CsaV3_4G027930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027930
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 17368572 .. 17368772 (-)
RNA-Seq ExpressionCsaV3_4G027930
SyntenyCsaV3_4G027930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAAGTCTTTCTTCCCCTCAAACTGCCGCCTTTTCTCGGTCTTTCTCTCCGGCGAGTCGCCGACAATCCAGCATCACTGACTTGCATTGTGAGCACCACTCCTAACGGCTTCGTCTAGGCTTTCGAACCATCGTTTCTTCTCCGTTTGAGACTCCAGCGTGAACAACAAGTTGTGCAACACGTTTTCGACGACTAG

mRNA sequence

ATGGGGAAAGTCTTTCTTCCCCTCAAACTGCCGCCTTTTCTCGGTCTTTCTCTCCGGCGAGTCGCCGACAATCCAGCATCACTGACTTGCATTGCTTTCGAACCATCGTTTCTTCTCCGTTTGAGACTCCAGCGTGAACAACAAGTTGTGCAACACGTTTTCGACGACTAG

Coding sequence (CDS)

ATGGGGAAAGTCTTTCTTCCCCTCAAACTGCCGCCTTTTCTCGGTCTTTCTCTCCGGCGAGTCGCCGACAATCCAGCATCACTGACTTGCATTGCTTTCGAACCATCGTTTCTTCTCCGTTTGAGACTCCAGCGTGAACAACAAGTTGTGCAACACGTTTTCGACGACTAG

Protein sequence

MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD*
Homology
[Close]
BLAST of CsaV3_4G027930 vs. NCBI nr
Match: KGN54530.1 (hypothetical protein Csa_012446 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-22
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD 57
          MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD
Sbjct: 1  MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD 56

[Close]
BLAST of CsaV3_4G027930 vs. ExPASy TrEMBL
Match: A0A0A0KY44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358680 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD 57
          MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD
Sbjct: 1  MGKVFLPLKLPPFLGLSLRRVADNPASLTCIAFEPSFLLRLRLQREQQVVQHVFDD 56

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027930 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54530.11.1e-22100.00hypothetical protein Csa_012446 [Cucumis sativus][more]
BLAST of CsaV3_4G027930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G027930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KY445.4e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358680 PE=4 SV=1[more]
BLAST of CsaV3_4G027930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027930.1CsaV3_4G027930.1mRNA