CsaV3_4G027490 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G027490
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 16645536 .. 16645707 (-)
RNA-Seq ExpressionCsaV3_4G027490
SyntenyCsaV3_4G027490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATATGGGAATTCACAACTTGGTTAGCAAAGGAGAGGAATTTCAATGGAGTTTTAAGGTCAACTTTTTTGGAACAACGTTGTTTTGGTGCTATCTGCAAAAGCCAAATTTCAGCGTCTCGTTTGAATCTTTTTGGGTTGAAAAATCTCACCCTTGGCTCAATTCTAG

mRNA sequence

ATGATGATATGGGAATTCACAACTTGGTTAGCAAAGGAGAGGAATTTCAATGGAGTTTTAAGGTCAACTTTTTTGGAACAACGTTGTTTTGGTGCTATCTGCAAAAGCCAAATTTCAGCGTCTCGTTTGAATCTTTTTGGGTTGAAAAATCTCACCCTTGGCTCAATTCTAG

Coding sequence (CDS)

ATGATGATATGGGAATTCACAACTTGGTTAGCAAAGGAGAGGAATTTCAATGGAGTTTTAAGGTCAACTTTTTTGGAACAACGTTGTTTTGGTGCTATCTGCAAAAGCCAAATTTCAGCGTCTCGTTTGAATCTTTTTGGGTTGAAAAATCTCACCCTTGGCTCAATTCTAG

Protein sequence

MMIWEFTTWLAKERNFNGVLRSTFLEQRCFGAICKSQISASRLNLFGLKNLTLGSILX
Homology
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BLAST of CsaV3_4G027490 vs. NCBI nr
Match: KGN54737.2 (hypothetical protein Csa_012473, partial [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 

Query: 1  MMIWEFTTWLAKERNFNGVLRSTFLEQRCFGAICKSQISASRLNLFGLKNLTLGSIL 58
          MMIWEFTTWLAKERNFNGVLRSTFLEQRCFGAICKSQISASRLNLFGLKNLTLGSIL
Sbjct: 1  MMIWEFTTWLAKERNFNGVLRSTFLEQRCFGAICKSQISASRLNLFGLKNLTLGSIL 57

The following BLAST results are available for this feature:
BLAST of CsaV3_4G027490 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54737.21.8e-23100.00hypothetical protein Csa_012473, partial [Cucumis sativus][more]
BLAST of CsaV3_4G027490 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G027490 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G027490 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G027490.1CsaV3_4G027490.1mRNA