CsaV3_4G025090 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTCACTTTCTCCTCCTCCTTCTCCTTCTAACTTAATTATATCTAAGCTCTTTAATTTCTTCTTCCTCTCAAATCCTTTCTTTTCTTTTTCCTCTGTCCTCATTTTTTTCAAGTGGGGAACATTTTCTCAGTTCATTCACCACCAAGAAAAATATAAAAATGGAATATGATAAGTGTTACAGATCAAAGGCACAAATTCCAAATTTTGATTGTCTTCTCTTTGGTAAGTTTGATATGTTTAATACTTTGTTGTTCTACTGATACTTACTTGTACGTGCTCGATCATTCTCTAACCGAGCTTTGCTTGGGAAGAATTATGGAGTGAAAAAAATGTTGATTAGTCCTCACCCATAACCCACTAATGAAAGAAGATAAAAGGATAAAATCATTCCATTTCGAGTTTCGAGTTCTTTATAATCTGACTCGAAAAACTTGTAATGCAAGGTCCGCATTGGAGTAGATTTTCTACCCCTTTTTCTTTCATCATTTTGATAACATTCATTGAAATGGATAGAATTTTAAATAAATTTGTATTTAAAAATCTTGCAGATCTTGATGACACTCTGTATCCTCTAAGCTCTGGCTTAGCAACAGCTTGCAAAAACAACATACATGGTGACTTTTCTGTCTCATATATATGTATGTATATATTTCTTTTTTCATTTTCTCATAAGAAATATGGTTTTTTTTCCAATTTGTCAGCTTATATGGCTGAAAAACTTGGGGTAGAAAACAGCAAAATCCCAGAATTGAGCAACTTACTTTACAAGAATTATGGAACAACAATGGCTGGTCTGAGAGTATGTCCTTTTCATCCTATCTAGAAATCCTTGAAACGTAAAACAAGAAATGGAAAGATTATCAAACCTTACTGTTCATTTGGTTTTGTATTTTGCAGGCCATTGGGTATGACTTTGACTATGATGAATATCATAGGTATGCCTTTGCCTCCTCTATCATCTTTTTCTTTACTCTGTTTTTTTGACTATTAAGAAAAATGCTGTGATAGTTCATGAAGAAGCTTTGGTATTAAAATTTATTGACAATTTTGTTGGGTCTACTCAAACCTCTAGGCCACAAGAATTTACCTAAAACTCTCCCATCACATTTTTTAAATGAAAAGCTATTTGGAGTATTATTAACTTTCAATTTTGAAAAACCACAAAAAGACCTTTGAAATGGTAGTTGAAATGAGTTTTTTTTTTTTTTTTTGTATTTTACCAAAATTTGTGTTATATATACATATGCAGTTATTTTATCCACTCACATACAAAATTATTAAAATAATTTAAAAACAAGATTTGTTACATCACAAGTTATTATTATACAATTTAGTGAGATACACATAATATAGATGATGCTTGAAATACACCTTATGTATTTTTCTTGTTTGCATCTATACTTAAAGTTGGTGGTGTGAACTAACATACTCCATGTTTGGTGGACTCCAAATACAACAGTGATATTTACAATTATTTATAACATTCAATCAACTATAGCCATATTATTTGAAATCTCTAATTATTAGGTCGTTTTATATTTTCTTATTAGTACTCAACTATTATACCCTCCACTGTCTATTATAACCCATAAATTTTAATAACTAATTCAATGGGATATATGTCACTTTAAAAGTTTCTTTTTCTTCTTTGGTTGGGTTGAATTAGAAGCAAAAAAGAGAGAAAAAAAAAGATGCAGTCAACTAACAATCAAATGTTTTATTCTCCATTCAACAAAGTATTTGAGTGTTACTAAAGTCTCACTCTCATTAGGGGGGAAAAACACTAGACAATGGTTTTGTTTTGAATCTAAAAGAAAATTTGAGTTTTTTTTTTCCTTTTTTCTTTTTTACGAGAAACGATGAAATTGAATTTGATGGATTGAATGATTAGAAAAGGGCAAACGATGTCATGTACATTACAAAAAAGCAATGATTTCATTATGTAATAAGAGATGAGATTGTAGAAACAAAAGAAGGTGGAAATTTTACTCCAAGACACAAAAATTTTGTATGCTTGCGATAATTGTCTTTTATAATATGTGACTTTTCAAATTTCTTTTCTCTATATCAAACTTATTTATAAAATATCACGATCCATTTACCATAAATCGAGATAAATTATGAAAGATTTTGTTATTTGGTTTCTTTATACAATTTCAATTGATTCAATATGACAGGTTTGTCCATGGGAGATTGCCTTATGACAACCTAAAACCTGATCCCATTTTAAGAAACCTTCTGCTAAGCCTACCATACAGGAAACTTGTAAGTACTTCAATTCACATGCCCATTTATATTTTCATTTTTTTTTCTTTTTCTAACAGACCCTTGTTTTGTTTGAAAAATTAGATCTTTACCAATGCAGACAGAGATCACACTGCCAAAGTACTGAACAAACTTGGATTAGAAGATTGCTTTGAAGGCATTATATGCTTTGAAACCCTCAATACTCCTCCACAAAAAAGCTCTGTTTTAGATGAAAAAGAGCACATTCCAAGCAGTGAAGTTTTTGATATAATTGCCCATTTCTCTCAACCAAATTACCCTCTAATGGAGTTGCCTATTACACCTATTGTTTGTAAACCATCAGAAGCTGCCATTGAATGGGCTCTCAAGATTGCAAACATTGACCCTCAAACAACTGTAAGAAAATTCTCTTGGAATTTAGATTTAGTAATTATATTATTTGGTCATGTTAAATATTTATATGATTAACGACTGTTAAGTATTTATATAGTTAAGATTTTGGGTTACTTCTTACTTTTGTGTTTTGTTCTGTTTTTTAGTTGTTTTTTGAAGATAGCCTTAGGAACATTCAAGCAGGCAAGCGACTTGGGCTTCAAACTGTGTTGGTAAGTTGCTAGGGAATTAAGAGTGAGTTCTTGAGAAGGTTAAATTATACACAATATTCTTAAATTTGGGAGTAAAACTTTGAAATGTGTTAAACAAAGGATGAAAATTACCATGACAGTTTGATCTGTAAAAATCGTTTGACAAACAAATCTTGAACTTGTGGGCATAATTATTATTATTATTGCTTTGTGTGGGTGTAGGTTGGCACATCTCATAGAAGTAAAGGAGCAGATTATGCAATTGAAAGCATTCACAACATAAAGGAAGCAATACCAGAACTTTGTGAAGTTGAAATGAAATCAGAACTCAATTATTCAGCCAATAATAATAGTGTAGCAGTGGAGACTTCTGTCACAGCTTAATTATTAGATCCATCAAACCCTAATATTAAATTCTATGTCAAAAGTTGAATAAAGTTGTTATGTACAAATTATCAAGTCTCATCCTCTGTTCTTGGCCTCCTTTTCTAACCATAATAAATTAAATGTTGTTTGTAGCTTTTCTAAGCTCATATATATATCTTCTCGGATGCACCTCTCGCAAATTGTAAATTTTGCTTTCCATTTAGGTTTCGGTTTCGAATCCTAATGTTTTCCTCTTCCCAAATTGCCTATGACGATCAAATTTTATTTGTAGTATCGTGATTCTTATGACAAAAATGCAATGTCCAAAAAATTGTTTGTTTCAAGTTTTGAAATAATGAAAAATAAAATTCTATTCGTCATAAGATGATTTGCCAACATGTTTGGGGAA ATGGAATATGATAAGTGTTACAGATCAAAGGCACAAATTCCAAATTTTGATTGTCTTCTCTTTGATCTTGATGACACTCTGTATCCTCTAAGCTCTGGCTTAGCAACAGCTTGCAAAAACAACATACATGCTTATATGGCTGAAAAACTTGGGGTAGAAAACAGCAAAATCCCAGAATTGAGCAACTTACTTTACAAGAATTATGGAACAACAATGGCTGGTCTGAGAGCCATTGGGTATGACTTTGACTATGATGAATATCATAGGTTTGTCCATGGGAGATTGCCTTATGACAACCTAAAACCTGATCCCATTTTAAGAAACCTTCTGCTAAGCCTACCATACAGGAAACTTATCTTTACCAATGCAGACAGAGATCACACTGCCAAAGTACTGAACAAACTTGGATTAGAAGATTGCTTTGAAGGCATTATATGCTTTGAAACCCTCAATACTCCTCCACAAAAAAGCTCTGTTTTAGATGAAAAAGAGCACATTCCAAGCAGTGAAGTTTTTGATATAATTGCCCATTTCTCTCAACCAAATTACCCTCTAATGGAGTTGCCTATTACACCTATTGTTTGTAAACCATCAGAAGCTGCCATTGAATGGGCTCTCAAGATTGCAAACATTGACCCTCAAACAACTTTGTTTTTTGAAGATAGCCTTAGGAACATTCAAGCAGGCAAGCGACTTGGGCTTCAAACTGTGTTGGTTGGCACATCTCATAGAAGTAAAGGAGCAGATTATGCAATTGAAAGCATTCACAACATAAAGGAAGCAATACCAGAACTTTGTGAAGTTGAAATGAAATCAGAACTCAATTATTCAGCCAATAATAATAGTGTAGCAGTGGAGACTTCTGTCACAGCTTAA ATGGAATATGATAAGTGTTACAGATCAAAGGCACAAATTCCAAATTTTGATTGTCTTCTCTTTGATCTTGATGACACTCTGTATCCTCTAAGCTCTGGCTTAGCAACAGCTTGCAAAAACAACATACATGCTTATATGGCTGAAAAACTTGGGGTAGAAAACAGCAAAATCCCAGAATTGAGCAACTTACTTTACAAGAATTATGGAACAACAATGGCTGGTCTGAGAGCCATTGGGTATGACTTTGACTATGATGAATATCATAGGTTTGTCCATGGGAGATTGCCTTATGACAACCTAAAACCTGATCCCATTTTAAGAAACCTTCTGCTAAGCCTACCATACAGGAAACTTATCTTTACCAATGCAGACAGAGATCACACTGCCAAAGTACTGAACAAACTTGGATTAGAAGATTGCTTTGAAGGCATTATATGCTTTGAAACCCTCAATACTCCTCCACAAAAAAGCTCTGTTTTAGATGAAAAAGAGCACATTCCAAGCAGTGAAGTTTTTGATATAATTGCCCATTTCTCTCAACCAAATTACCCTCTAATGGAGTTGCCTATTACACCTATTGTTTGTAAACCATCAGAAGCTGCCATTGAATGGGCTCTCAAGATTGCAAACATTGACCCTCAAACAACTTTGTTTTTTGAAGATAGCCTTAGGAACATTCAAGCAGGCAAGCGACTTGGGCTTCAAACTGTGTTGGTTGGCACATCTCATAGAAGTAAAGGAGCAGATTATGCAATTGAAAGCATTCACAACATAAAGGAAGCAATACCAGAACTTTGTGAAGTTGAAATGAAATCAGAACTCAATTATTCAGCCAATAATAATAGTGTAGCAGTGGAGACTTCTGTCACAGCTTAA MEYDKCYRSKAQIPNFDCLLFDLDDTLYPLSSGLATACKNNIHAYMAEKLGVENSKIPELSNLLYKNYGTTMAGLRAIGYDFDYDEYHRFVHGRLPYDNLKPDPILRNLLLSLPYRKLIFTNADRDHTAKVLNKLGLEDCFEGIICFETLNTPPQKSSVLDEKEHIPSSEVFDIIAHFSQPNYPLMELPITPIVCKPSEAAIEWALKIANIDPQTTLFFEDSLRNIQAGKRLGLQTVLVGTSHRSKGADYAIESIHNIKEAIPELCEVEMKSELNYSANNNSVAVETSVTA* Homology
BLAST of CsaV3_4G025090 vs. NCBI nr
Match: XP_004142063.1 (uncharacterized protein C24B11.05 [Cucumis sativus] >KGN54260.1 hypothetical protein Csa_017982 [Cucumis sativus]) HSP 1 Score: 598.2 bits (1541), Expect = 3.8e-167 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. NCBI nr
Match: XP_008448042.1 (PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Cucumis melo]) HSP 1 Score: 576.6 bits (1485), Expect = 1.2e-160 Identity = 281/291 (96.56%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. NCBI nr
Match: XP_038881258.1 (uncharacterized protein C24B11.05-like [Benincasa hispida]) HSP 1 Score: 537.7 bits (1384), Expect = 6.1e-149 Identity = 270/292 (92.47%), Postives = 279/292 (95.55%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. NCBI nr
Match: XP_023517092.1 (suppressor of disruption of TFIIS-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 483.8 bits (1244), Expect = 1.0e-132 Identity = 242/280 (86.43%), Postives = 259/280 (92.50%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. NCBI nr
Match: XP_022966113.1 (suppressor of disruption of TFIIS-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 483.8 bits (1244), Expect = 1.0e-132 Identity = 240/280 (85.71%), Postives = 259/280 (92.50%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy Swiss-Prot
Match: Q09893 (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC24B11.05 PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 6.4e-16 Identity = 48/129 (37.21%), Postives = 73/129 (56.59%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy Swiss-Prot
Match: P53078 (Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SDT1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15 Identity = 66/242 (27.27%), Postives = 104/242 (42.98%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy Swiss-Prot
Match: P40025 (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PHM8 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-12 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy TrEMBL
Match: A0A0A0KX85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296140 PE=4 SV=1) HSP 1 Score: 598.2 bits (1541), Expect = 1.8e-167 Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy TrEMBL
Match: A0A1S3BIS9 (uncharacterized protein C24B11.05-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490338 PE=4 SV=1) HSP 1 Score: 576.6 bits (1485), Expect = 5.7e-161 Identity = 281/291 (96.56%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy TrEMBL
Match: A0A6J1HQZ0 (suppressor of disruption of TFIIS-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465895 PE=4 SV=1) HSP 1 Score: 483.8 bits (1244), Expect = 5.1e-133 Identity = 240/280 (85.71%), Postives = 259/280 (92.50%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy TrEMBL
Match: A0A5A7ST31 (Suppressor of disruption of TFIIS-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold184G00460 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.1e-132 Identity = 241/270 (89.26%), Postives = 250/270 (92.59%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. ExPASy TrEMBL
Match: A0A6J1CQH0 (uncharacterized protein LOC111013642 OS=Momordica charantia OX=3673 GN=LOC111013642 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132 Identity = 239/291 (82.13%), Postives = 262/291 (90.03%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. TAIR 10
Match: AT5G02230.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 377.9 bits (969), Expect = 7.5e-105 Identity = 195/292 (66.78%), Postives = 228/292 (78.08%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. TAIR 10
Match: AT5G02230.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 377.9 bits (969), Expect = 7.5e-105 Identity = 195/292 (66.78%), Postives = 228/292 (78.08%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. TAIR 10
Match: AT5G59480.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 334.7 bits (857), Expect = 7.3e-92 Identity = 163/287 (56.79%), Postives = 211/287 (73.52%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. TAIR 10
Match: AT5G59480.2 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 330.1 bits (845), Expect = 1.8e-90 Identity = 163/287 (56.79%), Postives = 210/287 (73.17%), Query Frame = 0
BLAST of CsaV3_4G025090 vs. TAIR 10
Match: AT5G59490.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 302.8 bits (774), Expect = 3.1e-82 Identity = 151/280 (53.93%), Postives = 190/280 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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