CsaV3_4G003560 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G003560
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	SANTA domain-containing protein
Location	chr4: 2156507 .. 2159105 (-)
RNA-Seq Expression	CsaV3_4G003560
Synteny	CsaV3_4G003560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATTTAGAAGAGTATGAATAGTTTTGAGTGTATTTGGAAATAGGCAATAAAAAGGTGAGGAAACGAGAAAAATGGTATCTTCTCTTCGCCTTCCCGCCTAATCGGTCATCATGGCCACCAGACCAAGAGGAATTCGAAGCTCCGCCTCTGCTACTCCCTCCTCCGTTCCCTTCAAGACCGACCGGAAGCCCACTGCCACTCCCACGACGCCAAAAACTCCGGCTACCTGTTCTACATCCATCATTCCTTCCTCACTCAAATCAGTACGTTTTTCTTCCATTTCTCACTCCAGTACATCACTTTCTCATATCTGATTGTTGGTTTTCACATTTTCTGTGTTTTCTCTCTCGCTTAGATTTTTCTGTACGATTGGTGGCTGGTAAAGGCTAACGATGGTGAGGGATTGGCTATCGGAGGCTTTGCATCCAGAGAGTAAGACATTGCTTCCCTTGTTTTGTTTGTTTTCTGTTTGTTCTTTGAAGAAATATGTTTGAGTGACTAAGTTTTGTTCCAGAAGATAGATTATTCACTGTTTATCTTTATTCTAATATTTGATATTAAAGTGAATTTGGGGAAGTTTTGAAATTTGATTGAAATCTTCTCAATAACCCACTATATAAAAGAAGATTTAACATGTATTTTACTTTTAACTAAGATAAGTATTTTAGTTGGATTTAGTTATCTTAGTTTTTGATACTGAAATTCATCCATGAAGAGTCTGCCATTATGTAAATGAGGGTTAAAATATTTGTCTTAGTTCTTGTATTTTTAACTAAGATACTCGGTGATTTTATGGGGAGTATCTTTAGTGTTTTTGGTTATCATTGGGTACAAAATTATTAACTGGTGTTGGTATCCTGACCATAAAAAACTCCAATTGGTTTCAGCTTTCAAATTCTAGAAAGCTCATAGGGATGAAAGAAGTTAATAAAACTGGAGGATAAAGGAGGTGATAAAATCTGCTGAAGGAGAAAAAGTGAAGCAGTTCGCTCTTTATAAATTAATTCCAAGTGGGAGAAATTTAATAAATGACTGATCTTCCTTTCATTGGTCTGATTGCGTAGAAGGAAAATAGTTTTCATTCTCATATACTGTATATTAAGTCTGTCCTCTTCTAGAATGGGAATTATTGCTCTGTGCTCAAGAAAAATTATGATCCATTGTTTCAGGAGATCTGGGATAAGAGCATTTTATTCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAACCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACATGAAAACGGCTTTCCACCAAAGGTATGTTTGCAGGGCATTGTTCTTATTTCACCTAACTTTCTGTTTGTGTCATTGCCGTTGGATGAACTATTTTGTTAAACATATCATGTCCTGAGCATTATTGCAAGTATTTTAGAAACTGAGGAAAGTTCATGACATGCAACTTGAGCAGGTGTACAATCATTTCCTTCTTGGCTTTCCCTTCAATTGGAAAGACTATATGAGTTCTGGTTCGATTAGAAAATCCACTGTCGAGTTTTTTAAAGCGAGTACTTCTCGTTCCAACGACCAAGGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAGTAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAGTCTAGTCATGGTCATGACCTCTTTATGAAGAACTCAAATTCTAGTTGTTGTCCAACACAAAGTTTCTCGAATGAGGGGAAGAATGATGATGTAATAAAGGATTCATTGCACGCTAGACAAGAAGCTAAGAAGTTGGATATCGACCTCCAGATTCGAAGAGGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAATAGAAGTAAAGAGAGTCTCATATCAGATTCTCGGAAGAAGAAAAAGAGTAGAAAATAGCTCATGAAAATTCGGGAAAGGGAAATAAACAGAGAATTAGAAGTAGTTCAGATATTTTACTACATCTAACAAGGAAGTTGATGAATCACAGATGAGAGGAGAATATCAAATCTTAGGCAAAGGAACTGAAAGGAGAATCAATAGATGGAGTAGAAAATCAAATTTTCGTGTGCAATGTTCACAATCACTCCCTTAATGATCGATATCCAAAGGAAGTATGTACTTTTTTTTGTACCTTGTGTATGTAAAATGTTTCTAGTGTCCATATGATGAGACAGTCATCAAATTGCTCGAGGGAGGATTGTGTCCTTCAAGGGATAAACAAAGCTGGGAATCTTCTTTGAAGAAAAAATAGGTCATTTTAGATTATGGAAAAGCCTTCCTTAGAAGAAGAGCTTTCTTGTTTTCATTTCTTCTTTCTCTTTTACTTTGATTTGTGTGAGATGACGTTTTGTATACGGATGATGGTTGTTCTCTTTGAACATCATATGGAATGGAATTAAGACTTGAACCATCAAACCAAATTTCTTTTTAGAGATCCACATTAAACATTAAACCAATAATATAAAAATGCAAATCATTTTGGAGTCTATTTGGTAAACAATTTGAGTTTTGGATTTGTCAATATTTTTAGAAGTTGTCATCAGAGGTTATAAATAA

mRNA sequence

ATGGCCACCAGACCAAGAGGAATTCGAAGCTCCGCCTCTGCTACTCCCTCCTCCGTTCCCTTCAAGACCGACCGGAAGCCCACTGCCACTCCCACGACGCCAAAAACTCCGGCTACCTGTTCTACATCCATCATTCCTTCCTCACTCAAATCAATTTTTCTGTACGATTGGTGGCTGGTAAAGGCTAACGATGGTGAGGGATTGGCTATCGGAGGCTTTGCATCCAGAGAGAGATCTGGGATAAGAGCATTTTATTCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAACCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACATGAAAACGGCTTTCCACCAAAGGTGTACAATCATTTCCTTCTTGGCTTTCCCTTCAATTGGAAAGACTATATGAGTTCTGGTTCGATTAGAAAATCCACTGTCGAGTTTTTTAAAGCGAGTACTTCTCGTTCCAACGACCAAGGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAGTAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAGTCTAGTCATGGTCATGACCTCTTTATGAAGAACTCAAATTCTAGTTGTTGTCCAACACAAAGTTTCTCGAATGAGGGGAAGAATGATGATGTAATAAAGGATTCATTGCACGCTAGACAAGAAGCTAAGAAGTTGGATATCGACCTCCAGATTCGAAGAGGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAATAGAAGTAAAGAGAGTCTCATATCAGATTCTCGGAAGAAGAAAAAGAGTAGAAAATAG

Coding sequence (CDS)

ATGGCCACCAGACCAAGAGGAATTCGAAGCTCCGCCTCTGCTACTCCCTCCTCCGTTCCCTTCAAGACCGACCGGAAGCCCACTGCCACTCCCACGACGCCAAAAACTCCGGCTACCTGTTCTACATCCATCATTCCTTCCTCACTCAAATCAATTTTTCTGTACGATTGGTGGCTGGTAAAGGCTAACGATGGTGAGGGATTGGCTATCGGAGGCTTTGCATCCAGAGAGAGATCTGGGATAAGAGCATTTTATTCTGCAGCGATTTCTAAGAGACATGAAACTACTATTCTTGAGGCAACCGATGGCATTATCATTTCAATCAGTGGCTTCATAAATAGACCACGAACACATGAAAACGGCTTTCCACCAAAGGTGTACAATCATTTCCTTCTTGGCTTTCCCTTCAATTGGAAAGACTATATGAGTTCTGGTTCGATTAGAAAATCCACTGTCGAGTTTTTTAAAGCGAGTACTTCTCGTTCCAACGACCAAGGTACAAGTCATTATTTAGAACCTGACTTGGATAATCTTGCAGTAACTAGGTTGCGAGATCTCTGTTTGTCCACTTATGGAGAGTCTAGTCATGGTCATGACCTCTTTATGAAGAACTCAAATTCTAGTTGTTGTCCAACACAAAGTTTCTCGAATGAGGGGAAGAATGATGATGTAATAAAGGATTCATTGCACGCTAGACAAGAAGCTAAGAAGTTGGATATCGACCTCCAGATTCGAAGAGGACAAGGTGTTTGTACAAGAAGCATGACAAAGTTGAAAAATACTAGGAATAGAAGTAAAGAGAGTCTCATATCAGATTCTCGGAAGAAGAAAAAGAGTAGAAAATAG

Protein sequence

MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLVKANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAVTRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK*

Homology

[Close]

BLAST of CsaV3_4G003560 vs. NCBI nr
Match: XP_004152288.1 (uncharacterized protein LOC101215879 [Cucumis sativus] >KAE8649115.1 hypothetical protein Csa_014544 [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 5.2e-153
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV
Sbjct: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN
Sbjct: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120

Query: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180
           GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV
Sbjct: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180

Query: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDSLHARQEAKKLDI 240
           TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDSLHARQEAKKLDI
Sbjct: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDSLHARQEAKKLDI 240

Query: 241 DLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK 282
           DLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK
Sbjct: 241 DLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK 281

[Close]

BLAST of CsaV3_4G003560 vs. NCBI nr
Match: XP_008453958.1 (PREDICTED: uncharacterized protein LOC103494524 isoform X1 [Cucumis melo])

HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-122
Identity = 242/304 (79.61%), Postives = 250/304 (82.24%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           M TRPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLV
Sbjct: 1   MGTRPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGF SRER+GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT EN
Sbjct: 61  KANDGEGLAIGGFTSRERAGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLEN 120

Query: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180
           GFPPKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+
Sbjct: 121 GFPPKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAI 180

Query: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFS 240
           TRLRDLCLSTYGESSHGH L  KNSNSS  PT                        QSFS
Sbjct: 181 TRLRDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFS 240

Query: 241 NEGKNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKK 281
           NEGKN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKK
Sbjct: 241 NEGKNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKK 300

[Close]

BLAST of CsaV3_4G003560 vs. NCBI nr
Match: KAA0044617.1 (mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 444.5 bits (1142), Expect = 6.8e-121
Identity = 240/301 (79.73%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 4    RPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLVKAN 63
            RPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLVKAN
Sbjct: 706  RPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLVKAN 765

Query: 64   DGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFP 123
            DGEGLAIGGF SRER+GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT ENGFP
Sbjct: 766  DGEGLAIGGFTSRERAGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLENGFP 825

Query: 124  PKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAVTRL 183
            PKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+TRL
Sbjct: 826  PKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAITRL 885

Query: 184  RDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFSNEG 243
            RDLCLSTYGESSHGH L  KNSNSS  PT                        QSFSNEG
Sbjct: 886  RDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFSNEG 945

Query: 244  KNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKS 281
            KN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKKKKS
Sbjct: 946  KNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKKKKS 1005

[Close]

BLAST of CsaV3_4G003560 vs. NCBI nr
Match: TYK16972.1 (mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 4.4e-120
Identity = 239/301 (79.40%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 4    RPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLVKAN 63
            RPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLVKAN
Sbjct: 706  RPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLVKAN 765

Query: 64   DGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFP 123
            DGEGLAIGGF SRER+GIRAFYSAAISKRH TTILEA DGIIISISGFINRPRT ENGFP
Sbjct: 766  DGEGLAIGGFTSRERAGIRAFYSAAISKRHGTTILEAADGIIISISGFINRPRTLENGFP 825

Query: 124  PKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAVTRL 183
            PKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+TRL
Sbjct: 826  PKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAITRL 885

Query: 184  RDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFSNEG 243
            RDLCLSTYGESSHGH L  KNSNSS  PT                        QSFSNEG
Sbjct: 886  RDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFSNEG 945

Query: 244  KNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKS 281
            KN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKKKKS
Sbjct: 946  KNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKKKKS 1005

[Close]

BLAST of CsaV3_4G003560 vs. NCBI nr
Match: XP_008453960.1 (PREDICTED: uncharacterized protein LOC103494524 isoform X2 [Cucumis melo])

HSP 1 Score: 441.4 bits (1134), Expect = 5.8e-120
Identity = 241/304 (79.28%), Postives = 249/304 (81.91%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           M TRPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLV
Sbjct: 1   MGTRPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGF SRE +GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT EN
Sbjct: 61  KANDGEGLAIGGFTSRE-AGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLEN 120

Query: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180
           GFPPKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+
Sbjct: 121 GFPPKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAI 180

Query: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFS 240
           TRLRDLCLSTYGESSHGH L  KNSNSS  PT                        QSFS
Sbjct: 181 TRLRDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFS 240

Query: 241 NEGKNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKK 281
           NEGKN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKK
Sbjct: 241 NEGKNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKK 300

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy Swiss-Prot
Match: Q8RWD7 (Protein EMBRYO DEFECTIVE 1674 OS=Arabidopsis thaliana OX=3702 GN=EMB1674 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 6.8e-23
Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 15  TPSSVPFKTDRKPTATPTTPKT-PATCSTSIIP--SSLKSIFLYDWWLVKANDGEGLAIG 74
           T  S   KT  KP ++P T  T P     ++I    +LKS+ L DWWL K   G+ L I 
Sbjct: 26  TSPSTYSKTLPKPNSSPGTDGTFPTPFPLAVITPIKTLKSVTLSDWWLTK--KGKDLCIK 85

Query: 75  GFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFPPKVYNHFL 134
           GF S   SG+R F S  ISKRHE+T LEA DGI ISI+GFINR R  ENG   +V N F 
Sbjct: 86  GFESNGASGVRLFSSGTISKRHESTTLEAIDGITISINGFINRSRCLENGISIEVCNRFR 145

Query: 135 LGFPFNWKDY 142
           LGFP++W+DY
Sbjct: 146 LGFPYDWEDY 153

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy Swiss-Prot
Match: F4KCE9 (Kinetochore-associated protein KNL-2 homolog OS=Arabidopsis thaliana OX=3702 GN=KNL2 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.4e-12
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 50  KSIFLYDWWLVKAN---DGEGLAIGGF-ASRERSGIRAFYSAAISKRHETTILEATDGII 109
           K++ L DWWL+K     +G+   + GF  S E   +R F S+ I+K  +   L A+DGI 
Sbjct: 17  KTVVLRDWWLIKCPKEFEGKQFGVAGFEESVETRAMRVFTSSPITKALDVFTLLASDGIY 76

Query: 110 ISISGFINRPRTHENGFPPKVYNHFLLGFPFNWKDYMSS 145
           I++ GF+N+ R  +NGF P++   F+ GFP  W+   +S
Sbjct: 77  ITLRGFLNKERVLKNGFNPEISREFIFGFPPCWERVCNS 115

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL
Match: A0A0A0KZ21 (SANTA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G016400 PE=4 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 281/293 (95.90%), Postives = 281/293 (95.90%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV
Sbjct: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN
Sbjct: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120

Query: 121 GFPPK------------VYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTS 180
           GFPPK            VYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTS
Sbjct: 121 GFPPKKLRKVHDMQLEQVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTS 180

Query: 181 HYLEPDLDNLAVTRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDS 240
           HYLEPDLDNLAVTRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDS
Sbjct: 181 HYLEPDLDNLAVTRLRDLCLSTYGESSHGHDLFMKNSNSSCCPTQSFSNEGKNDDVIKDS 240

Query: 241 LHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK 282
           LHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK
Sbjct: 241 LHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKSRK 293

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL
Match: A0A1S3BWZ5 (uncharacterized protein LOC103494524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494524 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122
Identity = 242/304 (79.61%), Postives = 250/304 (82.24%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           M TRPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLV
Sbjct: 1   MGTRPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGF SRER+GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT EN
Sbjct: 61  KANDGEGLAIGGFTSRERAGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLEN 120

Query: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180
           GFPPKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+
Sbjct: 121 GFPPKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAI 180

Query: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFS 240
           TRLRDLCLSTYGESSHGH L  KNSNSS  PT                        QSFS
Sbjct: 181 TRLRDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFS 240

Query: 241 NEGKNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKK 281
           NEGKN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKK
Sbjct: 241 NEGKNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKK 300

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL
Match: A0A5A7TRY3 (Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003680 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.3e-121
Identity = 240/301 (79.73%), Postives = 248/301 (82.39%), Query Frame = 0


Query: 4    RPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLVKAN 63
            RPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLVKAN
Sbjct: 706  RPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLVKAN 765

Query: 64   DGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFP 123
            DGEGLAIGGF SRER+GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT ENGFP
Sbjct: 766  DGEGLAIGGFTSRERAGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLENGFP 825

Query: 124  PKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAVTRL 183
            PKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+TRL
Sbjct: 826  PKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAITRL 885

Query: 184  RDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFSNEG 243
            RDLCLSTYGESSHGH L  KNSNSS  PT                        QSFSNEG
Sbjct: 886  RDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFSNEG 945

Query: 244  KNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKS 281
            KN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKKKKS
Sbjct: 946  KNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKKKKS 1005

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL
Match: A0A5D3CZJ0 (Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001130 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 2.1e-120
Identity = 239/301 (79.40%), Postives = 247/301 (82.06%), Query Frame = 0


Query: 4    RPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLVKAN 63
            RPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLVKAN
Sbjct: 706  RPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLVKAN 765

Query: 64   DGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFP 123
            DGEGLAIGGF SRER+GIRAFYSAAISKRH TTILEA DGIIISISGFINRPRT ENGFP
Sbjct: 766  DGEGLAIGGFTSRERAGIRAFYSAAISKRHGTTILEAADGIIISISGFINRPRTLENGFP 825

Query: 124  PKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAVTRL 183
            PKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+TRL
Sbjct: 826  PKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAITRL 885

Query: 184  RDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFSNEG 243
            RDLCLSTYGESSHGH L  KNSNSS  PT                        QSFSNEG
Sbjct: 886  RDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFSNEG 945

Query: 244  KNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKKKKS 281
            KN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKKKKS
Sbjct: 946  KNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKKKKS 1005

[Close]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL
Match: A0A1S3BXH8 (uncharacterized protein LOC103494524 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494524 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.8e-120
Identity = 241/304 (79.28%), Postives = 249/304 (81.91%), Query Frame = 0


Query: 1   MATRPRGIRSSASATPSSVPFKTDRKPTATPTTPKTPATCSTSIIPSSLKSIFLYDWWLV 60
           M TRPR  RSSASATP SV FKTDRK  AT TTP TPATCSTSI+PSSLKS+FL+DWWLV
Sbjct: 1   MGTRPR-TRSSASATPPSVSFKTDRKLKATTTTPNTPATCSTSIVPSSLKSVFLFDWWLV 60

Query: 61  KANDGEGLAIGGFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHEN 120
           KANDGEGLAIGGF SRE +GIRAFYSAAISKRHETTILEA DGIIISISGFINRPRT EN
Sbjct: 61  KANDGEGLAIGGFTSRE-AGIRAFYSAAISKRHETTILEAADGIIISISGFINRPRTLEN 120

Query: 121 GFPPKVYNHFLLGFPFNWKDYMSSGSIRKSTVEFFKASTSRSNDQGTSHYLEPDLDNLAV 180
           GFPPKVYNHFLLGFPFNWKDYM S S RKS  E FKASTS SNDQGTSHYLEPDLDNLA+
Sbjct: 121 GFPPKVYNHFLLGFPFNWKDYMRSSSDRKSPFECFKASTSHSNDQGTSHYLEPDLDNLAI 180

Query: 181 TRLRDLCLSTYGESSHGHDLFMKNSNSSCCPT------------------------QSFS 240
           TRLRDLCLSTYGESSHGH L  KNSNSS  PT                        QSFS
Sbjct: 181 TRLRDLCLSTYGESSHGHGLSTKNSNSSGSPTKTFKSGLKTPKGPQQVNSHQDLKEQSFS 240

Query: 241 NEGKNDDVIKDSLHARQEAKKLDIDLQIRRGQGVCTRSMTKLKNTRNRSKESLISDSRKK 281
           NEGKN+DVIKDS+HA QEA KLD+D QIR  QGVCTRSMTKLKNTRNRSKESLI DSRKK
Sbjct: 241 NEGKNNDVIKDSMHASQEANKLDMDFQIRGRQGVCTRSMTKLKNTRNRSKESLILDSRKK 300

[Close]

BLAST of CsaV3_4G003560 vs. TAIR 10
Match: AT1G58210.1 (kinase interacting family protein )

HSP 1 Score: 109.4 bits (272), Expect = 4.8e-24
Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 0


Query: 15  TPSSVPFKTDRKPTATPTTPKT-PATCSTSIIP--SSLKSIFLYDWWLVKANDGEGLAIG 74
           T  S   KT  KP ++P T  T P     ++I    +LKS+ L DWWL K   G+ L I 
Sbjct: 26  TSPSTYSKTLPKPNSSPGTDGTFPTPFPLAVITPIKTLKSVTLSDWWLTK--KGKDLCIK 85

Query: 75  GFASRERSGIRAFYSAAISKRHETTILEATDGIIISISGFINRPRTHENGFPPKVYNHFL 134
           GF S   SG+R F S  ISKRHE+T LEA DGI ISI+GFINR R  ENG   +V N F 
Sbjct: 86  GFESNGASGVRLFSSGTISKRHESTTLEAIDGITISINGFINRSRCLENGISIEVCNRFR 145

Query: 135 LGFPFNWKDY 142
           LGFP++W+DY
Sbjct: 146 LGFPYDWEDY 153

[Close]

BLAST of CsaV3_4G003560 vs. TAIR 10
Match: AT5G02520.1 (CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidopsis thaliana protein match is: kinase interacting family protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in 154 species: Archae - 2; Bacteria - 99; Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes - 363 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 3.8e-13
Identity = 37/99 (37.37%), Postives = 58/99 (58.59%), Query Frame = 0


Query: 50  KSIFLYDWWLVKAN---DGEGLAIGGF-ASRERSGIRAFYSAAISKRHETTILEATDGII 109
           K++ L DWWL+K     +G+   + GF  S E   +R F S+ I+K  +   L A+DGI 
Sbjct: 17  KTVVLRDWWLIKCPKEFEGKQFGVAGFEESVETRAMRVFTSSPITKALDVFTLLASDGIY 76

Query: 110 ISISGFINRPRTHENGFPPKVYNHFLLGFPFNWKDYMSS 145
           I++ GF+N+ R  +NGF P++   F+ GFP  W+   +S
Sbjct: 77  ITLRGFLNKERVLKNGFNPEISREFIFGFPPCWERVCNS 115

The following BLAST results are available for this feature:

BLAST of CsaV3_4G003560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152288.1	5.2e-153	100.00	uncharacterized protein LOC101215879 [Cucumis sativus] >KAE8649115.1 hypothetica...	[more]
XP_008453958.1	6.1e-122	79.61	PREDICTED: uncharacterized protein LOC103494524 isoform X1 [Cucumis melo]	[more]
KAA0044617.1	6.8e-121	79.73	mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
TYK16972.1	4.4e-120	79.40	mis18-binding protein 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008453960.1	5.8e-120	79.28	PREDICTED: uncharacterized protein LOC103494524 isoform X2 [Cucumis melo]	[more]

BLAST of CsaV3_4G003560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD7	6.8e-23	50.77	Protein EMBRYO DEFECTIVE 1674 OS=Arabidopsis thaliana OX=3702 GN=EMB1674 PE=2 SV...	[more]
F4KCE9	5.4e-12	37.37	Kinetochore-associated protein KNL-2 homolog OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CsaV3_4G003560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ21	1.2e-150	95.90	SANTA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G016400 PE=4 ...	[more]
A0A1S3BWZ5	3.0e-122	79.61	uncharacterized protein LOC103494524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TRY3	3.3e-121	79.73	Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CZJ0	2.1e-120	79.40	Mis18-binding protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BXH8	2.8e-120	79.28	uncharacterized protein LOC103494524 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CsaV3_4G003560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58210.1	4.8e-24	50.77	kinase interacting family protein	[more]
AT5G02520.1	3.8e-13	37.37	CONTAINS InterPro DOMAIN/s: SANT associated (InterPro:IPR015216); BEST Arabidops...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015216	SANT associated	PFAM	PF09133	SANTA	coord: 52..141 e-value: 2.9E-23 score: 82.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..274
None	No IPR available	PANTHER	PTHR35311	KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG	coord: 1..280
None	No IPR available	PANTHER	PTHR35311:SF8	INTERACTING FAMILY PROTEIN, PUTATIVE-RELATED	coord: 1..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G003560.1	CsaV3_4G003560.1	mRNA