CsaV3_4G014870 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATCTCGTATCCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATTCAAGCAAGCCCATCCAAACACATCAACTCAACATCCCGCTCTCACTCCCCACCCGACGTAGGGGCGCAACATTCCGACCAAACCCTTCCGCCAAGAAGGAAGTAATCGCAAGTCATCTTGTATTCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATCCAAGCAAGCCCATCCAAGCACATCAACTCGACATCCCGCTCTCGCTCTCCACCCGACGTAAAGGCTCGGTATTTTGACCAAACCCTTCCAACAACCACGAAGCAATCGCAAGTCATCTCGTATTGTCAAGAGCAAGCAAGCCCGGACGACGCCCACAACAAGGTGCAAGCATTATCTAGGCCTGCCCATTCGA ATGACATCTCGTATCCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATTCAAGCAAGCCCATCCAAACACATCAACTCAACATCCCGCTCTCACTCCCCACCCGACGTAGGGGCGCAACATTCCGACCAAACCCTTCCGCCAAGAAGGAAGTAATCGCAAGTCATCTTGTATTCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATCCAAGCAAGCCCATCCAAGCACATCAACTCGACATCCCGCTCTCGCTCTCCACCCGACGTAAAGGCTCGGTATTTTGACCAAACCCTTCCAACAACCACGAAGCAATCGCAAGTCATCTCGTATTGTCAAGAGCAAGCAAGCCCGGACGACGCCCACAACAAGGTGCAAGCATTATCTAGGCCTGCCCATTCGA ATGACATCTCGTATCCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATTCAAGCAAGCCCATCCAAACACATCAACTCAACATCCCGCTCTCACTCCCCACCCGACGTAGGGGCGCAACATTCCGACCAAACCCTTCCGCCAAGAAGGAAGTAATCGCAAGTCATCTTGTATTCTCAAGAACAAGCAAGCCCAAACGACGCCCACAACAAAGTGCAAGCATCATCCAAGCAAGCCCATCCAAGCACATCAACTCGACATCCCGCTCTCGCTCTCCACCCGACGTAAAGGCTCGGTATTTTGACCAAACCCTTCCAACAACCACGAAGCAATCGCAAGTCATCTCGTATTGTCAAGAGCAAGCAAGCCCGGACGACGCCCACAACAAGGTGCAAGCATTATCTAGGCCTGCCCATTCGA MTSRILKNKQAQTTPTTKCKHHSSKPIQTHQLNIPLSLPTRRRGATFRPNPSAKKEVIASHLVFSRTSKPKRRPQQSASIIQASPSKHINSTSRSRSPPDVKARYFDQTLPTTTKQSQVISYCQEQASPDDAHNKVQALSRPAHSX Homology
BLAST of CsaV3_4G014870 vs. NCBI nr
Match: KAE8649393.1 (hypothetical protein Csa_011819, partial [Cucumis sativus]) HSP 1 Score: 281.6 bits (719), Expect = 3.9e-72 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. NCBI nr
Match: KAE8637138.1 (hypothetical protein CSA_015445 [Cucumis sativus] >KAE8637435.1 hypothetical protein CSA_004613 [Cucumis sativus] >KAE8637437.1 hypothetical protein CSA_004615 [Cucumis sativus]) HSP 1 Score: 139.0 bits (349), Expect = 3.2e-29 Identity = 86/167 (51.50%), Postives = 94/167 (56.29%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. NCBI nr
Match: KAE8637438.1 (hypothetical protein CSA_004616 [Cucumis sativus] >KAE8637439.1 hypothetical protein CSA_004617 [Cucumis sativus]) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 75/150 (50.00%), Postives = 80/150 (53.33%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. NCBI nr
Match: KAE8637548.1 (hypothetical protein CSA_023857, partial [Cucumis sativus]) HSP 1 Score: 119.4 bits (298), Expect = 2.6e-23 Identity = 60/79 (75.95%), Postives = 66/79 (83.54%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. NCBI nr
Match: KAE8637434.1 (hypothetical protein CSA_004612 [Cucumis sativus]) HSP 1 Score: 112.5 bits (280), Expect = 3.2e-21 Identity = 75/150 (50.00%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. ExPASy TrEMBL
Match: A0A5A7UP03 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00670 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.6e-16 Identity = 67/143 (46.85%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. ExPASy TrEMBL
Match: A0A5D3DBP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00310 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.6e-16 Identity = 67/143 (46.85%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. ExPASy TrEMBL
Match: A0A5A7SSW5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001570 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 2.4e-06 Identity = 35/60 (58.33%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of CsaV3_4G014870 vs. ExPASy TrEMBL
Match: A0A5D3BW21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00500 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05 Identity = 60/183 (32.79%), Postives = 82/183 (44.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|