CsaV3_4G031510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G031510
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 21977042 .. 21977206 (+)
RNA-Seq ExpressionCsaV3_4G031510
SyntenyCsaV3_4G031510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCTTCGTGAAATCTCTGTTTATTTGGGATTGGATTATTGTGAATTTGTTTGAAGAGGAGATCGTTAAAGCTAATGATTCTTGCGTGGTGGGGGATTTGGTCGTGTCATGTGCAATGGTTGGCGAAGAGGTGTTTTCGATCAAGCTTGTTGTTTCATTAGGAGA

mRNA sequence

ATTTGTTTGAAGAGGAGATCGTTAAAGCTAATGATTCTTGCGTGGTGGGGGATTTGGTCGTGTCATGTGCAATGGTTGGCGAAGAGGTGTTTTCGATCAAGCTTGTTGTTTCATTAG

Coding sequence (CDS)

ATTTGTTTGAAGAGGAGATCGTTAAAGCTAATGATTCTTGCGTGGTGGGGGATTTGGTCGTGTCATGTGCAATGGTTGGCGAAGAGGTGTTTTCGATCAAGCTTGTTGTTTCATTAG

Protein sequence

ICLKRRSLKLMILAWWGIWSCHVQWLAKRCFRSSLLFH*
Homology
[Close]
BLAST of CsaV3_4G031510 vs. NCBI nr
Match: KAE8649770.1 (hypothetical protein Csa_023762, partial [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-14
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  ICLKRRSLKLMILAWWGIWSCHVQWLAKRCFRSSLLFH 39
          ICLKRRSLKLMILAWWGIWSCHVQWLAKRCFRSSLLFH
Sbjct: 1  ICLKRRSLKLMILAWWGIWSCHVQWLAKRCFRSSLLFH 38

The following BLAST results are available for this feature:
BLAST of CsaV3_4G031510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649770.11.3e-14100.00hypothetical protein Csa_023762, partial [Cucumis sativus][more]
BLAST of CsaV3_4G031510 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031510 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G031510.1CsaV3_4G031510.1mRNA