CsaV3_4G014570 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G014570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	BnaA09g07220D protein
Location	chr4: 10058170 .. 10061219 (-)
RNA-Seq Expression	CsaV3_4G014570
Synteny	CsaV3_4G014570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAAAATATTTTTATTTGTTAAATGGGAAATGATTTTTTATTTGTTTAGTTCCGAAAGATTTATAATTTAGGATTAAAATCTTATTTACATGTTTCCTGTAATTTTCAGGTCACAACCCTTTTTCTAGGATATTTTTATCATGCATCAGGTTCGTATTTGTTACCAAACTTGACGAGGCAGTAGCTAAGTTAATTTAGTTGGTTGGATGCCCACACGACGAAGCAACAGGGTTATAAATCCCATTTTGGTTCCCAAACTTCTAAATTGTTTATTTTGGTTTATGAACTTTCAAAGCATCCATTTTATTTTGTTTTTAATGTTACTTGCATAAACTTGTTCATCAAATGGATATTCAAATATGTACAATTATTTCAAGTATGTTGGCCGAGGGAGGTCTTGAATGGGGCAAATGTTGATAAAATAACAAGGAACAAAGTTGCTAGCCTTAACGATTATTCAGTATTTGATGTTCTTAATCTCGATATACGATTTTCTTCTTAGGTGAGGAGGGAAGCACTATGGAGGAAGAGAATGAAGTCGAAGGTATCTGCCTAATTTTTCGAAGTATCTGAAGTTGACAATGATATTGCAGCATTGCTGTACTGATAATATAACTCGATAATCAATCTTGGTTAAAATTGTCAAATTGGATTTTGACCACGTCTATAACTTAAATATCTATTTTAAGCATGGAATTAGTGATATTAAACTTTGCAATACGTCTGGAACTCCCGAGATTTGAACAAATTCCTCTACTACTAGGTGATCAATTAACAATCTGTAGCAGGAGCCAAGGAATTAAAAGAAAACAAGAGAAACGAAAGAAGAGCTCAAGGGAAAATGTAGAGGATTAGATTAGAGACAAGATTTATTATTTCTTATAGCTGACACGATTGCTTTTTTTGTGTCCTGTTATTTGTTTGAACTTTTGTAGAGAAAGGAATCTGGAACTTGAGAATCACCATGAAAATCTTTATTTCTTGTAGCTGATACGATCATTCCCATTGATAAAAATTATTTACTGATTTAGGAAGAACTATAAGTATAGAAGTAGCTAGAGAGCCTCACAAGTGTAAGAATGTGTATGAACGAAATTTTTTGAATGAAAAAATTGAATATATTTTTGGATCTGTAGGCCTATACTAACACATACAAAAATATTGATTTAATAATGCTAGTGCACGATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATACCATGACCAAAGTGTTATATGTTGGCCCTGATACTTGTTCGATGATTTCCAAATTACTCATAGTCGACGAAGATGATTATGAAGCTTGGGGTGTGGAACCATATGACTTTGATTCTAGTTACTTCCATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAGTTTGATCTGCCTTATGAGAAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATACTTCTCTTCACGATACCTTAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATATTTGCTGGTAAACCCCTTATTTTAGTTTCGTTTTATAGATATCCAAAACACTTGGAAGTGAGAGTTCATTATAACATAATTTCCTTTTCTTTTAATCTCAAACTATACTATCCTTATCATTTTTCCTTTCTTTCAATGTTATGCAGGTCATCCGGATTATCCAGTTTCAGAATTTACCAGATACAAATTTGACCATGAGGTTAGAATTATGGAACTTGATGAGTGTGTTTGGAATACATCCGTAATTTATAAATGAGTACATTTATTTGTTCCTCTTATATTCTATTAGGTTCTCAAGTACAAGTATATAACACCAAACACAAAGATAAAACTGGATTGCACTATCAAAAGAAATTACAATATAACAATAGCCCTTGAAGAGGGCTATATCTCTCCAACAATCTACTAAAAGTAGATAATTTCAAATTACGACCTCCCCTCATGAACTCTAACTTTCTCTATTTACAACCAAGACCGCTAGCTAATGACCAATATATACCTTACCAATATCCTCCTAATATTTCCGATGTATCTCCCAATAATACTCTCATAGATCATAGATAGTCAGGAAACAATCCGGCGGTGTTCTATCACTGAATATCACAGTTTGTTCACTTATATTGTTGCATATTCTGAAACAAGATGGGATGACAAAGAAACTAAATAGAGAATGTAGAATTATATACTGCTTTTTGGGAGGCAATGTTTGCCTTTTCTAGAGTAACTTTTAAGCTTATGCCTAATATTTGATAATCAATCATTCAAACTATCCTCAAGTTAGGCAATTCTAATAAAAAATTACTAATTTACATGCATTGGAATTTAACCTACTGATTAGCAATGACCCATTTGGCTTTTGATTTTGTTTGTGGATTTTGCAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAGTCAAAAGAATTTGGAAGAGAATGAAGCTGCTAGAAAGAGGTTTAAAAAAATTTTAAGGGAAATTTCATATAAACCAGCATGCCAAGTCTTTTTTCTCAAGTCAGGATGATGCCATTATCAAATTTTAGAAATATTTTTTGGTTTTATTTCTTTAGCAAGTAGAAACCATTCTTCAGGGTAATTTATTAGAGTAGCTCATTCATTTTAGAATAGGAAAATTATCG

mRNA sequence

ATGGAGGAAGAGAATGAAGTCGAAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATACCATGACCAAAGTGTTATATGTTGGCCCTGATACTTGTTCGATGATTTCCAAATTACTCATAGTCGACGAAGATGATTATGAAGCTTGGGGTGTGGAACCATATGACTTTGATTCTAGTTACTTCCATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAGTTTGATCTGCCTTATGAGAAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATACTTCTCTTCACGATACCTTAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATATTTGCTGGTCATCCGGATTATCCAGTTTCAGAATTTACCAGATACAAATTTGACCATGAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAGTCAAAAGAATTTGGAAGAGAATGAAGCTGCTAGAAAGAGGTTTAAAAAAATTTTAAGGGAAATTTCATATAAACCAGCATGCCAAGTCTTTTTTCTCAAGTCAGGATGA

Coding sequence (CDS)

ATGGAGGAAGAGAATGAAGTCGAAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATACCATGACCAAAGTGTTATATGTTGGCCCTGATACTTGTTCGATGATTTCCAAATTACTCATAGTCGACGAAGATGATTATGAAGCTTGGGGTGTGGAACCATATGACTTTGATTCTAGTTACTTCCATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAGTTTGATCTGCCTTATGAGAAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATACTTCTCTTCACGATACCTTAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATATTTGCTGGTCATCCGGATTATCCAGTTTCAGAATTTACCAGATACAAATTTGACCATGAGGCCAAACTCCGAAGTCCTTCGTGGTGGAAAAGGTATTTAAGTCAAAAGAATTTGGAAGAGAATGAAGCTGCTAGAAAGAGGTTTAAAAAAATTTTAAGGGAAATTTCATATAAACCAGCATGCCAAGTCTTTTTTCTCAAGTCAGGATGA

Protein sequence

MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKRFKKILREISYKPACQVFFLKSG*

Homology

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BLAST of CsaV3_4G014570 vs. NCBI nr
Match: XP_011654354.1 (probable pectin methylesterase CGR3 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-114
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW
Sbjct: 73  MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 132

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI
Sbjct: 133 GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 192

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
           FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR
Sbjct: 193 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 252

Query: 181 FKKILREISYKPACQVFFLKSG 203
           FKKILREISYKPACQVFFLKSG
Sbjct: 253 FKKILREISYKPACQVFFLKSG 274

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BLAST of CsaV3_4G014570 vs. NCBI nr
Match: KAE8649381.1 (hypothetical protein Csa_011838 [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 7.6e-114
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW
Sbjct: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI
Sbjct: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
           FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR
Sbjct: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180

Query: 181 FKKILREISYKPACQVFFLKSG 203
           FKKILREISYKPACQVFFLKSG
Sbjct: 181 FKKILREISYKPACQVFFLKSG 202

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BLAST of CsaV3_4G014570 vs. NCBI nr
Match: XP_008454502.1 (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-101
Identity = 180/202 (89.11%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           ME+ N+VEGHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAW
Sbjct: 73  MEDVNKVEGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAW 132

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           G+EPY  DSSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTI
Sbjct: 133 GLEPYGSDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTI 192

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
           FELMRVSREGVIIFAG+PDYP+SEFTR+KFD +AKLRSPSWWKRYL+QK LEENE ARKR
Sbjct: 193 FELMRVSREGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQKELEENEVARKR 252

Query: 181 FKKILREISYKPACQVFFLKSG 203
           FKKILREISYKPACQ++FLKSG
Sbjct: 253 FKKILREISYKPACQIYFLKSG 274

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BLAST of CsaV3_4G014570 vs. NCBI nr
Match: XP_038905892.1 (probable pectin methylesterase CGR3 [Benincasa hispida])

HSP 1 Score: 348.6 bits (893), Expect = 3.7e-92
Identity = 166/202 (82.18%), Postives = 186/202 (92.08%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           +E +NEVEG TFC+ EVQT IPLLREVYDD+MTKVLYVGPDTCSM+S+LLI DE++YEAW
Sbjct: 71  LEADNEVEGQTFCSLEVQTMIPLLREVYDDSMTKVLYVGPDTCSMMSELLI-DEEEYEAW 130

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPY  D S F+CWDLIHKGIIRVAD+KF LPY +NSFSHVIISDTLEYFS RYLNSTI
Sbjct: 131 GVEPYGSDGSDFYCWDLIHKGIIRVADMKFSLPYRENSFSHVIISDTLEYFSPRYLNSTI 190

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
            ELMRVSR+GVIIFAG+PDYP++EFTRYKF+ EAKLRSPSWWKRYL Q+ LEENEAA+KR
Sbjct: 191 PELMRVSRDGVIIFAGYPDYPITEFTRYKFNREAKLRSPSWWKRYLVQRKLEENEAAKKR 250

Query: 181 FKKILREISYKPACQVFFLKSG 203
           FKKILR+ISYKPACQ+FFLKSG
Sbjct: 251 FKKILRDISYKPACQIFFLKSG 271

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BLAST of CsaV3_4G014570 vs. NCBI nr
Match: XP_022149264.1 (uncharacterized protein At3g49720-like [Momordica charantia] >XP_022149265.1 uncharacterized protein At3g49720-like [Momordica charantia])

HSP 1 Score: 284.6 bits (727), Expect = 6.5e-73
Identity = 135/201 (67.16%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           +E+ N  EGH FCT EV+ T+PLLREVYDD M KVLYVGPDTCS++S  L  DE+DYEAW
Sbjct: 72  IEDVNTFEGHGFCTPEVEITMPLLREVYDDIMNKVLYVGPDTCSLVSGFL--DEEDYEAW 131

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GV+P+ FD++   C DL+ +GI+RVAD+KF LPY  +SFSHV++SDTLEY SSRYLNST+
Sbjct: 132 GVDPFGFDANDSDCRDLVQQGIVRVADIKFPLPYRDSSFSHVVVSDTLEYLSSRYLNSTL 191

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
            EL RVS EGVII+AG+P +PVSEFTRY    +AK RSPSWW+RYL Q+ LEEN AA+KR
Sbjct: 192 AELTRVSSEGVIIYAGYPGFPVSEFTRY--SRQAKFRSPSWWRRYLVQRKLEENVAAKKR 251

Query: 181 FKKILREISYKPACQVFFLKS 202
            KKIL++ISYKPACQ+  LKS
Sbjct: 252 LKKILKDISYKPACQILLLKS 268

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BLAST of CsaV3_4G014570 vs. ExPASy Swiss-Prot
Match: Q0WPN7 (Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 9.8e-56
Identity = 106/201 (52.74%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           + E +++ G   CT+EVQ  IP+L+  Y D+M KVL+VGP+TCS++S LL  +E++ EAW
Sbjct: 57  IREVSKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLL--NEEETEAW 116

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYD + +  +C  L+HKG++RVAD+KF LPY   SFS VI+SD L+Y S RYLN T+
Sbjct: 117 GVEPYDVEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTV 176

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRY-KFDHEAKLRSPSWWKRYLSQKNLEENEAARK 180
            EL RV+ +GV++ AG+P    ++     KF   AK+RS SWW R+ SQ NLEENEAA K
Sbjct: 177 PELARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASK 236

Query: 181 RFKKILREISYKPACQVFFLK 201
           +F++   + SYKPACQVF LK
Sbjct: 237 KFEQAASKSSYKPACQVFHLK 255

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BLAST of CsaV3_4G014570 vs. ExPASy Swiss-Prot
Match: Q9M2Y6 (Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.6e-53
Identity = 103/201 (51.24%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           ++E ++V G   CT+EVQ  IP+L++ Y D M KVL+VGPDTCS++S LL   E++ EAW
Sbjct: 60  IKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL--KEEETEAW 119

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYD + +  HC   + KG++RVAD+KF LPY   SFS VI+SD L+Y S +YLN T+
Sbjct: 120 GVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTV 179

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRY-KFDHEAKLRSPSWWKRYLSQKNLEENEAARK 180
            EL RV+ +GV++FAG P    ++     KF   AK+RS SWW R+  Q NLEEN+A  K
Sbjct: 180 PELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSK 239

Query: 181 RFKKILREISYKPACQVFFLK 201
           +F++ + +  YKPACQVF LK
Sbjct: 240 KFEQAVSKGLYKPACQVFHLK 258

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BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL
Match: A0A1S3BYV5 (uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 180/202 (89.11%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           ME+ N+VEGHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAW
Sbjct: 73  MEDVNKVEGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAW 132

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           G+EPY  DSSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTI
Sbjct: 133 GLEPYGSDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTI 192

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
           FELMRVSREGVIIFAG+PDYP+SEFTR+KFD +AKLRSPSWWKRYL+QK LEENE ARKR
Sbjct: 193 FELMRVSREGVIIFAGYPDYPISEFTRFKFDRQAKLRSPSWWKRYLNQKELEENEVARKR 252

Query: 181 FKKILREISYKPACQVFFLKSG 203
           FKKILREISYKPACQ++FLKSG
Sbjct: 253 FKKILREISYKPACQIYFLKSG 274

[Close]

BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL
Match: A0A6J1D594 (uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC111017728 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.1e-73
Identity = 135/201 (67.16%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           +E+ N  EGH FCT EV+ T+PLLREVYDD M KVLYVGPDTCS++S  L  DE+DYEAW
Sbjct: 72  IEDVNTFEGHGFCTPEVEITMPLLREVYDDIMNKVLYVGPDTCSLVSGFL--DEEDYEAW 131

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GV+P+ FD++   C DL+ +GI+RVAD+KF LPY  +SFSHV++SDTLEY SSRYLNST+
Sbjct: 132 GVDPFGFDANDSDCRDLVQQGIVRVADIKFPLPYRDSSFSHVVVSDTLEYLSSRYLNSTL 191

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKR 180
            EL RVS EGVII+AG+P +PVSEFTRY    +AK RSPSWW+RYL Q+ LEEN AA+KR
Sbjct: 192 AELTRVSSEGVIIYAGYPGFPVSEFTRY--SRQAKFRSPSWWRRYLVQRKLEENVAAKKR 251

Query: 181 FKKILREISYKPACQVFFLKS 202
            KKIL++ISYKPACQ+  LKS
Sbjct: 252 LKKILKDISYKPACQILLLKS 268

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BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL
Match: A0A5D3E063 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00250 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.7e-72
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 9   GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 68
           GHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAWG+EPY  D
Sbjct: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62

Query: 69  SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 128
           SSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTIFELMRVSR
Sbjct: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122

Query: 129 EGVIIFAGHPDYPVSEFTRYKFDHEAKL 157
           EGVIIFAG+PDYP+SEFTR+KFD + ++
Sbjct: 123 EGVIIFAGYPDYPISEFTRFKFDRQVRI 150

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BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL
Match: A0A0A0L156 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179070 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 1.2e-69
Identity = 134/140 (95.71%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 9   GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 68
           GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD
Sbjct: 3   GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 62

Query: 69  SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 128
           SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR
Sbjct: 63  SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122

Query: 129 EGVIIFAGHPDYPVSEFTRY 149
           EGVIIFAG P   VS F RY
Sbjct: 123 EGVIIFAGKPLILVS-FYRY 141

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BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL
Match: A0A6J1K5Y9 (uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC111491988 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 3.6e-69
Identity = 125/198 (63.13%), Postives = 161/198 (81.31%), Query Frame = 0


Query: 4   ENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVE 63
           EN+VEGHTFCTSEVQT I LL+EVYD  M KVLYVGPDT S++ +LL  D+DDY  WG++
Sbjct: 69  ENDVEGHTFCTSEVQTIITLLKEVYDYNMNKVLYVGPDTGSVMPELL-EDKDDYVDWGMD 128

Query: 64  PYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFEL 123
           PYD D +   CWDLI + I+ V+D+KF LPY + SFSHVI+SDTLEY SSRYLN TI E 
Sbjct: 129 PYDTDGADSCCWDLIEREIVHVSDMKFPLPYREKSFSHVIVSDTLEYMSSRYLNETIPEF 188

Query: 124 MRVSREGVIIFAGHPDYPVSEFTRYKFDHEAKLRSPSWWKRYLSQKNLEENEAARKRFKK 183
           MRVSR+G++IFAGHPD+PVS+F R +++ +AKLRSPSWWK YL+Q+  +E+ AA++R   
Sbjct: 189 MRVSRDGIVIFAGHPDFPVSKFNRSRYNRQAKLRSPSWWKMYLAQRKFKEDAAAKERLNN 248

Query: 184 ILREISYKPACQVFFLKS 202
           +L++IS++PACQ+F LKS
Sbjct: 249 MLKDISFEPACQIFLLKS 265

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BLAST of CsaV3_4G014570 vs. TAIR 10
Match: AT5G65810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49720.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 218.0 bits (554), Expect = 6.9e-57
Identity = 106/201 (52.74%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           + E +++ G   CT+EVQ  IP+L+  Y D+M KVL+VGP+TCS++S LL  +E++ EAW
Sbjct: 57  IREVSKITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLL--NEEETEAW 116

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYD + +  +C  L+HKG++RVAD+KF LPY   SFS VI+SD L+Y S RYLN T+
Sbjct: 117 GVEPYDVEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTV 176

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRY-KFDHEAKLRSPSWWKRYLSQKNLEENEAARK 180
            EL RV+ +GV++ AG+P    ++     KF   AK+RS SWW R+ SQ NLEENEAA K
Sbjct: 177 PELARVASDGVVLLAGNPGQQKAKGGELSKFGRPAKMRSSSWWIRFFSQTNLEENEAASK 236

Query: 181 RFKKILREISYKPACQVFFLK 201
           +F++   + SYKPACQVF LK
Sbjct: 237 KFEQAASKSSYKPACQVFHLK 255

[Close]

BLAST of CsaV3_4G014570 vs. TAIR 10
Match: AT3G49720.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 103/201 (51.24%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           ++E ++V G   CT+EVQ  IP+L++ Y D M KVL+VGPDTCS++S LL   E++ EAW
Sbjct: 60  IKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL--KEEETEAW 119

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYD + +  HC   + KG++RVAD+KF LPY   SFS VI+SD L+Y S +YLN T+
Sbjct: 120 GVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTV 179

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRY-KFDHEAKLRSPSWWKRYLSQKNLEENEAARK 180
            EL RV+ +GV++FAG P    ++     KF   AK+RS SWW R+  Q NLEEN+A  K
Sbjct: 180 PELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSK 239

Query: 181 RFKKILREISYKPACQVFFLK 201
           +F++ + +  YKPACQVF LK
Sbjct: 240 KFEQAVSKGLYKPACQVFHLK 258

[Close]

BLAST of CsaV3_4G014570 vs. TAIR 10
Match: AT3G49720.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, Golgi apparatus, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 210.7 bits (535), Expect = 1.1e-54
Identity = 103/201 (51.24%), Postives = 140/201 (69.65%), Query Frame = 0


Query: 1   MEEENEVEGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAW 60
           ++E ++V G   CT+EVQ  IP+L++ Y D M KVL+VGPDTCS++S LL   E++ EAW
Sbjct: 60  IKEVSKVTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL--KEEETEAW 119

Query: 61  GVEPYDFDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTI 120
           GVEPYD + +  HC   + KG++RVAD+KF LPY   SFS VI+SD L+Y S +YLN T+
Sbjct: 120 GVEPYDIEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTV 179

Query: 121 FELMRVSREGVIIFAGHPDYPVSEFTRY-KFDHEAKLRSPSWWKRYLSQKNLEENEAARK 180
            EL RV+ +GV++FAG P    ++     KF   AK+RS SWW R+  Q NLEEN+A  K
Sbjct: 180 PELARVASDGVVLFAGLPGQQRAKVAELSKFGRPAKMRSASWWNRFFVQTNLEENDAPSK 239

Query: 181 RFKKILREISYKPACQVFFLK 201
           +F++ + +  YKPACQVF LK
Sbjct: 240 KFEQAVSKGLYKPACQVFHLK 258

The following BLAST results are available for this feature:

BLAST of CsaV3_4G014570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654354.1	7.6e-114	100.00	probable pectin methylesterase CGR3 [Cucumis sativus]	[more]
KAE8649381.1	7.6e-114	100.00	hypothetical protein Csa_011838 [Cucumis sativus]	[more]
XP_008454502.1	2.5e-101	89.11	PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo]	[more]
XP_038905892.1	3.7e-92	82.18	probable pectin methylesterase CGR3 [Benincasa hispida]	[more]
XP_022149264.1	6.5e-73	67.16	uncharacterized protein At3g49720-like [Momordica charantia] >XP_022149265.1 unc...	[more]

BLAST of CsaV3_4G014570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WPN7	9.8e-56	52.74	Probable pectin methylesterase CGR3 OS=Arabidopsis thaliana OX=3702 GN=CGR3 PE=2...	[more]
Q9M2Y6	1.6e-53	51.24	Probable pectin methylesterase CGR2 OS=Arabidopsis thaliana OX=3702 GN=CGR2 PE=2...	[more]

BLAST of CsaV3_4G014570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYV5	1.2e-101	89.11	uncharacterized protein At3g49720-like OS=Cucumis melo OX=3656 GN=LOC103494900 P...	[more]
A0A6J1D594	3.1e-73	67.16	uncharacterized protein At3g49720-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A5D3E063	7.7e-72	88.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L156	1.2e-69	95.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G179070 PE=4 SV=1	[more]
A0A6J1K5Y9	3.6e-69	63.13	uncharacterized protein At3g49720-like OS=Cucurbita maxima OX=3661 GN=LOC1114919...	[more]

BLAST of CsaV3_4G014570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65810.1	6.9e-57	52.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G49720.1	1.1e-54	51.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G49720.2	1.1e-54	51.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 24..195 e-value: 1.4E-7 score: 33.1
None	No IPR available	PANTHER	PTHR34208:SF10	PECTIN METHYLESTERASE CGR3-RELATED	coord: 5..201
IPR044689	Pectin methyltransferase CGR2/3	PANTHER	PTHR34208	S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 5..201
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 85..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G014570.1	CsaV3_4G014570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045488	pectin metabolic process
molecular_function	GO:0008168	methyltransferase activity