CsaV3_4G025720 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G025720
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Copper transporter
Location	chr4: 15119969 .. 15121217 (+)
RNA-Seq Expression	CsaV3_4G025720
Synteny	CsaV3_4G025720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACAAAACAAAACAAAACAAAAAAGAGAGAGAGATTAGTGTGATTTAAAGAGCCATAAAGTAGCTGAGTTTGTAAATGAAAAGCACAAGGTTCTGTTTTATATATAATATATTCTCCTTCAGTTTCATAACTTGCTACTGAAGAAAGTTGAGAACCAAACAAACACTAAAAACAAACACCATTGATCTTTGGCGGACAACCTAATGACTTATTCTTTAGTTAATTACATCATTAATTATTAAACTGCTGCTAATTAATCATATCAAGTTTGGGTTAGCCTTGTTTTTTTTATCTCCATTGTTAAATACACGTAACAAGCAGCCAAATCCCAGATCATTATTCCTTCTCCTTCTCTCTTCCTCAGGTTAAAGTTTAGACATGGACTCTATGCCCAATATGTCTCCTCCGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCAACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCCTTGCTAGCGCTTCCGTACAGGCGTTCGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAGTTTGATTGCAGATCGAGCTCTCTTTTTTTCCAATCTTTTGGATACTTTTGAACTGCTTGTTTTTCATTTCCTTGATGGTGATTGTAATGAGAAAAGCTTTCTTATTACCAATATCTTCGCCCGAGAAGATGGGGTTTTGTTGAGTGTTTGGTTTCCTTATGTGTATGTGTTAATCGTAAGTTTGTAAATGAAATGTGCTCAAAAGCGAAGGGGCTTATGAGGTTAACAATATTTAAAAGAGATAACAAGGGGAAAATAAATTAAAGGGTAAGACAGGGTTGGAGTTTATAAAATCGATGTGTTTGTATTTAAGCATATATACATTTGATTCCATCACTCCATGTATGGTTGGAAAAAAAATCGAATGAAATCTTGATAGCATTAAATGTTAATTGAGTTAAAGTTGTTGCTGATAATTTTA

mRNA sequence

ATGGACTCTATGCCCAATATGTCTCCTCCGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCAACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCCTTGCTAGCGCTTCCGTACAGGCGTTCGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAGTTTGA

Coding sequence (CDS)

ATGGACTCTATGCCCAATATGTCTCCTCCGAATGGCAACACCAGCATGAACAACTCAACTGGTGATTCTCCAATCATGTCAACGAAGATGATGAATATGCAGATGAGCTTCTACTGGGGGAAAGATGCTGTGATTCTATTTCCAAGGTGGCCTAAAGAGAGCCTTGGCCTATACATATTAGCCTTCTTCTTCATCTTCCTGCTGGCCTTTGCTGTCGAGTTCTTGAGCCACACGCCGCCAAACAAGCTCGGTAAGAGCCCCCTTGCTAGCGCTTCCGTACAGGCGTTCGTGTATGCTTTCAGGACAGGGTTGGCTTATCTAGTCATGTTGGCTGTTATGTCTTTCAACATTGGGATCTTTATAGCGGCTGTGGCAGGCCACACTCTCGGATTTTTTGTAGTCAAACTTCGTGTTCTTACTGCTGCAAAGAGGACTGATTCTAATGAAGTTTGA

Protein sequence

MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV*

Homology

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BLAST of CsaV3_4G025720 vs. NCBI nr
Match: XP_011653663.1 (copper transporter 2 [Cucumis sativus] >XP_031740552.1 copper transporter 2 [Cucumis sativus] >KGN54324.1 hypothetical protein Csa_018091 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60
           MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL
Sbjct: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60

Query: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120
           AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF
Sbjct: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120

Query: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV
Sbjct: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

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BLAST of CsaV3_4G025720 vs. NCBI nr
Match: XP_016900457.1 (PREDICTED: copper transporter 2-like [Cucumis melo] >KAA0045106.1 copper transporter 2-like [Cucumis melo var. makuwa] >TYJ96222.1 copper transporter 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.3e-64
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PP  NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSP+A AS+QAF+YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNEV
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of CsaV3_4G025720 vs. NCBI nr
Match: XP_038883235.1 (copper transporter 2-like [Benincasa hispida])

HSP 1 Score: 231.9 bits (590), Expect = 3.7e-57
Identity = 126/153 (82.35%), Postives = 135/153 (88.24%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMS-TKMMNMQMSFYWGKDAVILFPRWPKESLGL 60
           M+SMP MSPP  +GNTSMNNS GDSP+M+     NMQMSFYWGKDAV+LF  WPKESLGL
Sbjct: 1   MESMP-MSPPAMDGNTSMNNSIGDSPMMTPMTTTNMQMSFYWGKDAVVLFSGWPKESLGL 60

Query: 61  YILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNI 120
           YILAFFFIFLLAFAVEFLSHTPPNKL KSP+ASAS+QA VYAFRT L YLVMLAVMSFN+
Sbjct: 61  YILAFFFIFLLAFAVEFLSHTPPNKLSKSPIASASIQAVVYAFRTSLVYLVMLAVMSFNV 120

Query: 121 GIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           GIFIAAVAGHTLGFFVVK+R LT AK TDSNEV
Sbjct: 121 GIFIAAVAGHTLGFFVVKVRALTVAKGTDSNEV 152

[Close]

BLAST of CsaV3_4G025720 vs. NCBI nr
Match: XP_022151475.1 (copper transporter 6-like [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 6.5e-54
Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSM +MSPP  +GNTS NNSTG++  M+     MQMSFYWGKDAV+LF  WPKESLG+Y
Sbjct: 76  MDSM-DMSPPAMDGNTSTNNSTGNNMTMTMMTTKMQMSFYWGKDAVVLFSGWPKESLGMY 135

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAF VEFLSHTPPNKLGKSP+  AS+QA +YAFRTGLAYLVMLAVMSFN+G
Sbjct: 136 ILAFFFIFLLAFTVEFLSHTPPNKLGKSPVVGASIQAVIYAFRTGLAYLVMLAVMSFNVG 195

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IFIAAVAGHTLGFFVV++  LT  KRTDS EV
Sbjct: 196 IFIAAVAGHTLGFFVVEVHALTVEKRTDSTEV 226

[Close]

BLAST of CsaV3_4G025720 vs. NCBI nr
Match: XP_022950132.1 (copper transporter 2-like [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 3.8e-46
Identity = 107/150 (71.33%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60
           M+SMP MSPP    +M+    D+P+       MQMSFYWGKDAV+LF  WPK+S+G+YIL
Sbjct: 1   MESMP-MSPP----AMDGR--DTPM-------MQMSFYWGKDAVVLFSEWPKQSVGMYIL 60

Query: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120
           AFFFIFLLAFA+EFLSHT P KL KSP+ SAS+QA VYAFRTGLAYLVMLAVMSFN+G+F
Sbjct: 61  AFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMF 120

Query: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IAAVAGH+LG+FVVKLR LTA KR+D NEV
Sbjct: 121 IAAVAGHSLGYFVVKLRALTAGKRSDCNEV 136

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BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot
Match: Q9STG2 (Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 9.0e-22
Identity = 62/134 (46.27%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 2   DSMPNMSPPN-GNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 61
           D M +M PP+  ++SM+N T      +  MM M M+F+WGK+  +LF  WP  S G+Y L
Sbjct: 4   DHMHDMPPPSPSSSSMSNHT------TPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYAL 63

Query: 62  AFFFIFLLAFAVEFLSHTPPNKL-GKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGI 121
               IFLLA   E+L+H+P  ++ G +  A+   Q  VY  +TGL+YLVMLAVMSFN G+
Sbjct: 64  CLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGV 123

Query: 122 FIAAVAGHTLGFFV 134
           FI A+AG+ +GFF+
Sbjct: 124 FIVAIAGYGVGFFL 131

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BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot
Match: Q8GWP3 (Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-21
Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 9   PPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLL 68
           PP+  +SM N T  + IM      M M+F+WGK+  ILF  WP  SLG+Y+L    +FLL
Sbjct: 7   PPSSPSSMVNHTNSNMIM------MHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLL 66

Query: 69  AFAVEFLSHTPPNK-LGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGH 128
           A  VE+L+H+   +  G +  A   VQ  VY  +TGLAYLVMLAVMSFN G+FI A+AG 
Sbjct: 67  AVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGF 126

Query: 129 TLGFFV 134
            +GF +
Sbjct: 127 AVGFML 126

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BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot
Match: Q39065 (Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 13  NTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAV 72
           N SMN   G   +   KMM M M+F+WGK+  +LF  WP  S G+Y L   F+F LA   
Sbjct: 26  NGSMNEGGGHHHM---KMM-MHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLT 85

Query: 73  EFLSHTP--PNKLGKSP-LASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTL 132
           E+L+H+       G S   A+  +Q  VY  R GLAYLVMLAVMSFN G+F+ A+AGH +
Sbjct: 86  EWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAV 145

Query: 133 GFFV 134
           GF +
Sbjct: 146 GFML 145

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BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot
Match: Q5ZD08 (Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-17
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 33  MQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPLAS-- 92
           M M+FYWGK++ ILF  WP  S G+Y LA   +F LA  +EFL    P     S L S  
Sbjct: 28  MHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLG--SPRVQESSSLGSRR 87

Query: 93  -ASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVK 136
             +  A V+A R GLAYL+MLA+MSFN+G+ +AAVAGH  GF   +
Sbjct: 88  RRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAFR 131

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot
Match: Q9FGU8 (Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.5e-16
Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 33  MQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASAS 92
           M M+F+WGK   +LF  WP  SL +Y +    IF+++   E LS     K G + L    
Sbjct: 30  MHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGL 89

Query: 93  VQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LGF +   R   A       EV
Sbjct: 90  LQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEV 147

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL
Match: A0A0A0KZS9 (Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_4G303720 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60
           MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL
Sbjct: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60

Query: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120
           AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF
Sbjct: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120

Query: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV
Sbjct: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 150

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL
Match: A0A5A7TSJ7 (Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00100 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PP  NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSP+A AS+QAF+YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNEV
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL
Match: A0A1S4DWU9 (Copper transporter OS=Cucumis melo OX=3656 GN=LOC103490782 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.6e-64
Identity = 136/152 (89.47%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSMP M PP  NGNTSMNNSTGDSP MST MMNMQM+FYWGK+ VILFP WPKESL LY
Sbjct: 1   MDSMP-MPPPAMNGNTSMNNSTGDSPNMSTTMMNMQMTFYWGKEVVILFPGWPKESLALY 60

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAFAVEFLSHTPPNKLGKSP+A AS+QAF+YAFRTGLAYLVMLAVMSFNIG
Sbjct: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPVAIASLQAFIYAFRTGLAYLVMLAVMSFNIG 120

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IFIAAVAGHTLGFFVVKLRVLT AKRTDSNEV
Sbjct: 121 IFIAAVAGHTLGFFVVKLRVLTVAKRTDSNEV 151

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL
Match: A0A6J1DB95 (Copper transporter OS=Momordica charantia OX=3673 GN=LOC111019407 PE=3 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 3.2e-54
Identity = 117/152 (76.97%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 1   MDSMPNMSPP--NGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLY 60
           MDSM +MSPP  +GNTS NNSTG++  M+     MQMSFYWGKDAV+LF  WPKESLG+Y
Sbjct: 76  MDSM-DMSPPAMDGNTSTNNSTGNNMTMTMMTTKMQMSFYWGKDAVVLFSGWPKESLGMY 135

Query: 61  ILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIG 120
           ILAFFFIFLLAF VEFLSHTPPNKLGKSP+  AS+QA +YAFRTGLAYLVMLAVMSFN+G
Sbjct: 136 ILAFFFIFLLAFTVEFLSHTPPNKLGKSPVVGASIQAVIYAFRTGLAYLVMLAVMSFNVG 195

Query: 121 IFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IFIAAVAGHTLGFFVV++  LT  KRTDS EV
Sbjct: 196 IFIAAVAGHTLGFFVVEVHALTVEKRTDSTEV 226

[Close]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL
Match: A0A6J1GDY7 (Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111453311 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46
Identity = 107/150 (71.33%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MDSMPNMSPPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 60
           M+SMP MSPP    +M+    D+P+       MQMSFYWGKDAV+LF  WPK+S+G+YIL
Sbjct: 1   MESMP-MSPP----AMDGR--DTPM-------MQMSFYWGKDAVVLFSEWPKQSVGMYIL 60

Query: 61  AFFFIFLLAFAVEFLSHTPPNKLGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIF 120
           AFFFIFLLAFA+EFLSHT P KL KSP+ SAS+QA VYAFRTGLAYLVMLAVMSFN+G+F
Sbjct: 61  AFFFIFLLAFAIEFLSHTQPTKLPKSPVGSASIQALVYAFRTGLAYLVMLAVMSFNVGMF 120

Query: 121 IAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           IAAVAGH+LG+FVVKLR LTA KR+D NEV
Sbjct: 121 IAAVAGHSLGYFVVKLRALTAGKRSDCNEV 136

[Close]

BLAST of CsaV3_4G025720 vs. TAIR 10
Match: AT3G46900.1 (copper transporter 2 )

HSP 1 Score: 104.8 bits (260), Expect = 6.4e-23
Identity = 62/134 (46.27%), Postives = 87/134 (64.93%), Query Frame = 0


Query: 2   DSMPNMSPPN-GNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYIL 61
           D M +M PP+  ++SM+N T      +  MM M M+F+WGK+  +LF  WP  S G+Y L
Sbjct: 4   DHMHDMPPPSPSSSSMSNHT------TPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYAL 63

Query: 62  AFFFIFLLAFAVEFLSHTPPNKL-GKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGI 121
               IFLLA   E+L+H+P  ++ G +  A+   Q  VY  +TGL+YLVMLAVMSFN G+
Sbjct: 64  CLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGV 123

Query: 122 FIAAVAGHTLGFFV 134
           FI A+AG+ +GFF+
Sbjct: 124 FIVAIAGYGVGFFL 131

[Close]

BLAST of CsaV3_4G025720 vs. TAIR 10
Match: AT2G26975.1 (Ctr copper transporter family )

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-22
Identity = 61/126 (48.41%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 9   PPNGNTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLL 68
           PP+  +SM N T  + IM      M M+F+WGK+  ILF  WP  SLG+Y+L    +FLL
Sbjct: 7   PPSSPSSMVNHTNSNMIM------MHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLL 66

Query: 69  AFAVEFLSHTPPNK-LGKSPLASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGH 128
           A  VE+L+H+   +  G +  A   VQ  VY  +TGLAYLVMLAVMSFN G+FI A+AG 
Sbjct: 67  AVIVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGF 126

Query: 129 TLGFFV 134
            +GF +
Sbjct: 127 AVGFML 126

[Close]

BLAST of CsaV3_4G025720 vs. TAIR 10
Match: AT5G59030.1 (copper transporter 1 )

HSP 1 Score: 94.4 bits (233), Expect = 8.6e-20
Identity = 58/124 (46.77%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 13  NTSMNNSTGDSPIMSTKMMNMQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAV 72
           N SMN   G   +   KMM M M+F+WGK+  +LF  WP  S G+Y L   F+F LA   
Sbjct: 26  NGSMNEGGGHHHM---KMM-MHMTFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLT 85

Query: 73  EFLSHTP--PNKLGKSP-LASASVQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTL 132
           E+L+H+       G S   A+  +Q  VY  R GLAYLVMLAVMSFN G+F+ A+AGH +
Sbjct: 86  EWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAV 145

Query: 133 GFFV 134
           GF +
Sbjct: 146 GFML 145

[Close]

BLAST of CsaV3_4G025720 vs. TAIR 10
Match: AT5G59040.1 (copper transporter 3 )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 50/118 (42.37%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 33  MQMSFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFLSHTPPNKLGKSPLASAS 92
           M M+F+WGK   +LF  WP  SL +Y +    IF+++   E LS     K G + L    
Sbjct: 30  MHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSGPASLGGGL 89

Query: 93  VQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLRVLTAAKRTDSNEV 151
           +Q  VY  R  L+YLVMLAVMSFN G+F+AA+AG  LGF +   R   A       EV
Sbjct: 90  LQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSRAFRATSSNSHTEV 147

[Close]

BLAST of CsaV3_4G025720 vs. TAIR 10
Match: AT2G37925.1 (copper transporter 4 )

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 36  SFYWGKDAVILFPRWPKESLGLYILAFFFIFLLAFAVEFL---SHTPPNKLGKSPLASAS 95
           +FYWG +  +LF  WP    G+Y LA  F+F LAF  E+L   S     K G   LA  +
Sbjct: 33  TFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARCSDASSIKQGADKLAKVA 92

Query: 96  VQAFVYAFRTGLAYLVMLAVMSFNIGIFIAAVAGHTLGFFVVKLR 138
            +  +Y  ++G +YLV+LAV+SFN G+F+AA+ GH LGF V + R
Sbjct: 93  FRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFRGR 137

The following BLAST results are available for this feature:

BLAST of CsaV3_4G025720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653663.1	2.6e-74	100.00	copper transporter 2 [Cucumis sativus] >XP_031740552.1 copper transporter 2 [Cuc...	[more]
XP_016900457.1	5.3e-64	89.47	PREDICTED: copper transporter 2-like [Cucumis melo] >KAA0045106.1 copper transpo...	[more]
XP_038883235.1	3.7e-57	82.35	copper transporter 2-like [Benincasa hispida]	[more]
XP_022151475.1	6.5e-54	76.97	copper transporter 6-like [Momordica charantia]	[more]
XP_022950132.1	3.8e-46	71.33	copper transporter 2-like [Cucurbita moschata]	[more]

BLAST of CsaV3_4G025720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STG2	9.0e-22	46.27	Copper transporter 2 OS=Arabidopsis thaliana OX=3702 GN=COPT2 PE=2 SV=1	[more]
Q8GWP3	2.0e-21	48.41	Copper transporter 6 OS=Arabidopsis thaliana OX=3702 GN=COPT6 PE=2 SV=1	[more]
Q39065	1.2e-18	46.77	Copper transporter 1 OS=Arabidopsis thaliana OX=3702 GN=COPT1 PE=2 SV=2	[more]
Q5ZD08	6.6e-17	49.06	Copper transporter 3 OS=Oryza sativa subsp. japonica OX=39947 GN=COPT3 PE=2 SV=1	[more]
Q9FGU8	1.5e-16	42.37	Copper transporter 3 OS=Arabidopsis thaliana OX=3702 GN=COPT3 PE=2 SV=1	[more]

BLAST of CsaV3_4G025720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZS9	1.2e-74	100.00	Copper transporter OS=Cucumis sativus OX=3659 GN=Csa_4G303720 PE=3 SV=1	[more]
A0A5A7TSJ7	2.6e-64	89.47	Copper transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209...	[more]
A0A1S4DWU9	2.6e-64	89.47	Copper transporter OS=Cucumis melo OX=3656 GN=LOC103490782 PE=3 SV=1	[more]
A0A6J1DB95	3.2e-54	76.97	Copper transporter OS=Momordica charantia OX=3673 GN=LOC111019407 PE=3 SV=1	[more]
A0A6J1GDY7	1.9e-46	71.33	Copper transporter OS=Cucurbita moschata OX=3662 GN=LOC111453311 PE=3 SV=1	[more]

BLAST of CsaV3_4G025720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46900.1	6.4e-23	46.27	copper transporter 2	[more]
AT2G26975.1	1.4e-22	48.41	Ctr copper transporter family	[more]
AT5G59030.1	8.6e-20	46.77	copper transporter 1	[more]
AT5G59040.1	1.1e-17	42.37	copper transporter 3	[more]
AT2G37925.1	2.3e-17	43.81	copper transporter 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 90..133 e-value: 2.8E-10 score: 40.9 coord: 35..76 e-value: 4.3E-6 score: 27.4
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 12..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR12483:SF85	CTR FAMILY COPPER TRANSPORTER	coord: 12..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G025720.1	CsaV3_4G025720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity