CsaV3_4G030250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G030250
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 19966515 .. 19966830 (-)
RNA-Seq ExpressionCsaV3_4G030250
SyntenyCsaV3_4G030250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTGTTTGGGATTAGGAGCAGACCATGCAATTGGTCCTTTGGGCTTGCAATCTAACAATGACGCAGGCAATGGTGCCCTTGCACCCATTCCATTGGGATCAAAACTAATAAACTCGTCAGAAGTTGGAGGAAGGGAAATTGATGACGATGATTCAGGTACTTCAGCAATAGATTCTCTAAAATTACGAATGGTAGATTCTTCCAGAGTCGTTGGAGGTTGTGCTAAATCAAGCATGCCTCTAGTAGTTGCCATGATTTTGGATGGAGAAGACATGGCAATGAGGAAGAAGAATGTGAAGAAAACAACATCAT

mRNA sequence

ATGTTGTGTTTGGGATTAGGAGCAGACCATGCAATTGGTCCTTTGGGCTTGCAATCTAACAATGACGCAGGCAATGGTGCCCTTGCACCCATTCCATTGGGATCAAAACTAATAAACTCGTCAGAAGTTGGAGGAAGGGAAATTGATGACGATGATTCAGGTACTTCAGCAATAGATTCTCTAAAATTACGAATGGTAGATTCTTCCAGAGTCGTTGGAGGTTGTGCTAAATCAAGCATGCCTCTAGTAGTTGCCATGATTTTGGATGGAGAAGACATGGCAATGAGGAAGAAGAATGTGAAGAAAACAACATCAT

Coding sequence (CDS)

ATGTTGTGTTTGGGATTAGGAGCAGACCATGCAATTGGTCCTTTGGGCTTGCAATCTAACAATGACGCAGGCAATGGTGCCCTTGCACCCATTCCATTGGGATCAAAACTAATAAACTCGTCAGAAGTTGGAGGAAGGGAAATTGATGACGATGATTCAGGTACTTCAGCAATAGATTCTCTAAAATTACGAATGGTAGATTCTTCCAGAGTCGTTGGAGGTTGTGCTAAATCAAGCATGCCTCTAGTAGTTGCCATGATTTTGGATGGAGAAGACATGGCAATGAGGAAGAAGAATGTGAAGAAAACAACATCAT

Protein sequence

MLCLGLGADHAIGPLGLQSNNDAGNGALAPIPLGSKLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMPLVVAMILDGEDMAMRKKNVKKTTSX
Homology
[Close]
BLAST of CsaV3_4G030250 vs. NCBI nr
Match: KAE8649712.1 (hypothetical protein Csa_012861, partial [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 1.7e-48
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 

Query: 1   MLCLGLGADHAIGPLGLQSNNDAGNGALAPIPLGSKLINSSEVGGREIDDDDSGTSAIDS 60
           MLCLGLGADHAIGPLGLQSNNDAGNGALAPIPLGSKLINSSEVGGREIDDDDSGTSAIDS
Sbjct: 1   MLCLGLGADHAIGPLGLQSNNDAGNGALAPIPLGSKLINSSEVGGREIDDDDSGTSAIDS 60

Query: 61  LKLRMVDSSRVVGGCAKSSMPLVVAMILDGEDMAMRKKNVKKTTS 106
           LKLRMVDSSRVVGGCAKSSMPLVVAMILDGEDMAMRKKNVKKTTS
Sbjct: 61  LKLRMVDSSRVVGGCAKSSMPLVVAMILDGEDMAMRKKNVKKTTS 105

[Close]
BLAST of CsaV3_4G030250 vs. NCBI nr
Match: KAE8649705.1 (hypothetical protein Csa_011947, partial [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-24
Identity = 65/72 (90.28%), Postives = 66/72 (91.67%), Query Frame = 0 

Query: 28  LAPIPLGSKLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMPLVVAMI 87
           L P     KLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMPLVVAMI
Sbjct: 8   LHPFHWDQKLINSSEVGGREIDDDDSGTSAIDSLKLRMVDSSRVVGGCAKSSMPLVVAMI 67

Query: 88  LDGEDMAMRKKN 100
           L+GEDMAMRKKN
Sbjct: 68  LNGEDMAMRKKN 79

The following BLAST results are available for this feature:
BLAST of CsaV3_4G030250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649712.11.7e-48100.00hypothetical protein Csa_012861, partial [Cucumis sativus][more]
KAE8649705.12.2e-2490.28hypothetical protein Csa_011947, partial [Cucumis sativus][more]
BLAST of CsaV3_4G030250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G030250 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G030250.1CsaV3_4G030250.1mRNA