CsaV3_4G029100 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G029100
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 18630667 .. 18630858 (-)
RNA-Seq ExpressionCsaV3_4G029100
SyntenyCsaV3_4G029100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCATAGACTAGTTGTTTTGCCTAGCTTCAAGGAAGATTTGTTGCTACCTCCTTCGCACAAATCTGTTCTACACGTTGTGGCCCAGATCGTCGTTTTGCGTTTGTCAGTGTTGCAAAGAAGATCTATCGTCACAGATATGTTCAACTCAATTGGGGATATAATGTCACAAATATGTTTTGCTTGCTGA

mRNA sequence

ATGTATCATAGACTAGTTGTTTTGCCTAGCTTCAAGGAAGATTTGTTGCTACCTCCTTCGCACAAATCTGTTCTACACGTTGTGGCCCAGATCGTCGTTTTGCGTTTGTCAGTGTTGCAAAGAAGATCTATCGTCACAGATATGTTCAACTCAATTGGGGATATAATGTCACAAATATGTTTTGCTTGCTGA

Coding sequence (CDS)

ATGTATCATAGACTAGTTGTTTTGCCTAGCTTCAAGGAAGATTTGTTGCTACCTCCTTCGCACAAATCTGTTCTACACGTTGTGGCCCAGATCGTCGTTTTGCGTTTGTCAGTGTTGCAAAGAAGATCTATCGTCACAGATATGTTCAACTCAATTGGGGATATAATGTCACAAATATGTTTTGCTTGCTGA

Protein sequence

MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQICFAC*
Homology
[Close]
BLAST of CsaV3_4G029100 vs. NCBI nr
Match: KGN54660.1 (hypothetical protein Csa_012080 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 3.5e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC 60
          MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC
Sbjct: 1  MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC 60

Query: 61 FAC 64
          FAC
Sbjct: 61 FAC 63

[Close]
BLAST of CsaV3_4G029100 vs. ExPASy TrEMBL
Match: A0A0A0KYC8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418530 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0 

Query: 1  MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC 60
          MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC
Sbjct: 1  MYHRLVVLPSFKEDLLLPPSHKSVLHVVAQIVVLRLSVLQRRSIVTDMFNSIGDIMSQIC 60

Query: 61 FAC 64
          FAC
Sbjct: 61 FAC 63

The following BLAST results are available for this feature:
BLAST of CsaV3_4G029100 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54660.13.5e-25100.00hypothetical protein Csa_012080 [Cucumis sativus][more]
BLAST of CsaV3_4G029100 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G029100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYC81.7e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G418530 PE=4 SV=1[more]
BLAST of CsaV3_4G029100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G029100.1CsaV3_4G029100.1mRNA