CsaV3_4G024490 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G024490
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase
Location	chr4: 14337980 .. 14340961 (-)
RNA-Seq Expression	CsaV3_4G024490
Synteny	CsaV3_4G024490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAATTTTCTGTTTTTACAGTATGGTCGGTTTGGATCTTTGATTTCAGACCGGCTTTTATCGATGGGCTTGATGGTTCGGTCATTTGCTTAATTTGTGTTCGAACTTGGGACGGTGAACACCGCCCCTTTCAGTGAAGCGAACCATAAGCTCAGCTGTTCTTCTTCAACCTTTCTCACTCATCTCCTTCTTCGCGAAAAATGTCGAACCTCAGTCTCCTCCGTAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCCGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAAGCCCCACCTGAGTCCTCCCCCAATCGTTTTTCCGATAAAACAAATACAGATGGTATGAACCTCGCTCCTACGTCGTCGCAGCATCTGGACGATGTTCTGTCGTGTGTAATATCTTGGGAGAGGTTTAGGGTTTATAGACGGTGGCGGGGTATAATTTTTTGGCTGATTGTTTGAAACGAGTTAGTTAGGGTTTGTATCTTTGGCCCTGCTTAACTAAATCCTTTCGGTGTATTTTATTTTGGTAATTAATTTCTTGTCTGATGTTATGTATTGCAATGCATAATGTGGTTTTTGTGATACTCTTCTCAGGTTTGAGGTTTGGGAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATGTAATTTGAGTTTTGAGGATGTCAAATTTGAATACGTCCGAAATTTCGTCCCGACCTCCATGTAATATTCTTCTTTTGGATTATTTTTTATGTAGATGTTTCATTATTATGTTCTACCACTGTTGTTATGGTTCTATTTCTACTGCGTCATGGAAACTTGGAAACTAAAACGATCGAAGAGTATCTAATTGCCCTTTTGTTCCTTCGATCATTTTAAGACAAATGCAGCTCTAAACCCTGGATATTAGCTTATATGTTAATCTATTGAATATATGTTCAATTAAGTGTGTTGTTTGTGAATATATACTTGAGTAACATTGGTGTTTGAGGTTGGTTTTCATTAATTATTTATGAATGTTGTAATCAGAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGTGATCTTTTGATGGATGCCTTGTTATTGAATTTTTTTTAATTATGTTTTTAAAAGTTTAGAAATCTATAACTTTTATTCTAAATTTCAGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTAATGTCAATCTTTGTAAACTTATAAACTTACTATCAATTGAGAAATCTCTTTTTTCAATCATATTCTTGTTTTTGCCTTTGGCAACTTTGATTTTTTTTTTATCAGAAAGCAACCATTCTACTTTAGTTTTGTTTATCTAATATCATGTGATCGAATAACATGGTTTCAAGGATCAAGTATACATATCAATATGTTCTCTCTTCTTCTAGTGCATTATGATTAACTTTAGTGGTTCGTTCCTCACACTCTCAATCTAAAATTGTTTATAGAGAGTAATTTTTCATGTTAAGCTCTTTAGAAGAGAGTAAAAAGTATCTGCTAAGTTCCATGTGGTCGGGATCTTCTCTTATAGCTTCATGAGAATGTAAAATTGCAGGAACTACCTCAACTATTAATGTTTGGGTTTTTCATAATAAGTTCATTTGTAAGGATAATAATGCACTGATTCAATTGATACTTGATGCTTCAAGATTGAGGATTGGCAAATGGCAACCTTCCTAGCTTTAGGTTTGTTGTTCATAAAATCGTATGTTGCTTATTGTGCAGACTGCAGTTAATTTGTATCTCATATTACATTTAAACCTTAGATTGATTCTGAAGTTGTTTCTGTGAGATTCAATCTTCTATGCATTTATAGGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGCAAGCTCAATCAACTTTTACAGGTAGAGATCAATTATTTGTGATGAAGTTTAGAGTTAGAATTACCTTGCTATTACTTAGTGTAAATATTCACCTCTCTTACTTCTAGCTTTGCTAATTTTCTTGAATTGGAGAGGTATATTGTATCTCCTTTTGGATATAAGTTTATTGCTCCTTTCGTTTGTAAGTTCGTTCCATGCATCAATCAAATTGTTTCTTATAAAGAAAACAAATTATACATAAAACAAAATCATGACTAATTTAGTATTATTTGTATGAATTTTTGGTGATGCACGGTTTGGTTTCATTCTATTGTATATTTTTGGTGATCCGATTTGCAAAACCTAACTGAACCAAAAGTTTGGATTCCTTATAATTTCAAGTTGAATCTAACCATCATTTAGTGTAAATTGAATTTTTGGATTCGGTTACATTTGGTCGGTTTTAATGAACACTTGTAATTTGATACACCATTGCAGGGGATCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCAGTTCCGTTCACCAATACAAGCAATGCATGCATTTCTCACAAAAAACAGAGGCTTTTGTCTGAACAACCAAATTTCGATGCGAGTTCTCCAATAACTAGTAACTTTTTGTCATTTGTATTCTGACTTTTTTTTTAGTTGGCTCAGTGGCTGGGGTTTTTGTAGTTGCTCTTATAAGTTATGATTTGCATCTTCGTATCTCAAGTCTCCAGTAGGTTATCCACATTCAAAGTGACATGAAATCTTTCATTTTTCACTTATTAGCAGTTTGTTTGTGCTAAAGAATCTGCTTTTGTAAGGTAGGGTTTTTGGACTTTTGAATATTGAATTTATATGAATAATATAAGGTTGTCCAAGCATCTAGTTTTACTAGATTGTGTTTCTTCATTGCAACACGTTCGGGTTCTTGATTGTCCATGGTTTGTTTCGAACATCTAAGTAGTGTTTGGC

mRNA sequence

ATGTCGAACCTCAGTCTCCTCCGTAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCCGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAAGCCCCACCTGAGTCCTCCCCCAATCGTTTTTCCGATAAAACAAATACAGATGGTTTGAGGTTTGGGAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATGTAATTTGAGTTTTGAGGATGTCAAATTTGAATACGTCCGAAATTTCGTCCCGACCTCCATAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGCAAGCTCAATCAACTTTTACAGGGGATCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCAGTTCCGTTCACCAATACAAGCAATGCATGCATTTCTCACAAAAAACAGAGGCTTTTGTCTGAACAACCAAATTTCGATGCGAGTTCTCCAATAA

Coding sequence (CDS)

ATGTCGAACCTCAGTCTCCTCCGTAAGGCTCTGGGATCCAATTTCATTTCTCGATCGGCGACGGCAAATCATGAACTTCCTCTGTTTTTCCGCCAATCTCCAAGATTCTTCTCCACGGAACAGGAACAAGCCCCACCTGAGTCCTCCCCCAATCGTTTTTCCGATAAAACAAATACAGATGGTTTGAGGTTTGGGAAATTGGTCGGTGCCTCACGGAGTATGCTAAAATCGGATGTGCTCATTTTGCTTCAAGGATGTAATTTGAGTTTTGAGGATGTCAAATTTGAATACGTCCGAAATTTCGTCCCGACCTCCATAATGATCCAGTTCCCCTCCGAGCAGGCCTATCAAAATGCTTTTCAAGCGATTGCAAGAAAAGGTTACTTGCAAAGAATGGAGCGGGCTGATCGTTCGCAGTGGGAGCTGCTTTCACCTTACAATGGAAAAACTGTTTTACTAGAAGGAATACCTCGAAATGCATTGGTAGAAGATCTGGAACGCTTCTTATCTGGTTGTGACTATGATGCAAGCTCAATCAACTTTTACAGGGGATCCTTTTCAGCCCCCACAAAAACGGCAACGGTGCAGTTCCGTTCACCAATACAAGCAATGCATGCATTTCTCACAAAAAACAGAGGCTTTTGTCTGAACAACCAAATTTCGATGCGAGTTCTCCAATAA

Protein sequence

MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTDGLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSINFYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ*

Homology

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BLAST of CsaV3_4G024490 vs. NCBI nr
Match: XP_004142097.1 (uncharacterized protein LOC101220680 isoform X1 [Cucumis sativus] >KGN54201.1 hypothetical protein Csa_018042 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 2.2e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD
Sbjct: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF
Sbjct: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN
Sbjct: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180

Query: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
           FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ
Sbjct: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 226

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BLAST of CsaV3_4G024490 vs. NCBI nr
Match: XP_008447318.1 (PREDICTED: uncharacterized protein LOC103489786 [Cucumis melo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.2e-105
Identity = 192/226 (84.96%), Postives = 208/226 (92.04%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFFRQSPRFFSTE+EQ PPESSPNRFSDK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           G  +GKL G SRS LK+DVLILL+GCNLS +D+KFEY RNF P S+MIQFPS+QAYQ+AF
Sbjct: 61  GFMYGKLFGFSRSTLKTDVLILLEGCNLSLDDIKFEYSRNFFPVSMMIQFPSQQAYQHAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           QAIARKG+L R+ERADRSQWELLSPYNGKTV L+GIPRNALVED+ERFLSGCDYDASSIN
Sbjct: 121 QAIARKGFLHRLERADRSQWELLSPYNGKTVFLQGIPRNALVEDVERFLSGCDYDASSIN 180

Query: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            YRGSFS PTK ATVQF SPIQAMHAFLTKNRGFCLNNQISM+VLQ
Sbjct: 181 IYRGSFSEPTKMATVQFLSPIQAMHAFLTKNRGFCLNNQISMQVLQ 226

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BLAST of CsaV3_4G024490 vs. NCBI nr
Match: XP_023544682.1 (uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.9 bits (821), Expect = 9.1e-84
Identity = 158/227 (69.60%), Postives = 190/227 (83.70%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           M+NL+LLRKALGS+FISRSAT NH LP+FFRQS RFFSTE EQ+PPESS + F D +   
Sbjct: 1   MTNLNLLRKALGSHFISRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSADSFLDTSGAT 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R++LK+D++ LL+GCNLS +DVK EY R+F PTS+M+QFPS +AY NAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKAYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I R+G + R+ERADRSQW+LLSPYNGKTVLL+GIPRNA ++D+ERFLSGCDYDA+SIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R S   P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

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BLAST of CsaV3_4G024490 vs. NCBI nr
Match: XP_022949855.1 (uncharacterized protein LOC111453126 [Cucurbita moschata])

HSP 1 Score: 318.5 bits (815), Expect = 4.5e-83
Identity = 157/227 (69.16%), Postives = 189/227 (83.26%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           M+NL+LLRKALGS+F SRSAT NH LP+FFRQS RFFSTE EQ+PPESS N F D + T 
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R++LK+D++ LL+GCNLS +DVK EY R+F PTS+M+QFPS +AY NAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I R+G + R+ERADRSQW+LLSPYNGK +LL+GIPRNA ++D+ERFLSGCDYDA+SIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R S   P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CsaV3_4G024490 vs. NCBI nr
Match: XP_022977775.1 (uncharacterized protein LOC111477976 [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 2.9e-82
Identity = 156/227 (68.72%), Postives = 187/227 (82.38%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           M+NL+LLRKALGS+FIS SAT NH LP+FFRQS RFFS E EQ+PPESS N F D   T 
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R++LK+D++ LL+GCNLS +DVK EY R+F PTS+M+QFPS ++Y NAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I R+G + R+ERADRSQW+LLSPYNGKTVLL+GIPRNA ++D+ERFLSGCDYDA+ IN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R S   P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

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BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL
Match: A0A0A0L225 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293110 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD
Sbjct: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF
Sbjct: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN
Sbjct: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180

Query: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
           FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ
Sbjct: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 226

[Close]

BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL
Match: A0A1S3BH58 (uncharacterized protein LOC103489786 OS=Cucumis melo OX=3656 GN=LOC103489786 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 192/226 (84.96%), Postives = 208/226 (92.04%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           MSNL LLRKALGSNFISR AT+NHELPLFFRQSPRFFSTE+EQ PPESSPNRFSDK+NTD
Sbjct: 1   MSNLGLLRKALGSNFISRPATSNHELPLFFRQSPRFFSTEREQPPPESSPNRFSDKSNTD 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           G  +GKL G SRS LK+DVLILL+GCNLS +D+KFEY RNF P S+MIQFPS+QAYQ+AF
Sbjct: 61  GFMYGKLFGFSRSTLKTDVLILLEGCNLSLDDIKFEYSRNFFPVSMMIQFPSQQAYQHAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           QAIARKG+L R+ERADRSQWELLSPYNGKTV L+GIPRNALVED+ERFLSGCDYDASSIN
Sbjct: 121 QAIARKGFLHRLERADRSQWELLSPYNGKTVFLQGIPRNALVEDVERFLSGCDYDASSIN 180

Query: 181 FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            YRGSFS PTK ATVQF SPIQAMHAFLTKNRGFCLNNQISM+VLQ
Sbjct: 181 IYRGSFSEPTKMATVQFLSPIQAMHAFLTKNRGFCLNNQISMQVLQ 226

[Close]

BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL
Match: A0A6J1GDZ1 (uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC111453126 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 157/227 (69.16%), Postives = 189/227 (83.26%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           M+NL+LLRKALGS+F SRSAT NH LP+FFRQS RFFSTE EQ+PPESS N F D + T 
Sbjct: 1   MTNLNLLRKALGSHFTSRSATPNHGLPVFFRQSSRFFSTEGEQSPPESSANSFLDTSETA 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R++LK+D++ LL+GCNLS +DVK EY R+F PTS+M+QFPS +AY NAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSWKAYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I R+G + R+ERADRSQW+LLSPYNGK +LL+GIPRNA ++D+ERFLSGCDYDA+SIN
Sbjct: 121 RVIGRRGRMYRLERADRSQWDLLSPYNGKIILLQGIPRNAALDDVERFLSGCDYDATSIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R S   P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL
Match: A0A6J1INA4 (uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.4e-82
Identity = 156/227 (68.72%), Postives = 187/227 (82.38%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           M+NL+LLRKALGS+FIS SAT NH LP+FFRQS RFFS E EQ+PPESS N F D   T 
Sbjct: 1   MTNLNLLRKALGSHFISHSATPNHGLPVFFRQSSRFFSMEGEQSPPESSANSFLDTLETA 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R++LK+D++ LL+GCNLS +DVK EY R+F PTS+M+QFPS ++Y NAF
Sbjct: 61  GLVYGKLYGITRNVLKTDIVNLLEGCNLSLDDVKVEYNRSFTPTSMMMQFPSRKSYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I R+G + R+ERADRSQW+LLSPYNGKTVLL+GIPRNA ++D+ERFLSGCDYDA+ IN
Sbjct: 121 RVIGRRGRIYRLERADRSQWDLLSPYNGKTVLLQGIPRNAALDDVERFLSGCDYDATLIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R S   P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASIPEPIRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL
Match: A0A6J1I6U3 (uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 158/227 (69.60%), Postives = 185/227 (81.50%), Query Frame = 0


Query: 1   MSNLSLLRKALGSNFISRSATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 60
           MS L LLRKALGS+F++ SA ANH LP+FFRQSPRFFSTE EQ P E   + F D + T 
Sbjct: 1   MSALGLLRKALGSHFVTPSARANHGLPVFFRQSPRFFSTEGEQPPLEPPADSFLDTSKTA 60

Query: 61  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVRNFVPTSIMIQFPSEQAYQNAF 120
           GL +GKL G +R+ LK+D++ LL+GCNL+ +DVK EY R+F PTS+M+QFPS QAY NAF
Sbjct: 61  GLVYGKLYGITRNTLKTDIVNLLEGCNLNLDDVKVEYNRSFTPTSMMMQFPSRQAYDNAF 120

Query: 121 QAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASSIN 180
           + I RKG L R+ERADRSQW++LSPYNGKTVLL+GIPRNALVED+ERFL GCDYDA+SIN
Sbjct: 121 RVIGRKGRLYRLERADRSQWDILSPYNGKTVLLQGIPRNALVEDVERFLLGCDYDATSIN 180

Query: 181 -FYRGSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
            F+R SF  P + ATV F SP QAMHAFLTKNRGFCLNNQI MRVLQ
Sbjct: 181 MFFRASFPEPMRMATVLFPSPTQAMHAFLTKNRGFCLNNQILMRVLQ 227

[Close]

BLAST of CsaV3_4G024490 vs. TAIR 10
Match: AT5G02740.1 (Ribosomal protein S24e family protein )

HSP 1 Score: 165.2 bits (417), Expect = 6.0e-41
Identity = 93/229 (40.61%), Postives = 137/229 (59.83%), Query Frame = 0


Query: 4   LSLLRKALGSNFISRS---ATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 63
           +S+ R A+ S+   R      +   LP F ++  +  ST  EQ PP S        +  +
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVR--NFVPTSIMIQFPSEQAYQN 123
           G  +GK  G S+  LK+D++ +L+GC+L+ +D+KF Y R  N  P ++ +QFPS  AY  
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASS 183
           A + IA+KG L R+E+A R+QW+ + PY GK V L GIP NA+ +D++RFLSGC Y   S
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 180

Query: 184 INFYR-GSFSAPTKTATVQFRSPIQAMHAFLTKNRGFCLNNQISMRVLQ 227
           I F          + A V+F S  QAM+A++TKNR F LN +I+++VLQ
Sbjct: 181 IQFLTVQGLGTSKRVALVRFTSQTQAMNAYITKNRNFLLNQRITLQVLQ 228

[Close]

BLAST of CsaV3_4G024490 vs. TAIR 10
Match: AT5G02740.2 (Ribosomal protein S24e family protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 74/183 (40.44%), Postives = 109/183 (59.56%), Query Frame = 0


Query: 4   LSLLRKALGSNFISRS---ATANHELPLFFRQSPRFFSTEQEQAPPESSPNRFSDKTNTD 63
           +S+ R A+ S+   R      +   LP F ++  +  ST  EQ PP S        +  +
Sbjct: 1   MSITRSAIRSSLCLRKLDPEISRSSLP-FLQEWRKCLSTATEQPPPASPLPPPPGGSPGE 60

Query: 64  GLRFGKLVGASRSMLKSDVLILLQGCNLSFEDVKFEYVR--NFVPTSIMIQFPSEQAYQN 123
           G  +GK  G S+  LK+D++ +L+GC+L+ +D+KF Y R  N  P ++ +QFPS  AY  
Sbjct: 61  GRFYGKFSGFSKHALKTDIMNVLEGCSLTSDDLKFNYPRGGNLTPAAVFVQFPSLSAYDK 120

Query: 124 AFQAIARKGYLQRMERADRSQWELLSPYNGKTVLLEGIPRNALVEDLERFLSGCDYDASS 182
           A + IA+KG L R+E+A R+QW+ + PY GK V L GIP NA+ +D++RFLSGC Y   S
Sbjct: 121 ALRNIAKKGKLYRLEKAARAQWDPIVPYEGKVVALHGIPVNAITDDIDRFLSGCLYYPGS 180

The following BLAST results are available for this feature:

BLAST of CsaV3_4G024490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142097.1	2.2e-122	100.00	uncharacterized protein LOC101220680 isoform X1 [Cucumis sativus] >KGN54201.1 hy...	[more]
XP_008447318.1	3.2e-105	84.96	PREDICTED: uncharacterized protein LOC103489786 [Cucumis melo]	[more]
XP_023544682.1	9.1e-84	69.60	uncharacterized protein LOC111804194 [Cucurbita pepo subsp. pepo]	[more]
XP_022949855.1	4.5e-83	69.16	uncharacterized protein LOC111453126 [Cucurbita moschata]	[more]
XP_022977775.1	2.9e-82	68.72	uncharacterized protein LOC111477976 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G024490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G024490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L225	1.1e-122	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293110 PE=4 SV=1	[more]
A0A1S3BH58	1.6e-105	84.96	uncharacterized protein LOC103489786 OS=Cucumis melo OX=3656 GN=LOC103489786 PE=...	[more]
A0A6J1GDZ1	2.2e-83	69.16	uncharacterized protein LOC111453126 OS=Cucurbita moschata OX=3662 GN=LOC1114531...	[more]
A0A6J1INA4	1.4e-82	68.72	uncharacterized protein LOC111477976 OS=Cucurbita maxima OX=3661 GN=LOC111477976...	[more]
A0A6J1I6U3	2.4e-82	69.60	uncharacterized protein LOC111471264 OS=Cucurbita maxima OX=3661 GN=LOC111471264...	[more]

BLAST of CsaV3_4G024490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02740.1	6.0e-41	40.61	Ribosomal protein S24e family protein	[more]
AT5G02740.2	2.5e-31	40.44	Ribosomal protein S24e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 149..225 e-value: 1.1E-6 score: 30.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58
None	No IPR available	PANTHER	PTHR48167	EXPRESSED PROTEIN	coord: 7..226
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 144..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G024490.1	CsaV3_4G024490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding