CsaV3_4G026370 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTCGGACGATGAAAGCGAGGAGATGGAGTTGGATCTCTCCTCTCCGGGTGTTGTTACAAAGTACAAAAATGCTGCTGAGATCATAAACAGTCACTAATCTTTGTCTTTCCATTGCATGTCTAATTGAGCTCGCGGCATAGTTACTCTTCAATTTTTTGTTATATGAATTATGACATTGTTCTTTGTAACACAACATTCATGCCGAGGCATTGCAGCTGGTGATATCCCAATGTAAACCAAAAGCAAAAATCGTTGACATTTGCGAAATAGGCGATTCCTTCACTTGAGAGTAGGTTTTAACATTGGAACTTCTAAGTTTTTCCTCCTTTTGTTTTGATCGTATTTTTAGTAATCTTTTTTTTGCTTGTGAAGGCAAACAGTAAACATATACAAGAATGTTAAGAAGAAGATGAAACAGTGATGGAAGAAGGAGATATACTCAAGATGTAACCAAATTATACATTGACTGGTTGCTGTTTTCTTGTGGCGTGTTTAATGACAGTTGATTGATGATGGATTTTTCTTACGGTAGTGATATGGGCTGCCATATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAGGTAATAGTTCTTTATACTATTATTTGGAACATTTGTCTTTCGATTTAATTTCCATTGATCAATGTGCACTTACTAGAGATTATGTTGATTAATTGTTTGTACTCTAAACTACTTTTTTTAAGCATGGTTATATTGTGTATCTCAGTCATTTTGGTGCTTAAGTTAGGAACTTTGTCTTAAGCTGTGGTTTAGCATAGTGTGAAGTTTTTGTCATGGCTATTCTTATAAGGAATAAATACTTCTATATGGTAGGGACTTTTTCGAAGTTACACTTGTAAATATGAAGTCTTGGCTAGTTATTTTCAATTTTTGAGTATGACATTGTTAACTTGTTTATGTTCTGGATCCCATGTGTGTTTGTTTATCATAATTTGTAGGATTCAGTTCCTCTGTTTCATGCTGGTATTTGTTTATCAGAATTTATTAGATTCATCCCCTCAAGTCCTTTCTTTTGAATCGTCTCGTCTAACCCATGGGGAAGAGATTGATCAAACATTTTAATGGCAACTTTGCCGAGGTGATCAGTTATTTGTTGATTACCTCTTTTCCCTGTTGCCTATATTGAATTTGGTCTTGATTGGGTCCTTGTAGGTGGACATACTGTGTATGGCTGATGCCTATGGTCTCAGTGATCTATATTTTTCAGAGAATTTTTTTAGTGCTAGTATTTATGCAGTTTACGCTATAACTCAAGTTTTGATGTTCTAA ATGTCGTCGGACGATGAAAGCGAGGAGATGGAGTTGGATCTCTCCTCTCCGGGTGTTGTTACAAATGATATGGGCTGCCATATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAGGTGGACATACTGTGTATGGCTGATGCCTATGGTCTCAGTGATCTATATTTTTCAGAGAATTTTTTTAGTGCTAGTATTTATGCAGTTTACGCTATAACTCAAGTTTTGATGTTCTAA ATGTCGTCGGACGATGAAAGCGAGGAGATGGAGTTGGATCTCTCCTCTCCGGGTGTTGTTACAAATGATATGGGCTGCCATATTGATGGGTTTATCGCTGTAGTTCTTCACACTCATGTTCTGCAAGAAGGTCCAGTGACTGGAAGGGCAGCCGATGTCATTGCAGCTGCTAACACTGCTGCTGAAGTTACCTTAATGCTTGTTAGGCCTGGGAAAAAGGTGGACATACTGTGTATGGCTGATGCCTATGGTCTCAGTGATCTATATTTTTCAGAGAATTTTTTTAGTGCTAGTATTTATGCAGTTTACGCTATAACTCAAGTTTTGATGTTCTAA MSSDDESEEMELDLSSPGVVTNDMGCHIDGFIAVVLHTHVLQEGPVTGRAADVIAAANTAAEVTLMLVRPGKKVDILCMADAYGLSDLYFSENFFSASIYAVYAITQVLMF* Homology
BLAST of CsaV3_4G026370 vs. NCBI nr
Match: KAE8649565.1 (hypothetical protein Csa_017967 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 2.0e-52 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. NCBI nr
Match: RRT44905.1 (hypothetical protein B296_00048972 [Ensete ventricosum]) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19 Identity = 67/132 (50.76%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. NCBI nr
Match: XP_031739584.1 (LOW QUALITY PROTEIN: ERBB-3 BINDING PROTEIN 1 [Cucumis sativus]) HSP 1 Score: 104.8 bits (260), Expect = 5.1e-19 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. NCBI nr
Match: RWV92075.1 (hypothetical protein GW17_00045596, partial [Ensete ventricosum]) HSP 1 Score: 101.7 bits (252), Expect = 4.3e-18 Identity = 60/110 (54.55%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. NCBI nr
Match: RRT59253.1 (hypothetical protein B296_00025853 [Ensete ventricosum]) HSP 1 Score: 101.7 bits (252), Expect = 4.3e-18 Identity = 60/110 (54.55%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy Swiss-Prot
Match: M1CZC0 (ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum OX=4113 GN=EBP1 PE=2 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18 Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy Swiss-Prot
Match: Q96327 (ERBB-3 BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=EBP1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 9.9e-18 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy Swiss-Prot
Match: Q6AYD3 (Proliferation-associated protein 2G4 OS=Rattus norvegicus OX=10116 GN=Pa2g4 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy Swiss-Prot
Match: P50580 (Proliferation-associated protein 2G4 OS=Mus musculus OX=10090 GN=Pa2g4 PE=1 SV=3) HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy Swiss-Prot
Match: Q9UQ80 (Proliferation-associated protein 2G4 OS=Homo sapiens OX=9606 GN=PA2G4 PE=1 SV=3) HSP 1 Score: 56.2 bits (134), Expect = 2.7e-07 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy TrEMBL
Match: A0A426XZG2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00048972 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 6.5e-20 Identity = 67/132 (50.76%), Postives = 78/132 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy TrEMBL
Match: A0A426Z5P9 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00025853 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.1e-18 Identity = 60/110 (54.55%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy TrEMBL
Match: A0A444D1S5 (Uncharacterized protein (Fragment) OS=Ensete ventricosum OX=4639 GN=GW17_00045596 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.1e-18 Identity = 60/110 (54.55%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy TrEMBL
Match: A0A4D9ABN7 (Peptidase_M24 domain-containing protein OS=Salvia splendens OX=180675 GN=Saspl_025117 PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 3.5e-18 Identity = 54/92 (58.70%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. ExPASy TrEMBL
Match: A0A6I9QEQ4 (ERBB-3 BINDING PROTEIN 1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034086 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 6.0e-18 Identity = 51/63 (80.95%), Postives = 52/63 (82.54%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. TAIR 10
Match: AT3G51800.1 (metallopeptidase M24 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-19 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. TAIR 10
Match: AT3G51800.2 (metallopeptidase M24 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-19 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of CsaV3_4G026370 vs. TAIR 10
Match: AT3G51800.3 (metallopeptidase M24 family protein ) HSP 1 Score: 90.9 bits (224), Expect = 7.1e-19 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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