CsaV3_4G021930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G021930
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 12984017 .. 12984349 (+)
RNA-Seq ExpressionCsaV3_4G021930
SyntenyCsaV3_4G021930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGAGTTGCGAACTTGCGAACTCGGCTTGAGTTCGTGGCTGGATTGCGATCGGTTGCGAATCGTGACAAAAACGTGGAGTTTGTGATGGACGCGGACGAAGACGGGCGTGAATCGAAGCTGCGAATGGACGCGGATGAAGACGAACGTGAATCGGAGCTGCGAATGGTTGCAGACGAAGACGGACGTAAATCGGAGCTGCGAACTGACGTGAACGAAGACGGACTTGAATCGGAGCTACGAACGAACGTGCGATCTGGGTTTAACGGATCTGGGTTCGTCGGATCTGATTTGCAAGAGACCGACGCGTGGATCGTTGAACGGAGATGA

mRNA sequence

ATGGTTAGAGTTGCGAACTTGCGAACTCGGCTTGAGTTCGTGGCTGGATTGCGATCGGTTGCGAATCGTGACAAAAACGTGGAGTTTGTGATGGACGCGGACGAAGACGGGCGTGAATCGAAGCTGCGAATGGACGCGGATGAAGACGAACGTGAATCGGAGCTGCGAATGGTTGCAGACGAAGACGGACGTAAATCGGAGCTGCGAACTGACGTGAACGAAGACGGACTTGAATCGGAGCTACGAACGAACGTGCGATCTGGGTTTAACGGATCTGGGTTCGTCGGATCTGATTTGCAAGAGACCGACGCGTGGATCGTTGAACGGAGATGA

Coding sequence (CDS)

ATGGTTAGAGTTGCGAACTTGCGAACTCGGCTTGAGTTCGTGGCTGGATTGCGATCGGTTGCGAATCGTGACAAAAACGTGGAGTTTGTGATGGACGCGGACGAAGACGGGCGTGAATCGAAGCTGCGAATGGACGCGGATGAAGACGAACGTGAATCGGAGCTGCGAATGGTTGCAGACGAAGACGGACGTAAATCGGAGCTGCGAACTGACGTGAACGAAGACGGACTTGAATCGGAGCTACGAACGAACGTGCGATCTGGGTTTAACGGATCTGGGTTCGTCGGATCTGATTTGCAAGAGACCGACGCGTGGATCGTTGAACGGAGATGA

Protein sequence

MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVADEDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR*
Homology
[Close]
BLAST of CsaV3_4G021930 vs. NCBI nr
Match: KAE8649454.1 (hypothetical protein Csa_018893 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-50
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD 60
           MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD
Sbjct: 1   MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD 60

Query: 61  EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR 111
           EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR
Sbjct: 61  EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR 110

[Close]
BLAST of CsaV3_4G021930 vs. ExPASy TrEMBL
Match: A0A0A0LAX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G497370 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.0e-51
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 

Query: 1   MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD 60
           MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD
Sbjct: 1   MVRVANLRTRLEFVAGLRSVANRDKNVEFVMDADEDGRESKLRMDADEDERESELRMVAD 60

Query: 61  EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR 111
           EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR
Sbjct: 61  EDGRKSELRTDVNEDGLESELRTNVRSGFNGSGFVGSDLQETDAWIVERR 110

The following BLAST results are available for this feature:
BLAST of CsaV3_4G021930 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8649454.11.4e-50100.00hypothetical protein Csa_018893 [Cucumis sativus][more]
BLAST of CsaV3_4G021930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G021930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAX27.0e-51100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G497370 PE=4 SV=1[more]
BLAST of CsaV3_4G021930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G021930.1CsaV3_4G021930.1mRNA