CsaV3_4G025390 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAATTGCTCCTCTAATTAAAACTTTAAAATATATAAATTGTCACATCAATTTAAGGGAACGAAGTTATGAATAGTATCAATATATAATTGTGTTTTTACAAATTTTATGATGTATAAAATATTGCTCACTATAACACAACACGACTAACCCAAGAGCTCCATTTTTCTCTCTTTTTTCTTTTCTACTCATCACGGAGAGAAATGGCTCTGACAACAATGAATCTCCCCAACGACGACGACTACTCCCATAGACTCTCCTCCTTCCTCCACCACCACCCGCTTACTCACAATATGATTCGCAACCCCCACCATCCGTACTCTCGAACTCACCTGAGTTGTGACGTTTGCCGTGAAACCATCCACAGCAGTTTCTACCAATGCAAAGACTGCCACTTCTATGTTCACTCATTTTGCACTCGCCTTCCCAACAGCCTCCGCCACGTCAAAGACCCCGACCATAAGCTCCGCCTCTACAGGCTCCCATATGGCCGTTGTTCTATTTGCAAAGCTAAATTTTCTTCTCTCTGGGTTTATGGCTGCAACGTTTGTAATGTCAATATCCATATCAATTGCCTTCAAACATCGACAGCAGCCTCCTCGACTTCACGTTCACGTGGGATACACCACCATGCGCCTCCACCCTGGGCGATGGGGCCACCATCCCAACCTGATCATTTTCATGGTTGGGGATATCCTCCGGATTACAATAATCATGTTCAGTTTGGATACAACAACAATAATAATCATCAATATCCTCATCAGATGAATCATGGTAACTTGGGATCGGTGTTTGGGGGTACAATGTATTCTCTTGTTCAGAGTTTGATATTTGGTGCTCTCAATGATTTTATTTTCGGTTAATCCATTGGTTTTTAATTAATTTTGCTTTTAGTTTGTAATGGTCAGTGTTTTCAATTCTTCATTGTTTCCCTGTTCAGTAATTCTCTTCCCCCTCTCTCTTTTTCCCTTTCATTGTAGAATTCTAGTGTTTGAGGTTGTTTAAATTAATTGAGCTTTTTTCTTTAATATATATGCGTTTAAAGTTGGAGGTCAAGTATTTTATGCATTGTTTTTTCCTACCAAATTTTATACAATGGTTTTCACGTTTCTTGAATATAGATGAATTTTTATTCCAAGTATAAACACGGCTGAAGTTTTACAGAAAAGACTCCCAAATTGGGTTTTACATCCATCTTGGTGTGCTCTTTGCAAGAAAAATGAAGAAAACAGAAATCATCTATTCTGCATCTGTCCATACAGCAAAGACATTTGGGATAAGGTTGAAACTCTTCTAAATCATCTAACACAACTTTGATAACACTGCTCTCCTATGCAAATACATTTGCAGAAACAGACCCAAGTCCAAAAAACAAATCATCCACTTAAACATGGCGGTCGTCACCCTCTGGTCTTTATGGTT ATGGCTCTGACAACAATGAATCTCCCCAACGACGACGACTACTCCCATAGACTCTCCTCCTTCCTCCACCACCACCCGCTTACTCACAATATGATTCGCAACCCCCACCATCCGTACTCTCGAACTCACCTGAGTTGTGACGTTTGCCGTGAAACCATCCACAGCAGTTTCTACCAATGCAAAGACTGCCACTTCTATGTTCACTCATTTTGCACTCGCCTTCCCAACAGCCTCCGCCACGTCAAAGACCCCGACCATAAGCTCCGCCTCTACAGGCTCCCATATGGCCGTTGTTCTATTTGCAAAGCTAAATTTTCTTCTCTCTGGGTTTATGGCTGCAACGTTTGTAATGTCAATATCCATATCAATTGCCTTCAAACATCGACAGCAGCCTCCTCGACTTCACGTTCACGTGGGATACACCACCATGCGCCTCCACCCTGGGCGATGGGGCCACCATCCCAACCTGATCATTTTCATGGTTGGGGATATCCTCCGGATTACAATAATCATGTTCAGTTTGGATACAACAACAATAATAATCATCAATATCCTCATCAGATGAATCATGGTAACTTGGGATCGGTGTTTGGGGGTACAATGTATTCTCTTGTTCAGAGTTTGATATTTGGTGCTCTCAATGATTTTATTTTCGGTTAA ATGGCTCTGACAACAATGAATCTCCCCAACGACGACGACTACTCCCATAGACTCTCCTCCTTCCTCCACCACCACCCGCTTACTCACAATATGATTCGCAACCCCCACCATCCGTACTCTCGAACTCACCTGAGTTGTGACGTTTGCCGTGAAACCATCCACAGCAGTTTCTACCAATGCAAAGACTGCCACTTCTATGTTCACTCATTTTGCACTCGCCTTCCCAACAGCCTCCGCCACGTCAAAGACCCCGACCATAAGCTCCGCCTCTACAGGCTCCCATATGGCCGTTGTTCTATTTGCAAAGCTAAATTTTCTTCTCTCTGGGTTTATGGCTGCAACGTTTGTAATGTCAATATCCATATCAATTGCCTTCAAACATCGACAGCAGCCTCCTCGACTTCACGTTCACGTGGGATACACCACCATGCGCCTCCACCCTGGGCGATGGGGCCACCATCCCAACCTGATCATTTTCATGGTTGGGGATATCCTCCGGATTACAATAATCATGTTCAGTTTGGATACAACAACAATAATAATCATCAATATCCTCATCAGATGAATCATGGTAACTTGGGATCGGTGTTTGGGGGTACAATGTATTCTCTTGTTCAGAGTTTGATATTTGGTGCTCTCAATGATTTTATTTTCGGTTAA MALTTMNLPNDDDYSHRLSSFLHHHPLTHNMIRNPHHPYSRTHLSCDVCRETIHSSFYQCKDCHFYVHSFCTRLPNSLRHVKDPDHKLRLYRLPYGRCSICKAKFSSLWVYGCNVCNVNIHINCLQTSTAASSTSRSRGIHHHAPPPWAMGPPSQPDHFHGWGYPPDYNNHVQFGYNNNNNHQYPHQMNHGNLGSVFGGTMYSLVQSLIFGALNDFIFG* Homology
BLAST of CsaV3_4G025390 vs. NCBI nr
Match: XP_004142191.1 (uncharacterized protein LOC101202768 [Cucumis sativus] >KGN54289.1 hypothetical protein Csa_017879 [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 9.6e-131 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. NCBI nr
Match: XP_008448306.1 (PREDICTED: uncharacterized protein LOC103490537 [Cucumis melo] >KAA0045162.1 diacylglycerol kinase theta-like [Cucumis melo var. makuwa] >TYK23576.1 diacylglycerol kinase theta-like [Cucumis melo var. makuwa]) HSP 1 Score: 330.5 bits (846), Expect = 1.1e-86 Identity = 169/218 (77.52%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. NCBI nr
Match: XP_038882330.1 (uncharacterized protein LOC120073579 [Benincasa hispida]) HSP 1 Score: 265.8 bits (678), Expect = 3.4e-67 Identity = 141/215 (65.58%), Postives = 160/215 (74.42%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. NCBI nr
Match: XP_004142193.1 (uncharacterized protein LOC101203241 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 5.4e-65 Identity = 139/222 (62.61%), Postives = 152/222 (68.47%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. NCBI nr
Match: KAE8649546.1 (hypothetical protein Csa_018019 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 5.4e-65 Identity = 139/222 (62.61%), Postives = 152/222 (68.47%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. ExPASy TrEMBL
Match: A0A0A0KZP4 (C1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296910 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 4.7e-131 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. ExPASy TrEMBL
Match: A0A5A7TP67 (Diacylglycerol kinase theta-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00840 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 5.4e-87 Identity = 169/218 (77.52%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. ExPASy TrEMBL
Match: A0A1S3BK06 (uncharacterized protein LOC103490537 OS=Cucumis melo OX=3656 GN=LOC103490537 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 5.4e-87 Identity = 169/218 (77.52%), Postives = 175/218 (80.28%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. ExPASy TrEMBL
Match: A0A0A0L116 (C1_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296890 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 2.6e-65 Identity = 139/222 (62.61%), Postives = 152/222 (68.47%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. ExPASy TrEMBL
Match: A0A5D3DJ37 (Diacylglycerol kinase theta-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00800 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 4.9e-64 Identity = 133/217 (61.29%), Postives = 152/217 (70.05%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. TAIR 10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 84.7 bits (208), Expect = 9.9e-17 Identity = 67/225 (29.78%), Postives = 98/225 (43.56%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. TAIR 10
Match: AT2G37780.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07 Identity = 53/187 (28.34%), Postives = 78/187 (41.71%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. TAIR 10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06 Identity = 38/144 (26.39%), Postives = 57/144 (39.58%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. TAIR 10
Match: AT4G01350.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 50.1 bits (118), Expect = 2.7e-06 Identity = 35/130 (26.92%), Postives = 53/130 (40.77%), Query Frame = 0
BLAST of CsaV3_4G025390 vs. TAIR 10
Match: AT2G44400.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06 Identity = 32/104 (30.77%), Postives = 46/104 (44.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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