CsaV3_4G004690 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAAGAGCACGTTGTAACATTAATGTCTCACACAAATCCAAGTTCCCAATCTTCAAAACTCCCCTTTTAAATATGAATAAACCATTGGAAATCTGAGACCTTGCCCCCTTTAATCTTTCTTTTCATTCTTCTTCCTAATCATGCCTACTTCTACTCTTTTCAAGTTATTGATTGGTGTTTGTTTTCTCGTGCTTCTTCACGGCCTTCCTGCCTCCGCGCAGCTTTTCGTCGTCAATGGTTGTGTCTACTGCGACACTTGTCGGTGTGGTTTCGAGACAAACGTCTCCACTCCCATTTCTGGTAATGCTTCTTTTATGTCTCTGTTTGTAATGCTTCTTTTATATTTCTGTTTGTAATGCTTCTCTTTTATAACAAGTAATGAAATGGACGATTGTTTTACTAGAAAATTAATCAATGAAATGAAACAGGTGCAAAAGTGAGGTTGGAGTGTAGAGATAGAGCCACATGGGTGTTGAAGTTCACCAAAGAAGCTATTACCGATTCTAAAGGAAAATACAAAATCAATGTGTATGAAGACCACAAGGATGAGAGTTGTAAGGTAGTTCTTGTGAGTAGTCCTCATCTTGGGTGCAACCGTCCCGATGTAGGTCGAAACAGTGCTACTGTCATTCTCACCAACAACAATGGCCTCACTAGCATCTTCCGCTATGCAAATGCAATGGGCTTCCTGATCCGACGTCCTCTTGCTTTCTGCCCCACAATTCTCAAACAATATCTCGACTTCGATGAGTCGTTGTGAAAGCGTTGTCTTTCGCTTAACGGTTTCTAATATATATATATATCTAGCTATTAGAAATAGTGATTTGAGAAAAATAAAGTTGTTAAGCTCACTACAAAGGATTGGTTTTTCAGGGTTTGATTTCTTTGATGCATTGCGCTATAGTTTTCTTTCTTCTTCTTCTTTTTAACTACTTGTTGGAAAATGGATATGATGATAATAATGTATTAACCTCTTGTTAAATTAGCTTGAGTTCCATGCATTTTCTTGAAAGCTCGAGTATTTACTTTTTAATGTTTTACTTAGTTTGAGGTTATGTATTTAAATTGTCCAAAGCATATAAATTCAATAAATAGTTTTTTTTTCTTCGTATGGTCA ATGCCTACTTCTACTCTTTTCAAGTTATTGATTGGTGTTTGTTTTCTCGTGCTTCTTCACGGCCTTCCTGCCTCCGCGCAGCTTTTCGTCGTCAATGGTTGTGTCTACTGCGACACTTGTCGGTGTGGTTTCGAGACAAACGTCTCCACTCCCATTTCTGGTGCAAAAGTGAGGTTGGAGTGTAGAGATAGAGCCACATGGGTGTTGAAGTTCACCAAAGAAGCTATTACCGATTCTAAAGGAAAATACAAAATCAATGTGTATGAAGACCACAAGGATGAGAGTTGTAAGGTAGTTCTTGTGAGTAGTCCTCATCTTGGGTGCAACCGTCCCGATGTAGGTCGAAACAGTGCTACTGTCATTCTCACCAACAACAATGGCCTCACTAGCATCTTCCGCTATGCAAATGCAATGGGCTTCCTGATCCGACGTCCTCTTGCTTTCTGCCCCACAATTCTCAAACAATATCTCGACTTCGATGAGTCGTTGTGA ATGCCTACTTCTACTCTTTTCAAGTTATTGATTGGTGTTTGTTTTCTCGTGCTTCTTCACGGCCTTCCTGCCTCCGCGCAGCTTTTCGTCGTCAATGGTTGTGTCTACTGCGACACTTGTCGGTGTGGTTTCGAGACAAACGTCTCCACTCCCATTTCTGGTGCAAAAGTGAGGTTGGAGTGTAGAGATAGAGCCACATGGGTGTTGAAGTTCACCAAAGAAGCTATTACCGATTCTAAAGGAAAATACAAAATCAATGTGTATGAAGACCACAAGGATGAGAGTTGTAAGGTAGTTCTTGTGAGTAGTCCTCATCTTGGGTGCAACCGTCCCGATGTAGGTCGAAACAGTGCTACTGTCATTCTCACCAACAACAATGGCCTCACTAGCATCTTCCGCTATGCAAATGCAATGGGCTTCCTGATCCGACGTCCTCTTGCTTTCTGCCCCACAATTCTCAAACAATATCTCGACTTCGATGAGTCGTTGTGA MPTSTLFKLLIGVCFLVLLHGLPASAQLFVVNGCVYCDTCRCGFETNVSTPISGAKVRLECRDRATWVLKFTKEAITDSKGKYKINVYEDHKDESCKVVLVSSPHLGCNRPDVGRNSATVILTNNNGLTSIFRYANAMGFLIRRPLAFCPTILKQYLDFDESL* Homology
BLAST of CsaV3_4G004690 vs. NCBI nr
Match: XP_011653120.1 (major pollen allergen Lol p 11 [Cucumis sativus] >XP_031739763.1 major pollen allergen Lol p 11-like [Cucumis sativus] >XP_031745657.1 major pollen allergen Lol p 11-like [Cucumis sativus] >XP_031745706.1 major pollen allergen Lol p 11-like [Cucumis sativus] >KAE8637158.1 hypothetical protein CSA_004640 [Cucumis sativus] >KAE8637167.1 hypothetical protein CSA_018798 [Cucumis sativus] >KAE8637229.1 hypothetical protein CSA_021624 [Cucumis sativus] >KGN53218.1 hypothetical protein Csa_014960 [Cucumis sativus]) HSP 1 Score: 338.6 bits (867), Expect = 3.1e-89 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. NCBI nr
Match: XP_008453801.1 (PREDICTED: major pollen allergen Lol p 11-like [Cucumis melo] >KAA0036013.1 major pollen allergen Lol p 11-like [Cucumis melo var. makuwa] >TYK16748.1 major pollen allergen Lol p 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83 Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. NCBI nr
Match: XP_038899356.1 (major pollen allergen Lol p 11-like [Benincasa hispida]) HSP 1 Score: 288.1 bits (736), Expect = 4.7e-74 Identity = 138/163 (84.66%), Postives = 147/163 (90.18%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. NCBI nr
Match: KAG6600638.1 (Protein DOWNSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031274.1 Protein DOWNSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.4 bits (625), Expect = 3.5e-61 Identity = 118/160 (73.75%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. NCBI nr
Match: XP_022941733.1 (protein DOWNSTREAM OF FLC-like [Cucurbita moschata]) HSP 1 Score: 245.4 bits (625), Expect = 3.5e-61 Identity = 118/160 (73.75%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy Swiss-Prot
Match: Q9LX15 (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 4.1e-28 Identity = 68/149 (45.64%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy Swiss-Prot
Match: Q29W25 (Pollen allergen Cro s 1 OS=Crocus sativus OX=82528 PE=1 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26 Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy Swiss-Prot
Match: Q8LGR0 (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 8.5e-26 Identity = 65/153 (42.48%), Postives = 88/153 (57.52%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy Swiss-Prot
Match: P33050 (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 8.5e-26 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy Swiss-Prot
Match: Q6NMJ2 (Pollen-specific protein-like At4g18596 OS=Arabidopsis thaliana OX=3702 GN=At4g18596 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy TrEMBL
Match: A0A0A0KUJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G028420 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 1.5e-89 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy TrEMBL
Match: A0A5A7SZE2 (Major pollen allergen Lol p 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005880 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84 Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy TrEMBL
Match: A0A1S3BYB8 (major pollen allergen Lol p 11-like OS=Cucumis melo OX=3656 GN=LOC103494419 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84 Identity = 153/163 (93.87%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy TrEMBL
Match: A0A6J1FSY1 (protein DOWNSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111447011 PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.7e-61 Identity = 118/160 (73.75%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. ExPASy TrEMBL
Match: A0A6J1J4Q1 (major pollen allergen Lol p 11-like OS=Cucurbita maxima OX=3661 GN=LOC111481731 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 8.5e-61 Identity = 117/160 (73.12%), Postives = 134/160 (83.75%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. TAIR 10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 130.6 bits (327), Expect = 1.2e-30 Identity = 73/154 (47.40%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. TAIR 10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 125.9 bits (315), Expect = 2.9e-29 Identity = 68/149 (45.64%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. TAIR 10
Match: AT5G45880.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28 Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. TAIR 10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 64/154 (41.56%), Postives = 91/154 (59.09%), Query Frame = 0
BLAST of CsaV3_4G004690 vs. TAIR 10
Match: AT4G18596.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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