CsaV3_4G025900 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G025900
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription termination/antitermination protein NusG
Location	chr4: 15249154 .. 15252427 (+)
RNA-Seq Expression	CsaV3_4G025900
Synteny	CsaV3_4G025900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAATACTATTAAAAATGGTTATAAAATTAAAAGTAAAAGAACTCAATTACTACTAATGTTTAGGACTAAATATGTTGTGTAAAGTTACTAAATTGTGGCTTCCAAATGGGCTCAAACTATCCAGCCCGGCCCAAGAAAATGTATCACTGATTCTCAATGCTGACAAATCGGCTCGCAACCCAAATTATCTTCTTCCTCAACCAATCCGACAAATGGGAGTTTCAATAACGACCTCTCATTGGCGTTTATCGTCACCGGCGACTCCACACCCGACCCAATAATCGGAAACTTGTTTCCGTAATCAAAATGGCCTGTGGGCTTCTGGTTTGGAGCTCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCAGTCTCCGCCTCCGTCGAAACCCCCGCCGCCGCCGCTGACGATGCTCAGCAGCTGTCGGTGAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATCAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGCCAAGAAATTGTCGAACGCCTTGCTCGTTGTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGGTGCAATTTCTTCATTCCACTGTTTGGATTTTGGGTTTGTGGCACAAATTGTATGGATTTTTTTGTGTTGGTTTTGAAATTCATTAACAGAATCCAATATATGAAAATCTACTGAGTTTCATTGTTTGAGAACTTGAGGGAATGCTTAAATGTTTCTGTAAACATAAATGTATATGTATATTTCATTAGCTTGATTATCTTGCAATGTAGTACTTAGATTGGAGAATAAAGGATTTGAAACAACAGCTAAAAGATTAAATAATGCGGTCGTTTTTTTTCAATTTTACATAAGATGCCAAAGAAACAAAGGTTTTCTAAAAAGGAATGAAGAAATGGGATTTATTTTTTTAGTTGCTACAAACAGTAGAGACGATAATGTGTATCAACGTCTCAAGTTCTTCAGTTGATTGCAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCCAAGGTCGGAAACACGTGAGTCTTTATTTTGTTTTCTTCTTTGTAAAATCAGTTGAGCAACTATTTGTTCTCTGGGAACACTCTACTTGAAATTACTTGAGACTCCTGACAGGAAATGAGAGAACTGCATTGGTCCTTTGGGATTATGTAATTTGTATTTCTTGTAGTCTATAGATTCTGGAGTCTAGGAGGTTATGGCACAGAACTGATTCATAACTTGATCTGGATTTCAAAACTAGGAATAATTTTAGATTCAAAATTCAGATTTTCATACTACGATCGACAGTAACTTTCATCTGAAATTTTAGATATAGAAGCTGTATATTTCTCTATGTCAATTATGTGTTCTCAGTCAGTCTGTTGTTCTGATATAGTTTTGGCAATATACAGTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATTTTCAAAGAGGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAATACTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTATGTTGTTTTCTTTTAGATGAAGAGTTTGCTACAAAGAGAATAATTAGAAGAAAGTTGTGTCCTAATTGATTGATTTCCTTCATGCAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGAATGAATTTACTTTCTCAGTCATGGTAAGTAAAGCAATCACAAGACCCATTTATTTGAGGTTTCTTTCTTCCACTTTGATGCAAAATGTTATAATCAGTCAAAACCCACATCTATTCCATTAAGTTCAAGTGGAAAACAGAAAAGCCATACAAACCATTGGTCTTAGTCAATACTTAATCATCACAAGAACTTGCTAGGATCTTGTTTTGGTTTTTCAAATCATTCAAAGCACTGTTGAAATCGTCAATAATAGGCCTTTATTTGTGATGAATCTTTTCCAAATCACAATAGATTCAGACTTAGTATCATGTCTTCAAGATTTTGACATTGTTTGAGATAGAAGTAAAAGATGTCATTGTTTCGTTATGAAGTAACGCTTCTAGTCAACCCTTCCTACTCAATCTTTGTACGAGTTGTAGATTTAAAGAAAAGGAAGATTTTTCCAAGAATATTGTTTCAAGATTTGAGTTGTTTTTATTCCTTTAGAAAATGCTAATCAGAGCGCCTTTGATAGCTGAGCACTCTTCACTTTACTCTGTCACTGTTTTGCAGTAAAGTGTGGACGAAACTCATGGAGTTGGAGAATAAGCAAGCAGCTCCAGCTCTCAGCTCTCAAAGCATATTCATGAACCAAAGAACATAAAAGTACTGTTGCTTGAATTGACAGACAGCCCACGTTGATGAACATGTCCACAAATCAGCTTTGCTTCTTTGAAATTACTCTGCATTCGGAGATTCTTACTGGAAATCAAATAGGATCTTGAAGGAATTGGCAGCCAAATGTATTCTTGTTAGACTTTTGAGAAAATTAAACTAGGAAATATCATGATGAAATCATACCTGAGTAGCTCTTGTAAATTCAAATATCTTTGAAGTCACAAATTCACCATAATTATAGAGGTGTTCAAGATCCGATTCGATCTACCCGTCAAACCGGACCAAACTAAAAAGTTTGATTTTGGATGTATACCAAGCCAAACCAACTTGTTTGTTTGCTCCAAACCAAAGTGAACTAAATATCTGGTTCAATTATAATACATATATGTATATAAATATGACTTATTTTGTTATTTTGTTTTAACTTTTAACTAATATAAACGGTTTGAT

mRNA sequence

ATGGCCTGTGGGCTTCTGGTTTGGAGCTCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCAGTCTCCGCCTCCGTCGAAACCCCCGCCGCCGCCGCTGACGATGCTCAGCAGCTGTCGGTGAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATCAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGCCAAGAAATTGTCGAACGCCTTGCTCGTTGTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCCAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATTTTCAAAGAGGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAATACTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGA

Coding sequence (CDS)

ATGGCCTGTGGGCTTCTGGTTTGGAGCTCAGTTTCCCTTTGCTCTACCTCTTTCCCTGCACTTTCCTTCTCTCTCTCTTCTTCCAGACGTACCCAATTATCAGTCTCCGCCTCCGTCGAAACCCCCGCCGCCGCCGCTGACGATGCTCAGCAGCTGTCGGTGAGGGAGCGGAGGAAGCTGAGGAACGAGAGAAGAGAGATCAAAACCACCACCAATTGGAGGGAAGAAGTAGAGGAGAGGCTCTGCAGGAAGCCCAAGAAGGAATTTGCCAATTGGACTGAGAAGCTCAATCTTGATTACCTCGCTAAATTGGGTCCTCAATGGTGGGTTATGCGTGTTGCTCGTGTTCGAAGCCAAGAAATTGTCGAACGCCTTGCTCGTTGTCTTGCTAGGAACTACCCTGACCTCGATTTTAAGATATATTACCCGTCGGTTAAGGAGAAGAGGAAATTAAAGAATGGTACTTACACCGTTACACCAAAAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTGTCATGAACAAGGAGATTCATGACTTCATTAGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGTGCCAAGGTCGGAAACACTAAACGACAGATAAACAAACCAAAGCCAGTATCCGAAGCTGACATGGAAGCAATTTTCAAAGAGGCAAAGGATGAGCAAGAAAGACACGACCAGGCTTTCCTAGAGAAAGAGCAAGAGGAAGCTCCAAATACTAGCGCACTCAAAACTGACTTAGATACAAATGGTACTACTGCTACGAAGCACAAAGGAAGACCCAAAAAAGCTGTTAATACTTTGTCGCCAGGGTCAACAGTTCGAGTGGCATCAGGTACTTTTGCAGAATTTGAAGGCTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACTGTGGGATTTACACTATTTGGGAAGGAAACCCTTGTAGATCTTGACATTGGTGATATTATAGTAGAGACAAAATGA

Protein sequence

MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKLRNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVETK*

Homology

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BLAST of CsaV3_4G025900 vs. NCBI nr
Match: XP_004147896.1 (uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical protein Csa_018004 [Cucumis sativus])

HSP 1 Score: 632.1 bits (1629), Expect = 2.7e-177
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLVDLDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

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BLAST of CsaV3_4G025900 vs. NCBI nr
Match: XP_008448915.1 (PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo] >XP_008448924.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo])

HSP 1 Score: 601.7 bits (1550), Expect = 3.9e-168
Identity = 310/326 (95.09%), Postives = 316/326 (96.93%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SASVETPAAAADD QQLS R+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN+SALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLVDLDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

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BLAST of CsaV3_4G025900 vs. NCBI nr
Match: XP_038880828.1 (transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida])

HSP 1 Score: 580.9 bits (1496), Expect = 7.0e-162
Identity = 298/326 (91.41%), Postives = 313/326 (96.01%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MACGLL+WS +SL S SFPALSFSLSS +RTQLS+SA+VETP +AADD QQLS RERRKL
Sbjct: 1   MACGLLIWSPISLRSISFPALSFSLSSPKRTQLSISATVETP-SAADDIQQLSARERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA WTEKLNLDYL+KLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLSKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKRKLKNGTYTV PKA+FPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKALFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQ+ A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQDRA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN+SAL+TDLDTNGTTATK KGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALETDLDTNGTTATKQKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLVDLDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 325

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BLAST of CsaV3_4G025900 vs. NCBI nr
Match: XP_022151589.1 (uncharacterized protein LOC111019492 [Momordica charantia])

HSP 1 Score: 556.2 bits (1432), Expect = 1.9e-154
Identity = 289/325 (88.92%), Postives = 307/325 (94.46%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+L
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVET 326
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIVVET 323

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BLAST of CsaV3_4G025900 vs. NCBI nr
Match: XP_022931956.1 (uncharacterized protein LOC111438223 [Cucurbita moschata])

HSP 1 Score: 550.1 bits (1416), Expect = 1.3e-152
Identity = 284/326 (87.12%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+L
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDYLAKLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+TDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Sbjct: 241 PNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLV+LDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVELDIGDIIVETK 322

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BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot
Match: Q06795 (Transcription termination/antitermination protein NusG OS=Bacillus subtilis (strain 168) OX=224308 GN=nusG PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 56/215 (26.05%), Postives = 86/215 (40.00%), Query Frame = 0


Query: 108 WWVMRVARVRSQEIVERL-ARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPG 167
           W+V+        ++   L  R  +    D  F++  P  +E+  +KNG   V  K VFPG
Sbjct: 5   WYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPE-EEETDIKNGKKKVVKKKVFPG 64

Query: 168 SVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQE 227
            V +  VM  +    +R   GV GFVG+         +KP P+   + E I K    ++ 
Sbjct: 65  YVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSG-----SKPTPLLPGEAETILKRMGMDER 124

Query: 228 RHDQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAE 287
           + D  F  KE                                       TV+V  G FA 
Sbjct: 125 KTDIDFELKE---------------------------------------TVKVIDGPFAN 174

Query: 288 FEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           F GS+++++    KV V   +FG+ET V+L+   I
Sbjct: 185 FTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQI 174

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BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot
Match: Q9HWC4 (Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nusG PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.5e-09
Identity = 44/218 (20.18%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V+       + ++  L   +     + +F       +E  +++NG    + +  
Sbjct: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEEEFGEILVPTEEVVEMRNGQKRKSERKF 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           FPG V ++  MN+     +++   V GF+G          +KP P+++ + +AI +   D
Sbjct: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTA-------DKPAPITDREADAILRRVAD 120

Query: 224 EQERHDQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
             +                                  K +PK       PG TVRV  G 
Sbjct: 121 SGD----------------------------------KPKPK---TLFEPGETVRVIDGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  ++ V   +FG+ T V+L+   +
Sbjct: 181 FADFNGVVEEVNYEKSRIQVAVLIFGRSTPVELEFSQV 174

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BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot
Match: P65591 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=nusG PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.5e-09
Identity = 48/218 (22.02%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++   
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQV-- 120

Query: 224 EQERHDQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
                 Q  +EK                            PK  V     G  VRV  G 
Sbjct: 121 ------QTGIEK----------------------------PKPKVE-FEVGQQVRVNEGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot
Match: P65592 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=nusG PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.5e-09
Identity = 48/218 (22.02%), Postives = 89/218 (40.83%), Query Frame = 0


Query: 104 LGPQWWVMRVARVRSQEIVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAV 163
           +  +W+V++      + +   L   +AR      F      V++   ++NG  T++ +  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 164 FPGSVFIRCVMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKD 223
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++   
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQV-- 120

Query: 224 EQERHDQAFLEKEQEEAPNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGT 283
                 Q  +EK                            PK  V     G  VRV  G 
Sbjct: 121 ------QTGIEK----------------------------PKPKVE-FEVGQQVRVNEGP 174

Query: 284 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 322
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot
Match: P35872 (Transcription termination/antitermination protein NusG OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=nusG PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.5e-09
Identity = 53/201 (26.37%), Postives = 83/201 (41.29%), Query Frame = 0


Query: 127 RCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMN-----KEIHDF 186
           R  A    D  F++  P+ +     + G   V  K +FPG +FI+  +       E  + 
Sbjct: 25  RIKAFGLQDKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEV 84

Query: 187 IRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEAP 246
           +R   G+ GFVGA +        +P P+S  ++  I                        
Sbjct: 85  VRGTPGITGFVGAGM--------RPVPLSPDEVRHI------------------------ 144

Query: 247 NTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKV 306
                   L+ +G    K      KA      G  VRV SG FA+F G++ ++N + GKV
Sbjct: 145 --------LEVSGLLGKK---EAPKAQVAFREGDQVRVVSGPFADFTGTVTEINPERGKV 182

Query: 307 TVGFTLFGKETLVDLDIGDII 323
            V  T+FG+ET V+LD   ++
Sbjct: 205 KVMVTIFGRETPVELDFSQVV 182

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL
Match: A0A0A0KZV1 (NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.3e-177
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLVDLDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL
Match: A0A1S3BKU2 (transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 GN=LOC103490936 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.9e-168
Identity = 310/326 (95.09%), Postives = 316/326 (96.93%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MA GLL+WS +SLCSTS PALSFSLSSSRRTQLS+SASVETPAAAADD QQLS R+RRKL
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLCRKPKKEFA WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSVKEKRKLKNGTYTV PKAVFPGSVFIRCVMNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQAFLEKEQEEA
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN+SALKTDLDTNGTTATKHKGR KKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLVDLDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVETK 326

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL
Match: A0A6J1DDH4 (uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019492 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 9.0e-155
Identity = 289/325 (88.92%), Postives = 307/325 (94.46%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+L
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVET 326
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIVVET 323

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL
Match: A0A6J1EV13 (uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC111438223 PE=4 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 6.4e-153
Identity = 284/326 (87.12%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MACGLL W+++ L S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+L
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDYLAKLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEKE+E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+TDLDTNGTTATKHKGRPKKAVNTLSPGSTVRV+SGTFAEFEGSLKK+NRKS K
Sbjct: 241 PNPSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLV+LDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVELDIGDIIVETK 322

[Close]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL
Match: A0A6J1HQX6 (uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 9.3e-152
Identity = 283/326 (86.81%), Postives = 304/326 (93.25%), Query Frame = 0


Query: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60
           MAC LL W+++SL S SFP+LSFSLSSS RTQLS+SA++ET   AADD  QLS RERR+L
Sbjct: 1   MACRLLTWTTLSLRSPSFPSLSFSLSSSLRTQLSISAALET---AADDVLQLSARERRRL 60

Query: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120
           RNERRE K TTNWREEVEERLC+KPKKEFANWTEKLNLDYL+KLGPQWWVMRV+RVR QE
Sbjct: 61  RNERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLSKLGPQWWVMRVSRVRGQE 120

Query: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV EKRKLKNG+YTV PKAVFPGSVFIRC+MNKE+HD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAK+EQERHDQAFLEK++E+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKQKEQA 240

Query: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN S L+T LDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKK+NRKSGK
Sbjct: 241 PNPSVLETGLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIIVETK 327
           VTVGFTLFGKETLV LDIGDIIVETK
Sbjct: 301 VTVGFTLFGKETLVVLDIGDIIVETK 322

[Close]

BLAST of CsaV3_4G025900 vs. TAIR 10
Match: AT3G09210.1 (plastid transcriptionally active 13 )

HSP 1 Score: 323.6 bits (828), Expect = 1.9e-88
Identity = 179/341 (52.49%), Postives = 238/341 (69.79%), Query Frame = 0


Query: 4   GLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKLRNE 63
           GLL WS  SL  + +  ++       +TQ S++A V       +   QL+ +ERR+LRNE
Sbjct: 7   GLLQWSRSSLIPSIYTPIN-------KTQFSIAACV------IERNHQLTAKERRQLRNE 66

Query: 64  RREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQEIVE 123
           RRE K   +WREEVEE+L +KPKK +A WTE+LNLD LA+ GPQWW +RV+R+R  E  +
Sbjct: 67  RRESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQ 126

Query: 124 RLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHDFIR 183
            LAR LAR +P+++F +Y PSV+ KRKLKNG+ +V PK VFPG +FIRC++NKEIHD IR
Sbjct: 127 ILARALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIR 186

Query: 184 ECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLE--KEQEEA- 243
           + DGVGGF+G+KVGNTKRQINKP+PV ++D+EAIFK+AK+ QE+ D  F E  + +EEA 
Sbjct: 187 DVDGVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEAS 246

Query: 244 ----------PNTSALKTDLDT-------NGTTATKHKGRPKKAVNTLSPGSTVRVASGT 303
                      N+  ++T  ++         T AT+ K + KK    L+ GSTVRV SGT
Sbjct: 247 ILASQELLALSNSDVIETVAESKPKRAPRKATLATETKAKKKK----LAAGSTVRVLSGT 306

Query: 304 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIIVE 325
           FAEF G+LKKLNRK+ K TVGFTLFGKETLV++DI +++ E
Sbjct: 307 FAEFVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330

The following BLAST results are available for this feature:

BLAST of CsaV3_4G025900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147896.1	2.7e-177	100.00	uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical ...	[more]
XP_008448915.1	3.9e-168	95.09	PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]...	[more]
XP_038880828.1	7.0e-162	91.41	transcription termination/antitermination protein NusG isoform X1 [Benincasa his...	[more]
XP_022151589.1	1.9e-154	88.92	uncharacterized protein LOC111019492 [Momordica charantia]	[more]
XP_022931956.1	1.3e-152	87.12	uncharacterized protein LOC111438223 [Cucurbita moschata]	[more]

BLAST of CsaV3_4G025900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q06795	1.0e-09	26.05	Transcription termination/antitermination protein NusG OS=Bacillus subtilis (str...	[more]
Q9HWC4	6.5e-09	20.18	Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa...	[more]
P65591	8.5e-09	22.02	Transcription termination/antitermination protein NusG OS=Neisseria meningitidis...	[more]
P65592	8.5e-09	22.02	Transcription termination/antitermination protein NusG OS=Neisseria meningitidis...	[more]
P35872	8.5e-09	26.37	Transcription termination/antitermination protein NusG OS=Thermus thermophilus (...	[more]

BLAST of CsaV3_4G025900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZV1	1.3e-177	100.00	NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV...	[more]
A0A1S3BKU2	1.9e-168	95.09	transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 G...	[more]
A0A6J1DDH4	9.0e-155	88.92	uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1EV13	6.4e-153	87.12	uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC1114382...	[more]
A0A6J1HQX6	9.3e-152	86.81	uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889...	[more]

BLAST of CsaV3_4G025900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09210.1	1.9e-88	52.49	plastid transcriptionally active 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..257
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..272
None	No IPR available	PANTHER	PTHR30265:SF4	TRANSCRIPTION ANTITERMINATION PROTEIN RFAH	coord: 33..323
None	No IPR available	CDD	cd06091	KOW_NusG	coord: 271..321 e-value: 1.6205E-12 score: 59.3932
None	No IPR available	CDD	cd09890	NGN_plant	coord: 107..218 e-value: 3.69636E-45 score: 147.885
IPR006645	NusG, N-terminal	SMART	SM00738	nusgn_4	coord: 105..221 e-value: 2.3E-20 score: 83.7
IPR006645	NusG, N-terminal	PFAM	PF02357	NusG	coord: 107..217 e-value: 1.7E-10 score: 41.3
IPR036735	NusG, N-terminal domain superfamily	GENE3D	3.30.70.940		coord: 106..222 e-value: 1.9E-18 score: 68.5
IPR036735	NusG, N-terminal domain superfamily	SUPERFAMILY	82679	N-utilization substance G protein NusG, N-terminal domain	coord: 106..223
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 269..322 e-value: 3.2E-12 score: 48.2
IPR043425	NusG-like	PANTHER	PTHR30265	RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG	coord: 33..323
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 271..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G025900.1	CsaV3_4G025900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated