CsaV3_4G025510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G025510
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 14988570 .. 14989009 (-)
RNA-Seq ExpressionCsaV3_4G025510
SyntenyCsaV3_4G025510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACCACGATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACGGATTGGGCCTGTATTGCAGGTACATATTGCCATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGGTAGCCTTAACGAGGTTTTGATAGCGTATGAAATATCGCTATTCATTTTCGCTTAATTCGATTTCCATACGTGATTTTATGATATTACTTGATTTGTGTAATAGATTTTGAGCAATTCGTGGTATAATTTGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

mRNA sequence

ATGAACACCACGATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACGGATTGGGCCTGTATTGCAGGTACATATTGCCATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGGTAGCCTTAACGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

Coding sequence (CDS)

ATGAACACCACGATGGCGAGATTACTCATATCTCAAGTGGAAACTGTTTTCGAAATTGAGGGTGACGATGAGAGACAACGGATTGGGCCTGTATTGCAGGTACATATTGCCATCGATATAACTAAACCTCTTTGTCAAGGTGTTTGCATTCAGGTTGGTAGCCTTAACGAGATTGATGTCATTTTGGAACTAATTTGGGCCATTACAGAGTCATACGACTCAACCAAGACAAACCAGAGTAAACTGAAGCGTTGGGAAGTGCAAAAGGCTTTTTGCCTTGTAGCTTTGGGACGCCTCACGGAGCCTCGCGTGGCGTTGTAA

Protein sequence

MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDVILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL*
Homology
[Close]
BLAST of CsaV3_4G025510 vs. NCBI nr
Match: KGN54302.1 (hypothetical protein Csa_017874 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV 60
           MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV
Sbjct: 1   MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV 60

Query: 61  ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 107
           ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 61  ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

[Close]
BLAST of CsaV3_4G025510 vs. ExPASy TrEMBL
Match: A0A0A0L133 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297520 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV 60
           MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV
Sbjct: 1   MNTTMARLLISQVETVFEIEGDDERQRIGPVLQVHIAIDITKPLCQGVCIQVGSLNEIDV 60

Query: 61  ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 107
           ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL
Sbjct: 61  ILELIWAITESYDSTKTNQSKLKRWEVQKAFCLVALGRLTEPRVAL 106

The following BLAST results are available for this feature:
BLAST of CsaV3_4G025510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54302.13.7e-51100.00hypothetical protein Csa_017874 [Cucumis sativus][more]
BLAST of CsaV3_4G025510 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G025510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1331.8e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G297520 PE=4 SV=1[more]
BLAST of CsaV3_4G025510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G025510.1CsaV3_4G025510.1mRNA