CsaV3_4G028220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G028220
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 17638723 .. 17639637 (+)
RNA-Seq ExpressionCsaV3_4G028220
SyntenyCsaV3_4G028220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATACCGTATGGTTTCCTGGTGGAAAGGGTCAGTGCAATTATTAATATCTCCGCTGTAGGATCTGAAATAAGATTTGTTTTTCTCTGTTCTCCAAAATTTAGAATTTTGGAGCTTGAATAAACCACCGTTCCATTGGATAGGCTATTGTTTCTTTCCGTTGTGGTGGTGTGGTTAATAAGCTCGTTCGATAACTATTTAGTTTTAGTTATGGTCTTTTTGTTGTTGTCCCACACTATATTTATTAGAGTTTTTATCTTTCTTGAGGTGGATCAGAATCTATAGTTGAATACAAGAAGCAAGTTTACTCTTTGTTTCTTGAATTTAGCTTGAAATTTGAAAACGCTTGCAAAAAGTATACAACAAAGCAAAATGGTTATGAAACAAGCTTTGTAATTTGACTTCTCAAACTAAGCTCTACCTTTTGGTTTTATTATCTTTCGTTATAAACAAAATATTCATGCTTCTGATAAGTCGTTTCTTCTCCAGATCTCGAAGATGAGCAATGTGTCAGAGACACATACCTTAGTGAGTCAATCCTCTCTCTCAGTGCCTTTAATATTGGTTTTAGTTTCCTGTATTTGAAATTTATGCTTGTTTTCACAATTTTTATCATGGTCTTCTTCTTTCCTAAGGATATATTTGAACTTTTAGTCAAATTATTTATAAAATGAAATTGGACAAGAAACAGTTTCGTTGATATACGAATATGAATATGTTTGTACCTAATAATTATTTCTCATTTTCAGGTTTATGGGAGTCGAGCAAACCACACAAATCAATTTCGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAACATCTTTTTTTTTTGGGTTATCAAATGGTAGAGTGTTCTGTCCTTGCAGAAATTAACACTTCGGATTTTCCAAAAGGGAAAAAGTAA

mRNA sequence

ATGCTATACCGTATGGTTTCCTGGTGGAAAGGCTTGAAATTTGAAAACGCTTGCAAAAAGTATACAACAAAGCAAAATGATCTCGAAGATGAGCAATGTGTCAGAGACACATACCTTAGTTTATGGGAGTCGAGCAAACCACACAAATCAATTTCGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAACATCTTTTTTTTTTGGGTTATCAAATGGTAGAGTGTTCTGTCCTTGCAGAAATTAACACTTCGGATTTTCCAAAAGGGAAAAAGTAA

Coding sequence (CDS)

ATGCTATACCGTATGGTTTCCTGGTGGAAAGGCTTGAAATTTGAAAACGCTTGCAAAAAGTATACAACAAAGCAAAATGATCTCGAAGATGAGCAATGTGTCAGAGACACATACCTTAGTTTATGGGAGTCGAGCAAACCACACAAATCAATTTCGATCATTTTCTCTCTTGAGGTGCTGGTTTTCTACCCTAAACATCTTTTTTTTTTGGGTTATCAAATGGTAGAGTGTTCTGTCCTTGCAGAAATTAACACTTCGGATTTTCCAAAAGGGAAAAAGTAA

Protein sequence

MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVLVFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK*
Homology
[Close]
BLAST of CsaV3_4G028220 vs. NCBI nr
Match: KGN54562.1 (hypothetical protein Csa_012174 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 3.7e-47
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60
          MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL
Sbjct: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60

Query: 61 VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK 94
          VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK
Sbjct: 61 VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK 93

[Close]
BLAST of CsaV3_4G028220 vs. ExPASy TrEMBL
Match: A0A0A0L1V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G363440 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-47
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60
          MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL
Sbjct: 1  MLYRMVSWWKGLKFENACKKYTTKQNDLEDEQCVRDTYLSLWESSKPHKSISIIFSLEVL 60

Query: 61 VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK 94
          VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK
Sbjct: 61 VFYPKHLFFLGYQMVECSVLAEINTSDFPKGKK 93

The following BLAST results are available for this feature:
BLAST of CsaV3_4G028220 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54562.13.7e-47100.00hypothetical protein Csa_012174 [Cucumis sativus][more]
BLAST of CsaV3_4G028220 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G028220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1V91.8e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G363440 PE=4 SV=1[more]
BLAST of CsaV3_4G028220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G028220.1CsaV3_4G028220.1mRNA