
CsaV3_4G007200 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGGTTGGTTGGAACTCTCTTTTGACAAGAAGATCCCTGCTCCTTGCAAGATCGATTCTTGACCAGAGTACTTATTCTCCTGAGTAGAGTAGATTGGAGAGAGGCTGTATAATGTATTTGGCACTGATTGGTCAGTGGCCCTTTAATCTTATCGGAGTTCTTTTGTACTTCTTATTTTCTGTGGACTACTTCTAAAATATTTTCTTAACTATTTCTGGCAAAATGTTTGTCCTACTAGAGGTCTGTCGTGCTTTTACGACTCAGTCTTAGTTATCTCCTCATCTCTTGTAGTTTCAGGAAAGTACTTGTCACAGATCAAGTCCTTAAATTATACCTCTAGTGATTAGTATTCTCGTCATGTATTGTGGTACAGGGGTTGCACTCCTCCACTTAGTTAAGGATCTGGCTTGTACCACTTGTTTGGTCTAATGGCTTGAGCATCGTTTGCTTAGAAATAGGCTAATGGGGAACATCCTGTTCCAATAGTAGCTAAACATTTAACTTCATGTAAAACAATGATGTTGATGTGTAGCATGACTATTGCATATCTCACGATGGAGCAAGATAATCAAGTTGCTGGGCTTAATGATCAATTTTATTTTTCATTGACAAACAGTCTGCAGGGAGTCTATTCTGCATTAATTTAAGTTGAATTAGAACTTAGAACTTTCAATCATATCTGACGTTTGGGATCTCTGTAAAGGACCCTAGATGGAGAAAGCAGGTGGTTGACAGGCTGTTTCAAAGGCAGAAGCTAGGTTATTTATTATTATTTTTAGGACAATGAATGCATTAGTTTAAATGTGCCTCTTAGGTTCCCATACCATAGAAGTGTTTGAAATGCTGTCACACATGCTAAGGATATGCTGTAAAAGGGCTATGGACATTGGACCTATGGCAAACAAGAAAATATATGAAAGCTAAAAACTTGATTTACAGTCCCAATTAGATGAGGAAAATATTTCAAGTAGCAGTAGGAATCTCAAAATTTGACATTTATGGAATGGTAACTCACAATTTTTAGTTCATTACAAAATAAAGACCTGAAGTGAGAGAGAAAGTTACCTGTTAAACCATTTAAGAGAGACTTTGCTTGTAAACATTTGTATGGCTTAATCATTCACGCGTGTCTATAACTTCTATTGATCAACACCAGCATTTTGATTTGTATAACTAATGTGTGACCTTTTTGCTTCAGTGATAAATTTTTTTTGGCTATCTTGTTTCATGTGTGAGGAGCTGCTTCGTTTCTCTTGTAACTTATTATTTTTTTTTGTATAATCAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG ATGCTAGGGTTGTTTTCCGCTGCTGCGGTTCCTGGGTTTGGAGCCTTTTGGCTTGATGTTGCCATTGACTGGAGCAAAAGTCAAATAGGGACTTCAATAGCACATTATTGCATGCAGATTCTAACTAATGGGAAGTGCAAGAGTGCGGAACATAGGGTGATTACAAATTCTAGCAGGGCAAGACTCTCGATTTCTGCTTTTCATGATCCGCCGAAGACAGTAAAAATATCCCCTGCTGCAGAACTTGTTAGTGAGTCCTCCCCCCTTAGATATCGCGAAGTTATTTATGGAGATTATACATCATCATGGTACTCGAACGGCCCTGAAGGAAGAAGAAATCTGGATGCAGTCAAGCTTCACAACTAG MLGLFSAAAVPGFGAFWLDVAIDWSKSQIGTSIAHYCMQILTNGKCKSAEHRVITNSSRARLSISAFHDPPKTVKISPAAELVSESSPLRYREVIYGDYTSSWYSNGPEGRRNLDAVKLHN* Homology
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: KAE8649226.1 (hypothetical protein Csa_014558 [Cucumis sativus]) HSP 1 Score: 249.2 bits (635), Expect = 1.8e-62 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_004147727.1 (probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1 [Cucumis sativus] >XP_011653246.1 probable 2-oxoglutarate-dependent dioxygenase ANS isoform X1 [Cucumis sativus]) HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: KAA0045007.1 (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 168.7 bits (426), Expect = 3.1e-38 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: TYK16466.1 (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38 Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. NCBI nr
Match: XP_008451879.1 (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 5.9e-37 Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy Swiss-Prot
Match: Q9LE86 (Scopoletin 8-hydroxylase OS=Arabidopsis thaliana OX=3702 GN=S8H PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy Swiss-Prot
Match: G9M9M0 (Feruloyl CoA ortho-hydroxylase F6H1-1 OS=Ipomoea batatas OX=4120 GN=F6H1-1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy Swiss-Prot
Match: G9M9M1 (Feruloyl CoA ortho-hydroxylase F6H1-2 OS=Ipomoea batatas OX=4120 GN=F6H1-2 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy Swiss-Prot
Match: G9M9M2 (Feruloyl CoA ortho-hydroxylase F6H1-3 OS=Ipomoea batatas OX=4120 GN=F6H1-3 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10 Identity = 30/83 (36.14%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy Swiss-Prot
Match: O80449 (Jasmonate-induced oxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=JOX4 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.9e-10 Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy TrEMBL
Match: A0A0A0L036 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G056660 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.8e-39 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy TrEMBL
Match: A0A5A7TSZ2 (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G003180 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy TrEMBL
Match: A0A5D3D1B1 (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G002670 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.4e-38 Identity = 81/84 (96.43%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy TrEMBL
Match: A0A1S3BTN2 (1-aminocyclopropane-1-carboxylate oxidase 5 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493039 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.8e-37 Identity = 79/83 (95.18%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. ExPASy TrEMBL
Match: A0A6J1JAE5 (probable 2-oxoglutarate-dependent dioxygenase ANS OS=Cucurbita maxima OX=3661 GN=LOC111483171 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 6.3e-37 Identity = 77/83 (92.77%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR 10
Match: AT4G16330.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 6.1e-24 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR 10
Match: AT4G16330.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 107.8 bits (268), Expect = 6.1e-24 Identity = 48/79 (60.76%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR 10
Match: AT3G21420.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR 10
Match: AT3G12900.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 2.0e-11 Identity = 30/78 (38.46%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CsaV3_4G007200 vs. TAIR 10
Match: AT2G38240.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11 Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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