CsaV3_4G010580 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G010580
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	60S ribosomal protein L6
Location	chr4: 8462992 .. 8465386 (+)
RNA-Seq Expression	CsaV3_4G010580
Synteny	CsaV3_4G010580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCTAAAAATTTAGTATAAATAATGTAGAAGATTTTGTTCTATATCCCATTTTTAATGGAAAAAATAAGGACGATTTTGCTAAAATTCAAACTATGTGAGTCGAGATTGGACGAAAGTTGACGTGAAATAAACGGGGCCTTCCAGTGTAATGGGCGTATAAACCCCTAAAATTTAATAATTTAACCCTTAATTTTCTCTCTAGGGCTTTTGGCGAGTAGAGGAACGAAGGCGACGGTGCCAAATTCTCAGAAGTTCATCAATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTTCATCTCTCTCGATCTTCTTTCTTTCGATGCTATGTTTTTACTCAATGTCTTGGAATCCATATTGCTTTCTGAGGAATTGGAGTAATTAGAGTCCATGCTGTAGCTATGGAGAAGCGGGAATTTCTGAAGAGAGATTAGTTTTACACTTGATTTAAGTTTTGGGTTTCGAATTGGGTGATCTGAAGTGAATTTTTGCTCATTTTTCTATTAAGCAATATTTGGTTCTGGGGGTGTGTTCATCTAACTTAGTTTCGTTGATTTTTATACTATTTACAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGTGTGTTTTGATGAATCTCTAATTGTCTGTCTTTATAAATTTTGTTTTGTTATCAAAAAGTGTTGGGGATTCTGTTCATGGGGTTAGTTTTTGTTTTTCCACATTCTTTGTGGACTTGTGTTAGATTTGCATTGGAAGTCTTATTTATGATATCTTAGCATCATAACAGTTATTTGCCTTAGGTTTACATATTATCTCAAATGCGTTACCTGCATAACAAGAAGGAAGAAGTTGGATACTTTGGGTTTTACATTTTGACAGTATTAATTGTTGAACCTCGAAAGCAGTTAATATTGAAATGTCTCACGTCTTGTATTCTGCCCATTTCTCCGGCCAATCGACTTTACATACCACTGAAATGCCTCATGCTTCCTTTTATGAATATATGCCCTGCTAATGGTCTTTTCATCCCATAAGTTTCTAAGCTTTATGTGCATTATCTTCTATTGTTTTCTTATGATGGTTGTGGGTACGGGTAGGGGTTAGTGTCTGAGTAGTCCTACATGTTTAGGAGAAAGGATGTATATAAAATAGTGATTGGCGGAGGCTATTGATTTCAAATTAGCAATTCTTGAACCTGCTAAGGATTATCTTAATTTGATTTTTGTCATTTTAGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTACTCATCCTGTTTTTGATTTGTCCAAATAGTTTAAAGTTTTATCATTTCTTTGTCCTGATTTGAGGTTGCCATTGTTACATGCAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAGATATTTTCTGTGTGGTTTCTGATACGCCTCTTGGGGAATTTGATCCCTATAATCTTCTTGTTCATGTTTTGTTATGAGGGTTGTAGATTTGAAATTATGTCTCGCAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTACATTACGTGGCTTCCTTTGACTGGTGAGAGTGATAAGACATGTAATTTTTGTTCAATTTCTGGCTGGTGAAATACTTGAGAAACACATTGATAAAGATAGATCGGTTGACTTACAATGGTGCATGGCCATGTTTGATTAGTATGCAACGTCAGAGAGTGGGCAATGTATGCTTGAATCTCATATATTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATATTTTCTTCTCTGCCCTTCACTTGTTTATCATATGATAATAATTTTACTGTTGGCATGTATGGAGCGATCTTGAAAAAATTAAAATCACTTTTG

mRNA sequence

ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Coding sequence (CDS)

ATGGCTCCGAAGACAGCAAGAGTTAGCAGAAATCCTGAACTCATTCGAGGGGTTGGCAAATACTCGAGGTCGAAGATGTACCACAAGCGTGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTCTTCCCTCGCCATGATGCCAAGCCTAAGGCAGATTCTCCTGCTGAGAAGCCGCCCAAATTTTACCCAGCCGATGATGTCAAGAAACCACTTGTTAACAAGCGCAAACCCAAGCCCACCAAACTTAGGTCCAGCATTACTCCTGGAACCGTGCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGAGTTGTGTTCTTGAAGCAACTTCCGTCTGGGCTGCTTTTAGTGACTGGGCCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTGCAGGGGTCAATGTGGAGAAATTTGGTGACAAATATTTCTCCAAGGAAGTTCATCAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAAGTGCGCTCCCACAGGAGAAAAAGGATGACCAGAAGGCCGTGGACTCGGCTCTGCTAAAGTCCATTGAGGCAGTCTCAGACTTGAAGACATACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAGCCACATGAGCTTGTTTTCTAG

Protein sequence

MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF*

Homology

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_004150161.2 (60S ribosomal protein L6-1 [Cucumis sativus] >KAE8649348.1 hypothetical protein Csa_015063 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_008460790.1 (PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0063110.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa] >TYK00166.1 60S ribosomal protein L6-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-117
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 431.0 bits (1107), Expect = 6.4e-117
Identity = 223/231 (96.54%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAD+PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 427.2 bits (1097), Expect = 9.2e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D+PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 426.4 bits (1095), Expect = 1.6e-115
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 6.0e-102
Identity = 186/230 (80.87%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 2   APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 61
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQEKK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.7e-101
Identity = 188/224 (83.93%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 8   VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADD 67
           VSRNPEL+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRKPKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKF DKYF K+  +K KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 EKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

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BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-100
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.3e-100
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 124/257 (48.25%), Postives = 161/257 (62.65%), Query Frame = 0


Query: 3   PKTAR--VSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADS------ 62
           PK A+   SRNP L+RG+G+YSRS MY ++ L+  K K      + + K K +       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 63  --------------PAEKPPKFYPADDVKKPLVNKRKPKP-----TKLRSSITPGTVLII 122
                            K P++YP +DV + L++  K KP      +LRSSITPGTVLII
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLII 163

Query: 123 LTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEK-F 182
           LTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDI+ V + K  
Sbjct: 164 LTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHL 223

Query: 183 GDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYL 232
            D YF K+  +K +  EGE F+ EK EK  + +++K DQKAVD  +L  I+AV  L+ YL
Sbjct: 224 TDAYFKKKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYL 283

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL
Match: A0A0A0KYA4 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.3e-122
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP
Sbjct: 54  MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 113

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 114 KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 173

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE
Sbjct: 174 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 233

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 234 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 284

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL
Match: A0A5D3BPH9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00620 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL
Match: A0A1S3CD97 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499552 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGG+FPRHDAKPKADSPAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGIFPRHDAKPKADSPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPA DVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPAVDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFHDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQVKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.5e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK D+PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 7.6e-116
Identity = 220/231 (95.24%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60
           MAPKTARVSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA++PAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           EKSALPQ+KKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of CsaV3_4G010580 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 371.7 bits (953), Expect = 4.3e-103
Identity = 186/230 (80.87%), Postives = 207/230 (90.00%), Query Frame = 0


Query: 2   APKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPK 61
           A +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK D+P EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RKPKPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKF DKYF K   +KKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
           K  +PQEKK+DQK VD+AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of CsaV3_4G010580 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 365.9 bits (938), Expect = 2.4e-101
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +T +V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of CsaV3_4G010580 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 365.9 bits (938), Expect = 2.4e-101
Identity = 185/228 (81.14%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 4   KTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFY 63
           +TA+V+RNP+LIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K D+P EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R  KP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKS 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KF DKYF K   +KKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 232
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of CsaV3_4G010580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150161.2	1.9e-121	100.00	60S ribosomal protein L6-1 [Cucumis sativus] >KAE8649348.1 hypothetical protein ...	[more]
XP_008460790.1	3.7e-117	97.40	PREDICTED: 60S ribosomal protein L6-1-like [Cucumis melo] >KAA0063110.1 60S ribo...	[more]
XP_038880885.1	6.4e-117	96.54	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_022935449.1	9.2e-116	95.24	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_004149609.1	1.6e-115	95.24	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]

BLAST of CsaV3_4G010580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	6.0e-102	80.87	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
P34091	6.7e-101	83.93	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q9C9C6	3.3e-100	81.14	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	3.3e-100	81.14	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P47911	1.9e-47	48.25	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of CsaV3_4G010580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYA4	9.3e-122	100.00	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1	[more]
A0A5D3BPH9	1.8e-117	97.40	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CD97	1.8e-117	97.40	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103499552 PE=3 SV=1	[more]
A0A6J1F5G0	4.5e-116	95.24	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	7.6e-116	95.24	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]

BLAST of CsaV3_4G010580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	4.3e-103	80.87	Ribosomal protein L6 family protein	[more]
AT1G74050.1	2.4e-101	81.14	Ribosomal protein L6 family protein	[more]
AT1G74060.1	2.4e-101	81.14	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 5.8E-15 score: 55.3
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 1.1E-16 score: 62.5
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..231 e-value: 2.4E-39 score: 134.3
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..84
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..231
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..231 e-value: 4.82257E-81 score: 237.446
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G010580.1	CsaV3_4G010580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome