CsaV3_4G031860 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G031860
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Auxin-responsive family protein
Location	chr4: 22432421 .. 22433138 (+)
RNA-Seq Expression	CsaV3_4G031860
Synteny	CsaV3_4G031860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAACCCCCCCATCTCTCTTTTCTCTCTCTCTTTTTTCCTCAATTTCAGATTCTCCTTCAAGTCTCCTATATAAATCTCTCTCAAATCAAATCAAGAAAAGAAAACTTAAAAAGTAAATAATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAGGATTTCATGTATGGAAATTCAATGGAAAAAGTTGTTATGTATCCGAGTTTCCTTCCCAAACTTTTTTGTTTTGAAAAGATAGTGAGTATTCGAAATTGTGTATTTACTGTGTAATTTTTTATTTTGTATTTATGCATAAAGAGG

mRNA sequence

ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAG

Coding sequence (CDS)

ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTATGTTTTTTAG

Protein sequence

MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF*

Homology

[Close]

BLAST of CsaV3_4G031860 vs. NCBI nr
Match: XP_011653970.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical protein Csa_012026 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60

Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL
Sbjct: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120

Query: 121 FDHLLWMLENSDPNITFDSNLEELAELYVF 151
           FDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 FDHLLWMLENSDPNITFDSNLEELAELYVF 150

[Close]

BLAST of CsaV3_4G031860 vs. NCBI nr
Match: XP_008444291.1 (PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNV 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG +NV
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQFDQKVSGNNNV 60

Query: 61  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHE--DDEECILVRCE 120
           +LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD DD+ + H+  DDE+CILVRCE
Sbjct: 61  VLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDEDCILVRCE 120

Query: 121 VVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           VVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 VVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of CsaV3_4G031860 vs. NCBI nr
Match: XP_038899559.1 (auxin-responsive protein SAUR78 [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57
Identity = 126/154 (81.82%), Postives = 139/154 (90.26%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQIEQ--KVSG 60
           MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC  + +EEDFEQQ +Q  KVSG
Sbjct: 1   MKKINYLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCGTKMEEEDFEQQKQQLEKVSG 60

Query: 61  SNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRC 120
           ++VILYVGSTRK+YAI+SKYLSHPLLNALIDKSKSKKL+ +DDD      ++E+CI VRC
Sbjct: 61  NDVILYVGSTRKRYAISSKYLSHPLLNALIDKSKSKKLLANDDD------EEEDCISVRC 120

Query: 121 EVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           EVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Sbjct: 121 EVVLFDHLLWMLENSDPNISFDSNLEELAELYVF 148

[Close]

BLAST of CsaV3_4G031860 vs. NCBI nr
Match: XP_023536060.1 (auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.0 bits (554), Expect = 5.5e-53
Identity = 119/160 (74.38%), Postives = 131/160 (81.88%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE--------- 60
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC++  E+ E++ E         
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCDRTMEEHEEREEHEEREEHEG 60

Query: 61  -QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEE 120
            +KVSGSNVI+YVGSTRK+YAI+SKYLSHPLLNALIDKSK  K  ++DDDD        E
Sbjct: 61  FEKVSGSNVIIYVGSTRKRYAISSKYLSHPLLNALIDKSKPPKGNNEDDDD--------E 120

Query: 121 CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           CI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Sbjct: 121 CISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF 152

[Close]

BLAST of CsaV3_4G031860 vs. NCBI nr
Match: KAG7024703.1 (hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52
Identity = 118/163 (72.39%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE--------- 60
           M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+  E+ E+  E         
Sbjct: 1   MMKMNSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCERTMEEHEEHEEREEHGEHEE 60

Query: 61  ----QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHED 120
               ++VSGSNVI+YVGSTRK+Y I+SKYLSHPLLNALIDKSK  K  +DDD       D
Sbjct: 61  REGFEEVSGSNVIIYVGSTRKRYTISSKYLSHPLLNALIDKSKPPKGNEDDD-------D 120

Query: 121 DEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           D +CI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Sbjct: 121 DHKCISVRCEVVLFDHLLWMLENSDPNICFDSNLEELAELYVF 156

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 60  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVV 119
           ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++          D+E +LV CEVV
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLD--RSSRFIEE--------RHDQETVLVACEVV 105

Query: 120 LFDHLLWMLENS-----DPNITFDSNLEELAELYVF 151
           LF+HLLWML+NS     D +     ++EELAE Y +
Sbjct: 106 LFEHLLWMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 60  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVV 119
           ++YVG TR+ Y +    +SHPL   L+D+S S+ +           E D E I+V CEVV
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSI-----------EQDRE-IVVACEVV 104

Query: 120 LFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           LF+HLLWML++         ++EELAE Y +
Sbjct: 105 LFEHLLWMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           +YVG TR+ Y ++S  +SHPL   L         VD     +DG       I V CEVVL
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL-------AAVDGGCGSEDG------SISVSCEVVL 110

Query: 121 FDHLLWMLENSDPNITFDSNLEELAELY 149
           F+HLLWMLEN+D + +   ++ EL E Y
Sbjct: 111 FEHLLWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL
Match: A0A1S3B9J9 (uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.6e-67
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSG-SNV 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG +NV
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQFDQKVSGNNNV 60

Query: 61  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHE--DDEECILVRCE 120
           +LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD DD+ + H+  DDE+CILVRCE
Sbjct: 61  VLYVGSTRKKYAINSKYLGHPLLNALIDKSKSKKLVDDHDDEHEEHDDGDDEDCILVRCE 120

Query: 121 VVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           VVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 VVLFDHLLWMLENSDPNITFDSNLEELAELYVF 153

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL
Match: A0A6J1C0S4 (uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007398 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.6e-51
Identity = 117/158 (74.05%), Postives = 128/158 (81.01%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQ 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C       E++EED +QQ  +
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWNICGTKMEEEEEEEEDHQQQQLE 60

Query: 61  KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECI 120
           KV GSNVI+YVGSTRKKY I+SK+LSHPL+NALIDKSKSK              +D E I
Sbjct: 61  KVRGSNVIMYVGSTRKKYVISSKFLSHPLVNALIDKSKSK---------SKSKSEDCEAI 120

Query: 121 LVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF 151
            VRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Sbjct: 121 SVRCEVVLFDHLLWMLENSDPNITFDSNLEELADLYVF 149

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL
Match: B9RI47 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38
Identity = 95/150 (63.33%), Postives = 112/150 (74.67%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW   K+E++  Q            
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREELWGDHKEEDEEHQS----------T 60

Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           L+VGSTRK+Y I+SKYLSHPL+NALI KSK ++               EE ++V+CEVVL
Sbjct: 61  LFVGSTRKRYVISSKYLSHPLVNALIQKSKQRQ--------------GEEILVVKCEVVL 120

Query: 121 FDHLLWMLENSDPNITFDSNLEELAELYVF 151
           FDHLLWMLEN+DPN++FDS LEELAELYVF
Sbjct: 121 FDHLLWMLENADPNLSFDS-LEELAELYVF 125

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL
Match: A0A0A0L464 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G607030 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 96/150 (64.00%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60
           MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI
Sbjct: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60

Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           LYVG                                                     +VL
Sbjct: 61  LYVG-----------------------------------------------------IVL 97

Query: 121 FDHLLWMLENSDPNITFDSNLEELAELYVF 151
           FDHLLWMLENSDPNITFDSNLEELAELYVF
Sbjct: 121 FDHLLWMLENSDPNITFDSNLEELAELYVF 97

[Close]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL
Match: A0A2C9UHW2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G016100 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 94/151 (62.25%), Postives = 113/151 (74.83%), Query Frame = 0


Query: 1   MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVI 60
           MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W  +K  +D +++ E         
Sbjct: 1   MKKINLILRKCKSLSRQLGRSSSYSSLRSKSTREDVWGTDKLHQDEQEEHE--------T 60

Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           ++VGSTRK+Y INSKYLSHPL+NALI+KSK K                EE ++V+CEVVL
Sbjct: 61  IFVGSTRKRYVINSKYLSHPLVNALIEKSKQK--------------HGEEVLVVKCEVVL 120

Query: 121 FDHLLWMLENSDP-NITFDSNLEELAELYVF 151
           FDHLLWMLEN+DP N++ DS LEELA+LYVF
Sbjct: 121 FDHLLWMLENADPTNLSLDS-LEELADLYVF 128

[Close]

BLAST of CsaV3_4G031860 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 6.4e-23
Identity = 67/149 (44.97%), Postives = 95/149 (63.76%), Query Frame = 0


Query: 3   KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNV-IL 62
           ++  +LR+CKS+S QLGRS SY+SLRSKS R D        +D  Q ++Q  + S    +
Sbjct: 6   RLMMMLRRCKSVSTQLGRSYSYTSLRSKSARRD-------PQDHLQDVDQSPTPSMYQTV 65

Query: 63  YVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECIL-VRCEVVL 122
            VG T+K Y I+ K+L HPLLNAL++K +      ++DD++DG      CI+ V+CEVVL
Sbjct: 66  LVGRTKKPYLISKKHLKHPLLNALVEKQQRY----EEDDNEDG-----SCIITVKCEVVL 125

Query: 123 FDHLLWMLENSDPNITFDSNLEELAELYV 150
           FDHLLWMLE  D  +    +L++ A LY+
Sbjct: 126 FDHLLWMLEYGD-EVHILESLDDFAHLYL 137

[Close]

BLAST of CsaV3_4G031860 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 71.2 bits (173), Expect = 7.8e-13
Identity = 37/96 (38.54%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 60  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVV 119
           ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++          D+E +LV CEVV
Sbjct: 46  VVYVGKSRRPYMLSSHVIAHPLFQELLD--RSSRFIEE--------RHDQETVLVACEVV 105

Query: 120 LFDHLLWMLENS-----DPNITFDSNLEELAELYVF 151
           LF+HLLWML+NS     D +     ++EELAE Y +
Sbjct: 106 LFEHLLWMLKNSSSDHGDEDDRERGSVEELAEFYTY 131

[Close]

BLAST of CsaV3_4G031860 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 60  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVV 119
           ++YVG TR+ Y +    +SHPL   L+D+S S+ +           E D E I+V CEVV
Sbjct: 45  VVYVGQTRRPYMLRPDIISHPLFQELVDRSSSRSI-----------EQDRE-IVVACEVV 104

Query: 120 LFDHLLWMLENSDPNITFDSNLEELAELYVF 151
           LF+HLLWML++         ++EELAE Y +
Sbjct: 105 LFEHLLWMLKSGQEG----GSVEELAEFYTY 119

[Close]

BLAST of CsaV3_4G031860 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0


Query: 61  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDDGHEDDEECILVRCEVVL 120
           +YVG TR+ Y ++S  +SHPL   L         VD     +DG       I V CEVVL
Sbjct: 51  VYVGRTRRTYHVSSDVVSHPLFQQL-------AAVDGGCGSEDG------SISVSCEVVL 110

Query: 121 FDHLLWMLENSDPNITFDSNLEELAELY 149
           F+HLLWMLEN+D + +   ++ EL E Y
Sbjct: 111 FEHLLWMLENADADESRPESVYELVEFY 125

[Close]

BLAST of CsaV3_4G031860 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 41.2 bits (95), Expect = 8.6e-04
Identity = 26/101 (25.74%), Postives = 45/101 (44.55%), Query Frame = 0


Query: 43  EEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDD 102
           E D    +  K       +YVG  R K  + + YL+HPL   L+DKS  + L        
Sbjct: 43  EADEAAMMASKTPTGTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLC------- 102

Query: 103 DGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEE 144
               + +  ++V C + +F  ++  +E+ + N  F   +EE
Sbjct: 103 ---FEQKVMLVVPCSLSVFQDVVNAVESCNGNFDFGEFVEE 133

The following BLAST results are available for this feature:

BLAST of CsaV3_4G031860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653970.1	1.8e-75	100.00	auxin-responsive protein SAUR78 [Cucumis sativus] >KAE8649782.1 hypothetical pro...	[more]
XP_008444291.1	1.1e-66	90.20	PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]	[more]
XP_038899559.1	2.8e-57	81.82	auxin-responsive protein SAUR78 [Benincasa hispida]	[more]
XP_023536060.1	5.5e-53	74.38	auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]	[more]
KAG7024703.1	4.7e-52	72.39	hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CsaV3_4G031860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI6	1.1e-11	38.54	Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 S...	[more]
Q9C9E1	1.9e-11	40.66	Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 S...	[more]
Q29PU2	3.0e-09	42.05	Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 S...	[more]

BLAST of CsaV3_4G031860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9J9	5.6e-67	90.20	uncharacterized protein LOC103487659 OS=Cucumis melo OX=3656 GN=LOC103487659 PE=...	[more]
A0A6J1C0S4	5.6e-51	74.05	uncharacterized protein LOC111007398 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
B9RI47	1.1e-38	63.33	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1576420 PE=3 SV=1	[more]
A0A0A0L464	2.1e-37	64.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G607030 PE=4 SV=1	[more]
A0A2C9UHW2	2.1e-37	62.25	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G016100 PE=3 SV=...	[more]

BLAST of CsaV3_4G031860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12955.1	6.4e-23	44.97	SAUR-like auxin-responsive protein family	[more]
AT1G17345.1	7.8e-13	38.54	SAUR-like auxin-responsive protein family	[more]
AT1G72430.1	1.3e-12	40.66	SAUR-like auxin-responsive protein family	[more]
AT5G20820.1	2.1e-10	42.05	SAUR-like auxin-responsive protein family	[more]
AT2G36210.1	8.6e-04	25.74	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..128 e-value: 5.2E-11 score: 42.6
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 3..150
None	No IPR available	PANTHER	PTHR31374:SF195	EXPRESSED PROTEIN	coord: 3..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G031860.1	CsaV3_4G031860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin