTTCTTG

mRNA sequence

TTTTCCAGTTCACAAATGAAGAACGCAAAGCTGGCTCCACAAAACCGAATGATTCCCTCATGGTGGTTGGTATCAAGGAGCTTGGAGCCCATCAGTCACTGTCCAATGCATGACTATCTTGATGGCCTATTAGTCAATCCCCTCACGGTGTCAAGGTTCTTGATCATATTTTAA

Coding sequence (CDS)

TTTTCCAGTTCACAAATGAAGAACGCAAAGCTGGCTCCACAAAACCGAATGATTCCCTCATGGTGGTTGGTATCAAGGAGCTTGGAGCCCATCAGTCACTGTCCAATGCATGACTATCTTGATGGCCTATTAGTCAATCCCCTCACGGTGTCAAGGTTCTTGATCATATTTTAA

Protein sequence

FSSSQMKNAKLAPQNRMIPSWWLVSRSLEPISHCPMHDYLDGLLVNPLTVSRFLIIF*
Homology
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BLAST of CsaV3_4G034030 vs. NCBI nr
Match: KAE8649853.1 (hypothetical protein Csa_012824, partial [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  FSSSQMKNAKLAPQNRMIPSWWLVSRSLEPISHCPMHDYLDGLLVNPLTVSRFLIIF 58
          FSSSQMKNAKLAPQNRMIPSWWLVSRSLEPISHCPMHDYLDGLLVNPLTVSRFLIIF
Sbjct: 1  FSSSQMKNAKLAPQNRMIPSWWLVSRSLEPISHCPMHDYLDGLLVNPLTVSRFLIIF 57

The following BLAST results are available for this feature:
BLAST of CsaV3_4G034030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649853.11.6e-24100.00hypothetical protein Csa_012824, partial [Cucumis sativus][more]
BLAST of CsaV3_4G034030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G034030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G034030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G034030.1CsaV3_4G034030.1mRNA