
CsaV3_4G026450 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACACGAGTCTTGTGTCTTCTCCATGAAGATCTGTCTGTCTCAAACAAGCTAGGGTTTCTCTCTCCTCATGTTAGAGAGAGAAAGAGAGTTTCCTTTCCAAGTGGGGTAATAATAGATCCAATCTCTCTCTCTCTCAGCTTATTCATTCTCTTCTTCTTCTTCTAATCATTCCAAACTTTAAATCTCTCTCTCTCTCTGGTTTTGTGCATATAGAAAGTTAGCAAATTATGGAAGTAGTAGGAGAATGTTCAAACACAAGATCAAGTGATGTTGATGATAATAGTAATAAGAAATCAGAAAATAGCAGCAGTAGTACTGAATTTGGAAATGAAGGAAGTTCGAGCAACAGCACCATAGAAGAGAATAATAATAATGATCATGATCAACACAAGACCAAGCCTCCCACTGTCAGACCTTATGTCAGATCTAAACTCCCGAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTCGTTCATGCTGTCGAAAGACTTGGGGGTCAAGAAAGTAATTTCCATAACTTCTTCTTCTTCTTTCTGACCTCTGGGGTCGAAACTTATATTAATTATCGTCGAGTTGTGCTCCTTTTAGTTTTCCTTTTCCCACCTCTTTGCTTTTGTCTCCTGATTTTATGAATTATTGGTTTAATAATTGGAAGGGGAGGATTGAATTGTTTGAAATAGTAATTCATGCTTTTTGTCTATATTGAGATTTTCTCGAATGATTTAACCTAGTACCCTTTAAATTTAATCTACCTTTGGGGTGAGGGTTTTTTTTTTTTTTTTTTGAGAAGGTTATTAATGTGTTTTTGATCGAGTGGCTTTAAGGGTGGTCGTAATTTAATCTAGTATTAGAGTATGGATAATTATTGGGTTTTTTTTGGGGAGATCCTTGAGTTAATTTGTTGATAGGGTTATGTAGATTTTTATCAAAATCTCTTTTTCTTGGAGTGAATTGTTGGAATTTTGACTATATCTATTAGATAGATTGTTAGTGATTTTCTATCATGTTTTATATTTTGTTTTTAGAAAATCTTATGGTTTAATGATTTTTGTCTGTGTGTATATAGATGCTACTCCTAAGTTGGTACTTCAGTTAATGAACATCAAAGGACTAAGTATTGCCCATGTCAAAAGCCATCTTCAGGTTTAATAATCTCTCTCTCTTTTCCAGAAATTTTATTGCATAATTTGGGCTTTTTTTTATAAAAAAAATATGAAAAACTAAACAAAAATTTTAGTGCTTAATTTAGATGTCAAATTTCAGTTTCAATTTCTAATTTTATTTTTTTCTTTCATTTCTTTCAGATGTATAGAAGCAAGAAGACGAATGAGCCAGGTCAAGGTATAAACTATTTATTAAGTTTAATTTCTACATTTATTCCTAATATATTTCATTTTTTTCTATAACTTGTAATGAAAATTCTGACAGTTGTGGGAGATCAAAGGGTTCTTATGGCTGAAAGTAATAATGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCAACGATATAATTCAAGTTACCCCTCTAATCTTTTTCGGTAAGGAATTGATCTAATTAGTGTTTTCTTTTCAATTATTCTATTGAAATTAGGTTTAGTAATCAAAGTAATAATATAATATTTTTTCGAAAATCATTCCAAACTCATTCGACTTCTCTTGTCAGATTCGGAGGGTCATCGTGGAAGGCTATCGAAAACAAAACAATACAATCCCCATTTATGGAGAAGTCAGCCTCAATGACTACATTGACTCAAGCAAGATCGAGCCTGTTCAGCAGCAACAAGAGCAATGCACCGGAAATGATCAACCGTAATCTTCGCATGTCGATCAGTGAATCCAATACCACGACGAGCAAAAGGCAAGATGAGAGGGAAAAAGAAGATTCATGCAGTGAAATTATTCCACAGAAAAGAAAAAGGGCCACAGATAATGGAGAAATTGATTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGAAAAGAGAAGTATAGATCAAGATGAAGAAGTTTTAGAAAGTAGAACTGATTTATCTCTATCTTTATGCTCATATTATTAATTCAATGTCTCCTTAGTCGGCAATGGAAGAGGAAAAAGAGCGAGAAATTAGCAATAGAGATGAAGTACCCTTCAAAAGGATGCAACTGCAACACGAGGAACTTCTCAAGTGGGTTGTTCAATTTGGTACTACTCTCAGTTGAGCACGTTCAAATGCTAAATTAGCTCGATGGAATCTGGTTCGTTAATGTTGATAATGACTATGCCGCCTAGCGAGAGAGAGTAAGTACTCTGGATCTGACTATATGAATCATTCTTGAGAGACCAAAATTCTAAGTGAGATACTGAGGTACTTATTTTCCACTTGTAGCTTATAAGT ATGGAAGTAGTAGGAGAATGTTCAAACACAAGATCAAGTGATGTTGATGATAATAGTAATAAGAAATCAGAAAATAGCAGCAGTAGTACTGAATTTGGAAATGAAGGAAGTTCGAGCAACAGCACCATAGAAGAGAATAATAATAATGATCATGATCAACACAAGACCAAGCCTCCCACTGTCAGACCTTATGTCAGATCTAAACTCCCGAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTCGTTCATGCTGTCGAAAGACTTGGGGGTCAAGAAAATGCTACTCCTAAGTTGGTACTTCAGTTAATGAACATCAAAGGACTAAGTATTGCCCATGTCAAAAGCCATCTTCAGATGTATAGAAGCAAGAAGACGAATGAGCCAGGTCAAGTTGTGGGAGATCAAAGGGTTCTTATGGCTGAAAGTAATAATGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCAACGATATAATTCAAGTTACCCCTCTAATCTTTTTCGATTCGGAGGGTCATCGTGGAAGGCTATCGAAAACAAAACAATACAATCCCCATTTATGGAGAAGTCAGCCTCAATGACTACATTGACTCAAGCAAGATCGAGCCTGTTCAGCAGCAACAAGAGCAATGCACCGGAAATGATCAACCGTAATCTTCGCATGTCGATCAGTGAATCCAATACCACGACGAGCAAAAGGCAAGATGAGAGGGAAAAAGAAGATTCATGCAGTGAAATTATTCCACAGAAAAGAAAAAGGGCCACAGATAATGGAGAAATTGATTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGAAAAGAGAAGTATAGATCAAGATGAAGAAGTTTTAGAAAGTAGAACTGATTTATCTCTATCTTTATGCTCATATTATTAA ATGGAAGTAGTAGGAGAATGTTCAAACACAAGATCAAGTGATGTTGATGATAATAGTAATAAGAAATCAGAAAATAGCAGCAGTAGTACTGAATTTGGAAATGAAGGAAGTTCGAGCAACAGCACCATAGAAGAGAATAATAATAATGATCATGATCAACACAAGACCAAGCCTCCCACTGTCAGACCTTATGTCAGATCTAAACTCCCGAGACTCCGTTGGACTCCCGATCTTCACCTCCGTTTCGTTCATGCTGTCGAAAGACTTGGGGGTCAAGAAAATGCTACTCCTAAGTTGGTACTTCAGTTAATGAACATCAAAGGACTAAGTATTGCCCATGTCAAAAGCCATCTTCAGATGTATAGAAGCAAGAAGACGAATGAGCCAGGTCAAGTTGTGGGAGATCAAAGGGTTCTTATGGCTGAAAGTAATAATGGAGATCGCAACATATTTAATGTCAGCCAAATCCCAATGTTCCAACGATATAATTCAAGTTACCCCTCTAATCTTTTTCGATTCGGAGGGTCATCGTGGAAGGCTATCGAAAACAAAACAATACAATCCCCATTTATGGAGAAGTCAGCCTCAATGACTACATTGACTCAAGCAAGATCGAGCCTGTTCAGCAGCAACAAGAGCAATGCACCGGAAATGATCAACCGTAATCTTCGCATGTCGATCAGTGAATCCAATACCACGACGAGCAAAAGGCAAGATGAGAGGGAAAAAGAAGATTCATGCAGTGAAATTATTCCACAGAAAAGAAAAAGGGCCACAGATAATGGAGAAATTGATTTGAGTTTATCCCTAAAGATTGCACCAAGGGAAGAGATCAAGATTGAAAAGAGAAGTATAGATCAAGATGAAGAAGTTTTAGAAAGTAGAACTGATTTATCTCTATCTTTATGCTCATATTATTAA MEVVGECSNTRSSDVDDNSNKKSENSSSSTEFGNEGSSSNSTIEENNNNDHDQHKTKPPTVRPYVRSKLPRLRWTPDLHLRFVHAVERLGGQENATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKTNEPGQVVGDQRVLMAESNNGDRNIFNVSQIPMFQRYNSSYPSNLFRFGGSSWKAIENKTIQSPFMEKSASMTTLTQARSSLFSSNKSNAPEMINRNLRMSISESNTTTSKRQDEREKEDSCSEIIPQKRKRATDNGEIDLSLSLKIAPREEIKIEKRSIDQDEEVLESRTDLSLSLCSYY* Homology
BLAST of CsaV3_4G026450 vs. NCBI nr
Match: XP_011653703.1 (probable transcription factor KAN4 [Cucumis sativus] >KAE8649567.1 hypothetical protein Csa_017992 [Cucumis sativus]) HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. NCBI nr
Match: XP_008464218.1 (PREDICTED: probable transcription factor KAN3 isoform X1 [Cucumis melo] >KAA0037734.1 putative transcription factor KAN3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 539.3 bits (1388), Expect = 2.2e-149 Identity = 290/307 (94.46%), Postives = 295/307 (96.09%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. NCBI nr
Match: XP_008464219.1 (PREDICTED: probable transcription factor KAN4 isoform X2 [Cucumis melo]) HSP 1 Score: 532.7 bits (1371), Expect = 2.1e-147 Identity = 289/307 (94.14%), Postives = 294/307 (95.77%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. NCBI nr
Match: XP_038882968.1 (probable transcription factor KAN3 [Benincasa hispida]) HSP 1 Score: 419.1 bits (1076), Expect = 3.3e-113 Identity = 250/312 (80.13%), Postives = 266/312 (85.26%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. NCBI nr
Match: TYK10927.1 (putative transcription factor KAN3 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 351.7 bits (901), Expect = 6.5e-93 Identity = 190/204 (93.14%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-21 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20 Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.2e-19 Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.7e-17 Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy TrEMBL
Match: A0A0A0L1D1 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G312300 PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 3.3e-151 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy TrEMBL
Match: A0A5A7T2P2 (Putative transcription factor KAN3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00300 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149 Identity = 290/307 (94.46%), Postives = 295/307 (96.09%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy TrEMBL
Match: A0A1S3CMH3 (probable transcription factor KAN3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149 Identity = 290/307 (94.46%), Postives = 295/307 (96.09%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy TrEMBL
Match: A0A1S3CL07 (probable transcription factor KAN4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502151 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 1.0e-147 Identity = 289/307 (94.14%), Postives = 294/307 (95.77%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. ExPASy TrEMBL
Match: A0A5D3CG27 (Putative transcription factor KAN3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00060 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 3.2e-93 Identity = 190/204 (93.14%), Postives = 193/204 (94.61%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37 Identity = 133/316 (42.09%), Postives = 175/316 (55.38%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 146.7 bits (369), Expect = 3.0e-35 Identity = 98/235 (41.70%), Postives = 142/235 (60.43%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23 Identity = 61/107 (57.01%), Postives = 76/107 (71.03%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 4.4e-23 Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of CsaV3_4G026450 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.7e-22 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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