CsaV3_4G017330 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G017330
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	chr4: 10823184 .. 10830172 (+)
RNA-Seq Expression	CsaV3_4G017330
Synteny	CsaV3_4G017330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAGGAGAGGAGAGGAGAGGCGAGCCCTATGGCAGCGTTGGCACCAAAGATTCACCCACAGAGTTGGCGGCGTGAGGTTGAAGCAGGGATAGTTATAGAAAGAGAAGAAAGACAAAGGGCAGCGGCGAGGAGGGTGATCGGAGACGAGAAAAGAAATCGGAGCGTGGTGCCGGTGAGGGCGAGCGGGTGCAGCAAAAATGGGAGAAGGAAATGAAAGCAAAGCAAAATTGGGTGTGGGAATGGGAATAAAGGTAAAGGGTTTTTCCTTTTCTTTTTATTTCACGTGGGAACCGTGGGATTTTGTGTTTTGGGGATTCTAACTTAAATAAAAAAAATATACCATTAGTTTTATCAAAATAAATTAAAATATTTCCTAGCAAAATTTTAGATTTTATCGCAATATTTTTTTTAAATTATTTTTAAAAAAAAATTATATTTTTACAATTACATTATATTTTCTTTTTTTCTTCTCTTTTTCTTTAAAAAAAACATTTACTAACGTTGGGATCTAAAATGTTATTGACTTGTTGTTGCCTTAAGTGCTAATTCTGGGTTTTGAACAAAGTACCTCATTGGGAGGGATTTATTATCCTCTTATTGGTCATGTAAGAAGGATTTGATTTAGTGGTTATAGCATAAAACATTTGTTTGAGCTGAGACTTGATGAATAATATATAATTTGATAGAACTAAGACATGCACAGCGAAAAAAGAATCGAATTTCTACCCTAATTGTCACAATTAACATGTAGCCCTAAACTAATCAAGTTAGGGTTTTAGGAAATATTACCTTTGAAGGTTTCAAAAAACTTTGATACCTTCTTGTCAATTCAAACCAAGACCACAACTAGTACTCAACTACTATCCTCTTGGACAAAGAACCGGGTTGTGGGACCCAATTTGGTGTGGAAAGAAATGGAGATAAAATGGGATTGGAAGGTAGAAATTTTTTTTCTTTTGTTGAGATGTTGGAGGAAAATAAAAAAGAGGCAAAAGTCTTCAACCATTTGAAAACTCCTATTTGTAACTTAATTACATGCATTGCCAAATCTCAACACTTAATGTTCCACTAATAATTAGTGGAACTCAGTGGGCTAGGTGTCTATATCTCATATAGCCACATATCCCACTAAGAGTTAGTGGGATTATCCGACAAAATGTTGGATTTTCCCACTAACTTAGTCCAAGGGTAAAATGGTCATTAAATATTTCAAGTCAAAAGTCAATATTTTGACTTTTTACCATTTTGTCCGTCTTGACTAATTCCAACTTCCGCGAGCATGAATCCGCATTCATTTTTCCAAAATTCAAGTCACATTTGAATATGAGGTGGAGAGTATATGGACTTACGATTCCAAGACTATTTAATAAAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACATAATTTTAGGGATAAAATAGTATTTTGGCCTAGTCAAATTTGTGAACAACCTCTACACCTTAACGTGGTTAGTTGTATTAAGTCTATATAAAATATATTTACAATAGGAAATGCAACTATGGACAATTCTCTCAATTAACAAATGTTGATTAACCAAGTTAAAAGAGTTTAGTCAACTAATCTTTAATTGTTGAAGCTCGTGATTTGCAAGTCAATTAGACCATTTGTTAACTCGTTACAAGCTTAGAATAGTGTGGTCGAAGAATTTAAAATGTTCCAATTGGTTTATAAAATAAATTGTTAATAGTATTATATGTGGTTGTCAAACTATAAATTGATTGAAATTTTCTATTTAAATAAATAGTTTTGCATGTGTATCAGTTACAAACTTAATGAACACCGAGTAATTTGCAGGGAATCACCTTGAGTTTGTAACGCTATCTCTACTTAAACACTCTTCAAGTTGATCACTTCATCGATCCCACGATCAAGTTCTAAGTCCAAGATATAGTGGAGAAGATATTGGTGGTGGTTTTTGTTACATTCATGAACAAAATCACACAATAACTTGCCATGAATTTTAGAGTTATGACATGTTTTAGTCCTGAATATTAATATAATTAGGATTATATTAGATATTTTTGTTGTTATTCACTCTTATATGTTGTGACTTAAAACCATGGACGTTTCAAAATTTTCAATTATAATTCAACATTTTAGTTTTTTCGTTTAAATTTGGAGGGTTTTTTTTCCAGTGATGGTTTATATATAGGTTAATAGTGCTTCCTTACGACCACATCCCTGTTTTGTGTTTTTATTTAACAACTAATCTGATACGATGACAGTGTTTGCACATACCATGCATTTTTTTCCTCATTCGCCAACGTGCATTTTGGCTATTTCACTTTGACACCTCACTCACATCTCTCTTTCACGTTAATCGTTCTTTCATTCATTTTCATATTCTCTTATTGTCTATTTATTTGTCTTTATATTTACCTTCAAATCACTATCTTTATGCTGACCGTTAAGTCGAGAAGTGAGGCTATTTTATTTGTAATTTGAATTAATATGTTGTTGTTTTTCTTTGTTATCGGAAGAAAATGTATACACATTCAAAGTTTCGTAAGGGTTAAACTAGAAAGTTTAGAAAGTTTTAATTACTATTATTTTTTAAGGAAATAAAATTAAAGTTTAACCGTAATTAAAATTAAAATCTCACATTGTAAAAGGAAACTGAAAATTACAAAGTAATTTTGAAAAGTTGGAGTGGGGAAATATAATAATTAAAAAAAGATGAAAGAAGAGGGGGCGATATTTCACGCCGTTATGAAAGCGGATATCATTCGCCAAACTTCAGTGAACTGCGGGGTAACTCTCACACATTTTTCCTCACAAACTCCTTTCTTCTCTTCTTTAGTTTTGATCTAATTGAAGAACCCTTGTTTGAATTCTTTGTTTTTTTTTTTTTGAAGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGGTTCCATTTTCCTTCTCTCTCTTTATATATATATATATATACATATATTCTGCTTGATATCCAAGTTCATGATTCAAACCTACGAATTCCTGCTCCATTATGTCTTACAAAGGATGTAGTAGCGTTTCTCAACAAGTGACTTTGAATCCTCACAAATTTCTATGCAAATGCCACATAATTGTTGTAATCGAATGGTAATGCTAATGGAACCACTTATTGGAAGAAATTTAATATGGGTTCATATCCGTGTACGCATTGGAATTGTTTATCCTCTTCGGAGGTTGATCCTTATAGAATTTATTTTTTCCAAAGGCGATAATCAACACTCTTATAGACATTTCTCCATCCTTAACCCACCGGCTGATTTAGTATAGGCTCAAAGGACTGAGCCCACCTCAACTTTATTCTATTTATATAACTGAAATAATACAAGAAACAGCAGCTAGCTCAGTGATAAAATTTTCCTCCGGTCTCTCTAAGCTAAGGTTCAAGCTCACTCCATACATTTTTTTTCCAAATTATTTTTCCTTAATTATAAAGCCTCCGTCAACAAATTGTTTTAGATCTGCCGCTGCCTTAATCAATAGCTTTATCCATTGTAAATGAAGAGCATCTTTAATTGATAATTTTTCTGGGAAACAATATACTAGCAATACTTATTTAAGATGATGGTGAAAGCTTATGTATGTCTAATGTTTGTCTCGGTGCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTACGTGAGGTTCTTCAACCTTTTCTTCCTATTTACTGTTCAGATTTGGATATTGATCAGATATCTGTTAAATAAAGATATTGAAGTTGTCATCATCTTCATTCTTATTGGATTGGCTGTGAATGTGTATGTTAGTAGATCAAACGTGAGATTCAAAAAAATGTGGAAAAGTGAACCTCCCCATTAGCCAAATAGTTGCAAAAAACTCTCTATTGACTGTTTGACTGTCAAAAGAAAAATGGCTAAAAAGCAGCTAAAGAGAGTACACAATCTAAAAAACCTGATAGATAATTTTATCAATAGTCTTTTGCAAAGTATAGGAGGCTTCCTTGACGTTCATTTCCAATCCAATAACCAAGACTATTGCACCCTGCCAAGAGCCTCCAAAATATAATGATCTTATCAATGAGTCCATTGCAAATGATCAGTGGAAAGATGCTCTCTAAATTCTGATCATCTTGGGTTTATATTGTTTGAAATATGTTATAAGTTTCTCATCTCTTGTAATGATTTTTTCATTGTAATCTTAAGTATTTTGTTTATTCTATCACTGTTATAAGCCCATACTCGGTTAAGTTGTTTCAAACATCCCACTCAACTAACAACTCATTCGCCAACTCTCTCCGAGAATTTGGAGAGAGGAATGAGGGGTAGCTTCTTCAGAAATTTGATTATTAACTACACAGGATTTGGTAATGGTGACTTTAACGGCTTAGGCTTATGCTGCATCAATTATTGTATTATCAATAATGGGAATTGTTGGAGCCCACAATAAACCGCCTCTTCTGCTAATTTGCTTAATAGTCAACATGGGAGCTTAGTGTTTGCATTACATGCATTTTTTTGTTGTTGTGTCGCTGCAGTATTTGTTAAAAACAAAAGGAATTGCTTTGTCAGGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGTTTCCCTTGTTGTCTTTGACCAATACTTCCATTTGTCTAGCCCAATTGACTGAAGTGTGATGCCAGAATTCTTTTAAGTCCATTGTCAAAGTCGGCTCCATATTTAACTGAACTTGGCTTTCTCTGGTCTTTTGCTTTATAAATATGAATATATGACTACCTTCAGTTACCGTGTACTGTGGACAGGAACATTTTTCACGTTTTTCACGTTTCTTGTGGAGTGATTTCTTTGGAATGAGTTCCACAAGAGTATCAACTCATATTTAGATTATACCATTTGTAGATTCTTGAATTATGATTTTATGCTAGCTTCGTTTTTCTTAAACTTAGATATTGAGAATGAAGTTTTTAGAGTTTTCTACATAGTAAATGCTCCTATCTTATCAACCAAATTGGGATATTGGAACTGTTGGTCTGACAGTAGCATAAATGACATTCGCAGTTTTCTACATGCATTCAATTATTTGCTATGGAGTCAGTCTCAAATTTTTTGTTTTTACTTCTTTCTTTTCTGATACTTGATTGTGTATAACTGTTAAATTTAAACCAAGAGTTTAAGGCCGCTTTTAAATTCTACACAATTTGGTTGCAAGGCTTTTGATTTGCCAAATTTCACCATTGTGGGTAAAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTTATTGTATCAGTGTATGCATTTTATCTGCTTCTTCACATATTTAAGGGTTCTATTGTATATAACTCATGTGCATTTGTTTGACTATTAACGGTTTTTTAACTGCCAGCTGGGGGATACAGGATCCCAGTCCCAAGTCATATGCCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTGATTGGAGACCTCTCTTTTTCCTTTTCTTGTGGGCTCTATTTTTATGTCCTTTCATTCTCTCGTTCATTATTAAAGAAAGTTCAGTTTCACATAAAAAATAAGCTTTGTATGCTGCATTATTTTACTCAATGCCCCCACTGATAGAAGAACCTAAGCTCCATATAGTTTTGCTGTAGAGACCGATAAAAAAAATTATCTCCTTGATGATTTATATTTTGTTGGGCTTGCCATTCACAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTAACAGTAATATGATGTGGTACCGCGCATTTAAATTTTAATCAGTAAACTCTCTCGGGCCTAATAGTTCTTTCATTGACTACTATTAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAGGTCTTGGAATGAGGTGCTGTTATTTTTATACAGTTTCATGTATACTATCATTAGTTTAGGAGTTGTAAAGTGTGCAACAAAAGCACTTTTTGATGTCTTGTCGAAATTGTCACCTTATTTATATTTATTTGAAGTGTCATTTTGAAATCTTTATACCCAAAACCGGAATGCAAAGTGCATTACAGTACGTAAGCCAGAAGTAGAAGTTTTCTTTTACCTCCCCTAAACTGTAGCTTTGGTTCTCCTTTCTTGTCCTCTATAAATGCAAGGAACCTGCTCTTCCATTGTAAGTATCCAATTTTTGTGTGCCTAAGATAGTTGGATTGTATTGAGCAGAATTACTATTTGACTGTTGCTTCAAGGAATAGAGTATAAATAGGTATCCATCCCAAACAACCTAAACTTGC

mRNA sequence

ATGAGCGAGGAGAGGAGAGGAGAGGCGAGCCCTATGGCAGCGTTGGCACCAAAGATTCACCCACAGAGTTGGCGGCGTGAGGTTGAAGCAGGGATAGTTATAGAAAGAGAAGAAAGACAAAGGGCAGCGGCGAGGAGGGTGATCGGAGACGAGAAAAGAAATCGGAGCGTGGTGCCGGTGAGGGCGAGCGGAAGAGGGGGCGATATTTCACGCCGTTATGAAAGCGGATATCATTCGCCAAACTTCAGTGAACTGCGGGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGCTTTTGATTTGCCAAATTTCACCATTGTGGGTAAAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTTATTGTATCAGTCTGGGGGATACAGGATCCCAGTCCCAAGTCATATGCCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAG

Coding sequence (CDS)

ATGAGCGAGGAGAGGAGAGGAGAGGCGAGCCCTATGGCAGCGTTGGCACCAAAGATTCACCCACAGAGTTGGCGGCGTGAGGTTGAAGCAGGGATAGTTATAGAAAGAGAAGAAAGACAAAGGGCAGCGGCGAGGAGGGTGATCGGAGACGAGAAAAGAAATCGGAGCGTGGTGCCGGTGAGGGCGAGCGGAAGAGGGGGCGATATTTCACGCCGTTATGAAAGCGGATATCATTCGCCAAACTTCAGTGAACTGCGGGATTTAGTTGTTTCTGGATTAGGGTTCACAATGCCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTCGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCAAATCACTGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGTAGAAACCAATATGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCCTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATTCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGCTTTTGATTTGCCAAATTTCACCATTGTGGGTAAAGTTGAAAAGAGAACCAGCAAACGTTCCAGCCCCTTGTTATTGTATCAGTCTGGGGGATACAGGATCCCAGTCCCAAGTCATATGCCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCTGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTACTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAGTACCGCAGAAGCTTCCCAACCTCCTCCTACAAGGAGAACAACACGAAGTTCTGCACGCCAGCGGTAG

Protein sequence

MSEERRGEASPMAALAPKIHPQSWRREVEAGIVIEREERQRAAARRVIGDEKRNRSVVPVRASGRGGDISRRYESGYHSPNFSELRDLVVSGLGFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR*

Homology

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BLAST of CsaV3_4G017330 vs. NCBI nr
Match: KAE8649414.1 (hypothetical protein Csa_021680 [Cucumis sativus])

HSP 1 Score: 866.7 bits (2238), Expect = 8.6e-248
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0


Query: 1   MSEERRGEASPMAALAPKIHPQSWRREVEAGIVIEREERQRAAARRVIGDEKRNRSVVPV 60
           MSEERRGEASPMAALAPKIHPQSWRREVEAGIVIEREERQRAAARRVIGDEKRNRSVVPV
Sbjct: 1   MSEERRGEASPMAALAPKIHPQSWRREVEAGIVIEREERQRAAARRVIGDEKRNRSVVPV 60

Query: 61  RASGRGGDISRRYESGYHSPNFSELRDLVVSGLGFTMPELSWRHHTLIQSLLSRGPLRED 120
           RASGRGGDISRRYESGYHSPNFSELRDLVVSGLGFTMPELSWRHHTLIQSLLSRGPLRED
Sbjct: 61  RASGRGGDISRRYESGYHSPNFSELRDLVVSGLGFTMPELSWRHHTLIQSLLSRGPLRED 120

Query: 121 QFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD 180
           QFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD
Sbjct: 121 QFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSD 180

Query: 181 DQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQAFDLPNFTIVGKV 240
           DQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQAFDLPNFTIVGKV
Sbjct: 181 DQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLENQAFDLPNFTIVGKV 240

Query: 241 EKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFV 300
           EKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFV
Sbjct: 241 EKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFV 300

Query: 301 NLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKK 360
           NLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKK
Sbjct: 301 NLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKK 360

Query: 361 ACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEAS 420
           ACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEAS
Sbjct: 361 ACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEAS 420

Query: 421 QPPPTRRTTRSSARQR 437
           QPPPTRRTTRSSARQR
Sbjct: 421 QPPPTRRTTRSSARQR 436

[Close]

BLAST of CsaV3_4G017330 vs. NCBI nr
Match: XP_031740711.1 (non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >XP_031740712.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus])

HSP 1 Score: 684.9 bits (1766), Expect = 4.6e-193
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK
Sbjct: 121 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
           TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 437
           KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Sbjct: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 340

[Close]

BLAST of CsaV3_4G017330 vs. NCBI nr
Match: XP_008449859.1 (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 1.3e-155
Identity = 288/341 (84.46%), Postives = 296/341 (86.80%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           ISALNLQLENQ  D                               P    +PAAFKNFSK
Sbjct: 121 ISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSK 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           SHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
           +EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Sbjct: 241 SEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 437
           KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Sbjct: 301 KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 312

[Close]

BLAST of CsaV3_4G017330 vs. NCBI nr
Match: XP_038900598.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 532.7 bits (1371), Expect = 2.9e-147
Identity = 274/348 (78.74%), Postives = 291/348 (83.62%), Query Frame = 0


Query: 89  VVSGLGFTMPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTI 148
           VVS LGF MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTI
Sbjct: 15  VVSELGFRMPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTI 74

Query: 149 NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDS 208
           NKALSFAQFELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD 
Sbjct: 75  NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDP 134

Query: 209 SAQGGISNISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMP 268
           SAQGGISNISALNLQLENQ  D             T  +S  +                P
Sbjct: 135 SAQGGISNISALNLQLENQMGD-------------TGSQSQVI----------------P 194

Query: 269 AAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEA 328
           AAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEA
Sbjct: 195 AAFKNFSISLKEKTIAELAQDKWLSCSPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEA 254

Query: 329 GVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTR 388
           GVKAELC+TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT 
Sbjct: 255 GVKAELCNTEDCTVRVHRYCLKKMLSNKKSKRACPGCGIQWRSTASNIESREEEDEPDTH 314

Query: 389 TQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 437
           TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +RR TR SAR R
Sbjct: 315 TQDQPSSHKRKKSRLNIDIDLGSNEDCMAEAFQPPASRRATRRSARPR 333

[Close]

BLAST of CsaV3_4G017330 vs. NCBI nr
Match: XP_038900599.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 522.3 bits (1344), Expect = 4.0e-144
Identity = 268/340 (78.82%), Postives = 285/340 (83.82%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           MPELSWRHHTLIQ+LL+RGPLRED FHLLF +ITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           ISALNLQLENQ  D             T  +S  +                PAAFKNFS 
Sbjct: 121 ISALNLQLENQMGD-------------TGSQSQVI----------------PAAFKNFSI 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           S KEKTIAELAQDKWL C+PDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELC+
Sbjct: 181 SLKEKTIAELAQDKWLSCSPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCN 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
           TE CTVRVH+YCLKKMLSNKKSK+ACPGCG +W+ST SNIE +EEEDEPDT TQDQPSSH
Sbjct: 241 TEDCTVRVHRYCLKKMLSNKKSKRACPGCGIQWRSTASNIESREEEDEPDTHTQDQPSSH 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 437
           KRKKSRLN+DIDLG NED  AEA QPP +RR TR SAR R
Sbjct: 301 KRKKSRLNIDIDLGSNEDCMAEAFQPPASRRATRRSARPR 311

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-08
Identity = 56/238 (23.53%), Postives = 94/238 (39.50%), Query Frame = 0


Query: 167 DGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNISALNLQLEN 226
           DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G  ++IS LNL  E 
Sbjct: 73  DGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--LSDNGFATSISILNLADEL 132

Query: 227 QAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKSHKEKTIAEL 286
           Q+                                           K   K   E+ +   
Sbjct: 133 QS-------------------------------------------KKMKKKEVEQLLQSF 192

Query: 287 AQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSTEVCTVR 346
            Q+KWL    +G   L  R  ++L  + R+   DV   C VC +  ++++LC  E C + 
Sbjct: 193 VQEKWL-IGRNGEYTLHTRCIMELEHYIRNTYQDVAKICNVCRKVAIQSQLC--ENCGIP 252

Query: 347 VHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKS 402
           +H  C  K   + K+   CP C   W     ++     +    ++T+     ++R K+
Sbjct: 253 LHLQCAGKYF-HGKANPTCPNCNESWPHEIPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.1e-06
Identity = 65/308 (21.10%), Postives = 114/308 (37.01%), Query Frame = 0


Query: 99  ELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDN-DQQVFNSYLLTINKALSFAQF 158
           +++  H   +Q L+S G +       L +        N      + ++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 159 ELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISNI 218
           ++     + DG  YY LVN V +D +K+ + Y+  ++ LF+  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 219 SALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSKS 278
           S LNL  E Q+                                           K   K 
Sbjct: 124 SILNLADELQS-------------------------------------------KKMKKK 183

Query: 279 HKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRS--NDVPS-CEVCNEAGVKAEL 338
             E+ +    QDKWL    +G   L  R  ++L  +  +   DV   C VC++  ++ +L
Sbjct: 184 EVEQLLQSFVQDKWL-IGRNGEYTLHTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQL 243

Query: 339 CSTEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPS 398
           C  E C + +H  C   +     +   CP C   W     ++   +   +  + +Q  P 
Sbjct: 244 C--ENCGIPLHLQC-AGIYFRGIANPLCPNCKESWPHEIPDL--SQVSSQGPSHSQAAPV 260

Query: 399 SHKRKKSR 403
             + ++SR
Sbjct: 304 RGRNQRSR 260

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL
Match: A0A0A0KZ19 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=3 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 9.8e-165
Identity = 303/340 (89.12%), Postives = 305/340 (89.71%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           ISALNLQLENQ  D             T  +S  +                PAAFKNFSK
Sbjct: 121 ISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSK 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
           TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 437
           KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR
Sbjct: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 311

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL
Match: A0A1S3BMD8 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3656 GN=LOC103491611 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 6.4e-156
Identity = 288/341 (84.46%), Postives = 296/341 (86.80%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           MPELSWRHHTLIQSLLSRGPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           ISALNLQLENQ  D                               P    +PAAFKNFSK
Sbjct: 121 ISALNLQLENQLGDTG-----------------------------PQSQVIPAAFKNFSK 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           SHKEKTIAELAQDKWLDCTP+GFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPEGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
           +EVCTVRVH+YCLKKMLSNKKSK+ACPGCGTRWQST SNIE KEE DEPDTRTQDQPSSH
Sbjct: 241 SEVCTVRVHRYCLKKMLSNKKSKRACPGCGTRWQSTMSNIESKEEVDEPDTRTQDQPSSH 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 437
           KRKKS+LNVDIDLGPNEDSTAEASQPPP TRR TR+S RQR
Sbjct: 301 KRKKSKLNVDIDLGPNEDSTAEASQPPPDTRRATRNSTRQR 312

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 6.2e-135
Identity = 253/341 (74.19%), Postives = 283/341 (82.99%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           I+AL+LQLENQ  D+               +SS ++               P AFKNFS 
Sbjct: 121 IAALHLQLENQLGDM-------------GSQSSQVI---------------PPAFKNFSI 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELC 
Sbjct: 181 SLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCD 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
            E CTVRVHQYCLKKMLSNKKSK+ACPGCGT+W+ST +N+E KEEEDEPD RTQ Q SS 
Sbjct: 241 NEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQ 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 437
           +RKKSRLN+D+D   ++ + A ASQPPP TRR TRSSARQR
Sbjct: 301 RRKKSRLNIDMD---SDSNGASASQPPPETRRVTRSSARQR 310

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL
Match: A0A6J1DJY3 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 6.2e-135
Identity = 253/341 (74.19%), Postives = 283/341 (82.99%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           I+AL+LQLENQ  D+               +SS ++               P AFKNFS 
Sbjct: 121 IAALHLQLENQLGDM-------------GSQSSQVI---------------PPAFKNFSI 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELC 
Sbjct: 181 SLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCD 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
            E CTVRVHQYCLKKMLSNKKSK+ACPGCGT+W+ST +N+E KEEEDEPD RTQ Q SS 
Sbjct: 241 NEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQ 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQR 437
           +RKKSRLN+D+D   ++ + A ASQPPP TRR TRSSARQR
Sbjct: 301 RRKKSRLNIDMD---SDSNGASASQPPPETRRVTRSSARQR 310

[Close]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL
Match: A0A6J1DLJ6 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.8e-134
Identity = 252/340 (74.12%), Postives = 282/340 (82.94%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           M ELSWRHHTLIQ+LL+RGPLREDQFHL+F +ITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIA +KAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
           I+AL+LQLENQ  D+               +SS ++               P AFKNFS 
Sbjct: 121 IAALHLQLENQLGDM-------------GSQSSQVI---------------PPAFKNFSI 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           S KEKTIAELAQD+WL+CTPDGFVNLGVRSFLDLRSWFR+ND+PSCEVCNEAGVKAELC 
Sbjct: 181 SLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCD 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396
            E CTVRVHQYCLKKMLSNKKSK+ACPGCGT+W+ST +N+E KEEEDEPD RTQ Q SS 
Sbjct: 241 NEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQ 300

Query: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPP-TRRTTRSSARQ 436
           +RKKSRLN+D+D   ++ + A ASQPPP TRR TRSSARQ
Sbjct: 301 RRKKSRLNIDMD---SDSNGASASQPPPETRRVTRSSARQ 309

[Close]

BLAST of CsaV3_4G017330 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 318.9 bits (816), Expect = 6.2e-87
Identity = 171/341 (50.15%), Postives = 222/341 (65.10%), Query Frame = 0


Query: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156
           M  LSW+HHTLIQ+L+SRGPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216
           FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIA FK I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276
             ALN++LENQ                +S+ SS                 +P AFKNFS 
Sbjct: 121 FDALNIRLENQI---------------SSEASSS-------------QQQVPPAFKNFSM 180

Query: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336
           + KEKT+ EL +DKWL  T +  + LG+RS LDLRSWFR+NDVPSCEVCNEAGVKA+LC 
Sbjct: 181 TQKEKTLDELVRDKWLCRTRERNIGLGIRSLLDLRSWFRNNDVPSCEVCNEAGVKADLCP 240

Query: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSS 396
           TE C VR+H+YCLKK+LS +  K+ C GCG  W  S  +  E  EE    +  ++ Q ++
Sbjct: 241 TEGCPVRIHKYCLKKLLSQRDDKR-CSGCGKPWPLSKITKTEAAEEAMNDEEESETQATA 300

Query: 397 HKRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 437
            K K+ R   D     +  ++  ++    TRR TRS    R
Sbjct: 301 PKAKRRRQQRDSTENGSSQASLASTSGANTRRVTRSVGHSR 312

The following BLAST results are available for this feature:

BLAST of CsaV3_4G017330 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649414.1	8.6e-248	100.00	hypothetical protein Csa_021680 [Cucumis sativus]	[more]
XP_031740711.1	4.6e-193	100.00	non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >X...	[more]
XP_008449859.1	1.3e-155	84.46	PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ...	[more]
XP_038900598.1	2.9e-147	78.74	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincas...	[more]
XP_038900599.1	4.0e-144	78.82	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincas...	[more]

BLAST of CsaV3_4G017330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	1.9e-08	23.53	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	3.1e-06	21.10	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of CsaV3_4G017330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ19	9.8e-165	89.12	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus O...	[more]
A0A1S3BMD8	6.4e-156	84.46	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3...	[more]
A0A6J1DI86	6.2e-135	74.19	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1DJY3	6.2e-135	74.19	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1DLJ6	1.8e-134	74.12	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]

BLAST of CsaV3_4G017330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	6.2e-87	50.15	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 34..54
None	No IPR available	GENE3D	3.90.1150.220		coord: 101..177 e-value: 8.8E-14 score: 53.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 375..407
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..430
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..436
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 266..433
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 97..228
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 320..379 e-value: 1.4E-10 score: 42.5
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 180..318 e-value: 7.2E-18 score: 66.5
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 104..310 e-value: 1.9E-41 score: 142.1
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 266..433
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 97..228
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 322..365 e-value: 1.2E-7 score: 32.0
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 321..367 e-value: 4.96641E-13 score: 61.2917

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G017330.1	CsaV3_4G017330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030915	Smc5-Smc6 complex