CsaV3_4G029330 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029330
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 18832619 .. 18833068 (-)
RNA-Seq ExpressionCsaV3_4G029330
SyntenyCsaV3_4G029330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCCCTGATATCTGTTTAGTTGGCTTGGCTGTTATTAAAATATGAAACTCATGACCCAATCCAAAGTGTTCACTAGCTTACTCCTTTTACAAATAGGTAGTAGAGAGACCCATCCCTTTAATGGTGGTACATAGAGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTTCCCCACATGTCCTGTTCTTTATTGGTTGCTGTCTATCATATCCGACAACTAGTTCCTCCACGAGTGGCTCCAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTCAGATGTCAAGGTGAGGTTCATAAAATCCCGGAACCTACTGCTTCTTGTGTAATCAGGGTGGAAGAGATTCATATGTTGATATTGTTAGGATGAAGAAGCAGCCAGCTGAGTTATATTTTTTTTGCTTTCAGAGCTCGAGGGACAGAGGATGATGACGCAGGCACTTAA

mRNA sequence

ATGTCCCCTGATATCTGTTTAGTTGGCTTGGCTAGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTTCCCCACATGTCCTGTTCTTTATTGGTTGCTGTCTATCATATCCGACAACTAGTTCCTCCACGAGTGGCTCCAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTCAGATGTCAAGAGCTCGAGGGACAGAGGATGATGACGCAGGCACTTAA

Coding sequence (CDS)

ATGTCCCCTGATATCTGTTTAGTTGGCTTGGCTAGGGAGATAGGGAGTTTATCTTTAGTCTGTCAAGTTTCCCCACATGTCCTGTTCTTTATTGGTTGCTGTCTATCATATCCGACAACTAGTTCCTCCACGAGTGGCTCCAACATAATAATGCCATTAGATTTTCTGCTTGCAGTTCAGATGTCAAGAGCTCGAGGGACAGAGGATGATGACGCAGGCACTTAA

Protein sequence

MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQMSRARGTEDDDAGT*
Homology
[Close]
BLAST of CsaV3_4G029330 vs. NCBI nr
Match: KGN54683.1 (hypothetical protein Csa_012862 [Cucumis sativus])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ 60
          MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ
Sbjct: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ 60

Query: 61 MSRARGTEDDDAGT 75
          MSRARGTEDDDAGT
Sbjct: 61 MSRARGTEDDDAGT 74

[Close]
BLAST of CsaV3_4G029330 vs. ExPASy TrEMBL
Match: A0A0A0KYT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G425720 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ 60
          MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ
Sbjct: 1  MSPDICLVGLAREIGSLSLVCQVSPHVLFFIGCCLSYPTTSSSTSGSNIIMPLDFLLAVQ 60

Query: 61 MSRARGTEDDDAGT 75
          MSRARGTEDDDAGT
Sbjct: 61 MSRARGTEDDDAGT 74

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029330 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54683.13.2e-33100.00hypothetical protein Csa_012862 [Cucumis sativus][more]
BLAST of CsaV3_4G029330 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYT01.5e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G425720 PE=4 SV=1[more]
BLAST of CsaV3_4G029330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029330.1CsaV3_4G029330.1mRNA