CsaV3_4G003320 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G003320
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionHTH myb-type domain-containing protein
Locationchr4: 2033947 .. 2035089 (+)
RNA-Seq ExpressionCsaV3_4G003320
SyntenyCsaV3_4G003320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTCCATCTAATTTTGATCAAAATTCAGTTACATTGGGTCCGAATATAGATGATAATTATAAGATGCCATTGGAGTTTTCTTCATGTAATTGGATAGATAATGCAAGGTTGGAGCAACTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCCACAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAGTACGTATATAACAATACAAATATAATATATGCAACTCATCTAAGTTATTTACTAATACATACATATTATTGCAGATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGGTTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAGCATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAATGATCAATAA

mRNA sequence

ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTCCATCTAATTTTGATCAAAATTCAGTTACATTGGGTCCGAATATAGATGATAATTATAAGATGCCATTGGAGTTTTCTTCATGTAATTGGATAGATAATGCAAGGTTGGAGCAACTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCCACAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGGTTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAGCATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAATGATCAATAA

Coding sequence (CDS)

ATGGCAGAAAATAAGAATGTGTCTTTTCCTCATTCTTCTGGTTTTTCTCTTCATACTCCAACCAGTCCATCTAATTTTGATCAAAATTCAGTTACATTGGGTCCGAATATAGATGATAATTATAAGATGCCATTGGAGTTTTCTTCATGTAATTGGATAGATAATGCAAGGTTGGAGCAACTACCAGCGATGGAAGAGACTAGTTTGAGAAGGGTGAATCATGGTTTATCATTAACAAATCCCAACGGTAACTTTGAAACTACACAATATTACCCTTCTTTCCCTCAATTTAATGGTCTCAATGATAACTTTGAAACTCCACAATTTTACCATCCTTCTTATACTCAATTTAATGATCCCAACAATAACTACAACAACATGGGTGATGCTTTTCTTTGTTCTCCTTCTACTCTTTCAACAATGCATAACTCATCTAATGATTCTATTAGATATAATAATGGTTTTCTCTCTGATGTCGTCAATTCCAACTCCACTAAAACAACCATGACATTTGAAAACGGTTGTTCTTTTGACTCCAATTTGAATAATCCTTCTCTCTTTCATGATCCTCAAACATCACATTTTTGCTCTCCTTCCACTTTTTCAATGACTCATAATAATGGTCAATTTGCTGACTCCACTAGTTATACTGGTTTGCTTTCCGACATCCCTACCCAAATGATCAGACCACATGTTCCAACAATATCTTTGTCAACGACAAATTTGTTGCCATCGTCATCATTACCGCCACAACCGCTATTGTCACAAAACTCATTGAAGATAAGAAACAACTCCACAAATTGGAGCATAAGGGAGCACAAATTATTTCTAGCAGGGATGCAACTTTTAGGCCAAGGTGCATGGAAAAAAATTGCAAACTACGTGGTGGTTACAAAAACACACACACAAGTGGCTAGTCATGCACAGAAGTACTTTCTTCGCCAGACCTCACAAAAGCATAAGAGGACAAGTATTCATGATATCACCACTGCCGAGCCTGAATTTTTTGCTCTAGCGGAATCACGTATAGCGCAACACATGAAGCATCTCAACAAAAATGATCAATAA

Protein sequence

MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDPNNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ*
Homology
BLAST of CsaV3_4G003320 vs. NCBI nr
Match: KGN53075.1 (hypothetical protein Csa_014760 [Cucumis sativus])

HSP 1 Score: 717.2 bits (1850), Expect = 6.9e-203
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0

Query: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60
           MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ
Sbjct: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60

Query: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120
           LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP
Sbjct: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120

Query: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180
           NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN
Sbjct: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180

Query: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240
           LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT
Sbjct: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240

Query: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300
           NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT
Sbjct: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300

Query: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ
Sbjct: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 355

BLAST of CsaV3_4G003320 vs. NCBI nr
Match: XP_011654326.2 (myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_015417 [Cucumis sativus])

HSP 1 Score: 663.7 bits (1711), Expect = 9.0e-187
Identity = 332/357 (93.00%), Postives = 339/357 (94.96%), Query Frame = 0

Query: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMP--LEFSSCNWIDNARL 60
           MAENKNVSFPHSSG SLHTPTSP NFDQNSV L P+IDDN++M   LEFSSCNWI+N   
Sbjct: 1   MAENKNVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGLEFSSCNWINNVGS 60

Query: 61  EQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN 120
           EQLP MEETSLRRVNH LSLTNPNGNFETTQYYPSFPQFN LNDNFETPQFYHP+YTQFN
Sbjct: 61  EQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYPSFPQFNVLNDNFETPQFYHPAYTQFN 120

Query: 121 DPNNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180
           DPNNNYNNMGDAFLCSPSTLST HNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD
Sbjct: 121 DPNNNYNNMGDAFLCSPSTLSTTHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180

Query: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240
           SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS
Sbjct: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240

Query: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVT 300
           TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVV+T
Sbjct: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300

Query: 301 KTHTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           KTHTQVASHAQKYFLRQTS KHKRTSIHDITTAEPEFFALAE+RIAQHMK LN  DQ
Sbjct: 301 KTHTQVASHAQKYFLRQTSPKHKRTSIHDITTAEPEFFALAEARIAQHMKRLNNKDQ 357

BLAST of CsaV3_4G003320 vs. NCBI nr
Match: KAA0044592.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 1.8e-78
Identity = 205/371 (55.26%), Postives = 243/371 (65.50%), Query Frame = 0

Query: 1   MAENK-NVSFPHSSGFSLHTPTSPSNFDQNSV-TLGPNIDDNYKMPLEFSSC---NWIDN 60
           M ENK N+ F HSS     TPTS  NFDQNS  TL   I+D+      FSS    +W +N
Sbjct: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60

Query: 61  ARLEQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSY 120
                    EE      NH     N   N ETTQ YP S   F   NDNFETP++YHPS 
Sbjct: 61  ---------EE------NH-----NHKRNLETTQCYPSSSTPFIDANDNFETPRYYHPSS 120

Query: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LST HN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180

Query: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240

Query: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300

Query: 301 QGAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAES 353
           +  WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+
Sbjct: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 338

BLAST of CsaV3_4G003320 vs. NCBI nr
Match: XP_008454484.1 (PREDICTED: myb-like protein J [Cucumis melo])

HSP 1 Score: 285.4 bits (729), Expect = 6.7e-73
Identity = 172/287 (59.93%), Postives = 206/287 (71.78%), Query Frame = 0

Query: 80  NPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSYTQFNDPNNNYNNMGDAFL------ 139
           N   N +TTQ YP S   F   NDNFETP++YHPS +Q  DPN+NY+NM DAFL      
Sbjct: 22  NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 81

Query: 140 CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSNLNNPSLFHDP 199
           CSPS LST HN  S NDSI + NGFLSDVVNS+STKT+    +  +F+   N  S + +P
Sbjct: 82  CSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTKTSSKSLDSMTFN---NRHSPYPNP 141

Query: 200 QTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTNLLPSSSLPP 259
           QTSHF SPS+ S THNN QFADST YTGLLSDI    +RP VPT+S STTNL   SSLPP
Sbjct: 142 QTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--VKMRPRVPTMSSSTTNL---SSLPP 201

Query: 260 QPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHA 319
           +P  S NSL I+NN+    WS++EH+LFLAGMQLLG+  WKKIA++VV+TKTH QVASHA
Sbjct: 202 RPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHA 261

Query: 320 QKYFL---RQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNK 353
           QKYFL   + +  K KR+SIHDITT EPEF A  E+ + QH+K LN+
Sbjct: 262 QKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 299

BLAST of CsaV3_4G003320 vs. NCBI nr
Match: TYK16992.1 (myb-like protein J [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-32
Identity = 81/130 (62.31%), Postives = 99/130 (76.15%), Query Frame = 0

Query: 228 IRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLGQ 287
           +RP VPT+S STTNL   SSLPP+P  S NSL I+NN     WS++EH+LFLAGMQLLG+
Sbjct: 1   MRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNKIRNYWSLKEHRLFLAGMQLLGK 60

Query: 288 GAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAESR 347
             WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+ 
Sbjct: 61  AEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEAC 120

Query: 348 IAQHMKHLNK 353
           + QH+K LN+
Sbjct: 121 LPQHLKGLNQ 127

BLAST of CsaV3_4G003320 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-13
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 0

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EHKLFL G++  G+G W+ I+   V+T+T TQVASHAQKYF+RQ S  + 
Sbjct: 128 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 187

Query: 322 HKRTSIHDITT 331
            +R SIHDITT
Sbjct: 188 KRRASIHDITT 198

BLAST of CsaV3_4G003320 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12
Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 0

Query: 257 NSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQT 316
           NS + R     W+  EHKLFL G+Q +G+G W+ I+   V T+T TQVASHAQKYFLR++
Sbjct: 86  NSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRS 145

Query: 317 --SQKHKRTSIHDITT 331
             +++ +R+S+ DITT
Sbjct: 146 NLNRRRRRSSLFDITT 161

BLAST of CsaV3_4G003320 vs. ExPASy Swiss-Prot
Match: Q9LVS0 (Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.8e-12
Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 0

Query: 257 NSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQT 316
           +S + R   T W+  EH++FL G+Q LG+G W+ I+   V T+T TQVASHAQKYF+RQ+
Sbjct: 87  SSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQS 146

Query: 317 --SQKHKRTSIHDITTAE 333
             S++ +R+S+ D+   E
Sbjct: 147 NVSRRKRRSSLFDMVPDE 164

BLAST of CsaV3_4G003320 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.5e-11
Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EH+LFL G+   G+G W+ I+   VVT+T TQVASHAQKYF+R  S  + 
Sbjct: 114 RRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKD 173

Query: 322 HKRTSIHDITT 331
            +R+SIHDIT+
Sbjct: 174 RRRSSIHDITS 184

BLAST of CsaV3_4G003320 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.6e-11
Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 0

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EH+LFL G+   G+G W+ I+   V+++T TQVASHAQKYF+R  S  + 
Sbjct: 138 RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 197

Query: 322 HKRTSIHDITT 331
            +R+SIHDIT+
Sbjct: 198 RRRSSIHDITS 208

BLAST of CsaV3_4G003320 vs. ExPASy TrEMBL
Match: A0A0A0KTY5 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G015160 PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 3.3e-203
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0

Query: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60
           MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ
Sbjct: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMPLEFSSCNWIDNARLEQ 60

Query: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120
           LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP
Sbjct: 61  LPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFNDP 120

Query: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180
           NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN
Sbjct: 121 NNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSN 180

Query: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240
           LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT
Sbjct: 181 LNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTT 240

Query: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300
           NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT
Sbjct: 241 NLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKT 300

Query: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ
Sbjct: 301 HTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 355

BLAST of CsaV3_4G003320 vs. ExPASy TrEMBL
Match: A0A0A0KYZ4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G014580 PE=4 SV=1)

HSP 1 Score: 668.3 bits (1723), Expect = 1.8e-188
Identity = 334/357 (93.56%), Postives = 340/357 (95.24%), Query Frame = 0

Query: 1   MAENKNVSFPHSSGFSLHTPTSPSNFDQNSVTLGPNIDDNYKMP--LEFSSCNWIDNARL 60
           MAENKNVSFPHSSG SLHTPTSP NFDQNSV L P+IDDN++M   LEFSSCNWI+N   
Sbjct: 1   MAENKNVSFPHSSGSSLHTPTSPYNFDQNSVALSPSIDDNHEMSLGLEFSSCNWINNVGS 60

Query: 61  EQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN 120
           EQLP MEETSLRRVNH LSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN
Sbjct: 61  EQLPTMEETSLRRVNHSLSLTNPNGNFETTQYYPSFPQFNGLNDNFETPQFYHPSYTQFN 120

Query: 121 DPNNNYNNMGDAFLCSPSTLSTMHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180
           DPNNNYNNMGDAFLCSPSTLST HNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD
Sbjct: 121 DPNNNYNNMGDAFLCSPSTLSTTHNSSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFD 180

Query: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240
           SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS
Sbjct: 181 SNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLS 240

Query: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVT 300
           TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVV+T
Sbjct: 241 TTNLLPSSSLPPQPLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVIT 300

Query: 301 KTHTQVASHAQKYFLRQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           KTHTQVASHAQKYFLRQTS KHKRTSIHDITTAEPEFFALAE+RIAQHMK LN  DQ
Sbjct: 301 KTHTQVASHAQKYFLRQTSPKHKRTSIHDITTAEPEFFALAEARIAQHMKRLNNKDQ 357

BLAST of CsaV3_4G003320 vs. ExPASy TrEMBL
Match: A0A5A7TMR3 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003420 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 8.8e-79
Identity = 205/371 (55.26%), Postives = 243/371 (65.50%), Query Frame = 0

Query: 1   MAENK-NVSFPHSSGFSLHTPTSPSNFDQNSV-TLGPNIDDNYKMPLEFSSC---NWIDN 60
           M ENK N+ F HSS     TPTS  NFDQNS  TL   I+D+      FSS    +W +N
Sbjct: 1   MQENKNNLLFLHSSS----TPTSLHNFDQNSAPTLTSTINDHEMSRQLFSSIESGDWTNN 60

Query: 61  ARLEQLPAMEETSLRRVNHGLSLTNPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSY 120
                    EE      NH     N   N ETTQ YP S   F   NDNFETP++YHPS 
Sbjct: 61  ---------EE------NH-----NHKRNLETTQCYPSSSTPFIDANDNFETPRYYHPSS 120

Query: 121 TQFNDPNNNYNNMGDAFL------CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTK 180
           +Q  DPN+NY+NM DAFL      CSPS LST HN  S NDSI + NGFLSDVVNS+STK
Sbjct: 121 SQSVDPNSNYSNMDDAFLFSDSLTCSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTK 180

Query: 181 TTMTFENGCSFDSNLNNPSLFHDPQTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQ 240
           T+    +  +F+   N  S + +PQTSHF SPS+ S THNN QFADST YTGLLSDI   
Sbjct: 181 TSSKSLDSMTFN---NRHSPYPNPQTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--V 240

Query: 241 MIRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLG 300
            +RP VPT+S STTNL   SSLPP+P  S NSL I+NN+    WS++EH+LFLAGMQLLG
Sbjct: 241 KMRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLG 300

Query: 301 QGAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAES 353
           +  WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+
Sbjct: 301 KAEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEA 338

BLAST of CsaV3_4G003320 vs. ExPASy TrEMBL
Match: A0A1S3BZH7 (myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.2e-73
Identity = 172/287 (59.93%), Postives = 206/287 (71.78%), Query Frame = 0

Query: 80  NPNGNFETTQYYP-SFPQFNGLNDNFETPQFYHPSYTQFNDPNNNYNNMGDAFL------ 139
           N   N +TTQ YP S   F   NDNFETP++YHPS +Q  DPN+NY+NM DAFL      
Sbjct: 22  NHKRNLKTTQCYPSSSTPFIDANDNFETPRYYHPSSSQSVDPNSNYSNMDDAFLFSDSLT 81

Query: 140 CSPSTLSTMHN--SSNDSIRYNNGFLSDVVNSNSTKTTMTFENGCSFDSNLNNPSLFHDP 199
           CSPS LST HN  S NDSI + NGFLSDVVNS+STKT+    +  +F+   N  S + +P
Sbjct: 82  CSPSILSTTHNKDSFNDSIGH-NGFLSDVVNSSSTKTSSKSLDSMTFN---NRHSPYPNP 141

Query: 200 QTSHFCSPSTFSMTHNNGQFADSTSYTGLLSDIPTQMIRPHVPTISLSTTNLLPSSSLPP 259
           QTSHF SPS+ S THNN QFADST YTGLLSDI    +RP VPT+S STTNL   SSLPP
Sbjct: 142 QTSHFYSPSSISTTHNNDQFADSTEYTGLLSDI--VKMRPRVPTMSSSTTNL---SSLPP 201

Query: 260 QPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHA 319
           +P  S NSL I+NN+    WS++EH+LFLAGMQLLG+  WKKIA++VV+TKTH QVASHA
Sbjct: 202 RPPSSHNSLNIKNNNIRNYWSLKEHRLFLAGMQLLGKAEWKKIADHVVITKTHKQVASHA 261

Query: 320 QKYFL---RQTSQKHKRTSIHDITTAEPEFFALAESRIAQHMKHLNK 353
           QKYFL   + +  K KR+SIHDITT EPEF A  E+ + QH+K LN+
Sbjct: 262 QKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEACLPQHLKGLNQ 299

BLAST of CsaV3_4G003320 vs. ExPASy TrEMBL
Match: A0A5D3CZL0 (Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001340 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-33
Identity = 81/130 (62.31%), Postives = 99/130 (76.15%), Query Frame = 0

Query: 228 IRPHVPTISLSTTNLLPSSSLPPQPLLSQNSLKIRNNSTN--WSIREHKLFLAGMQLLGQ 287
           +RP VPT+S STTNL   SSLPP+P  S NSL I+NN     WS++EH+LFLAGMQLLG+
Sbjct: 1   MRPRVPTMSSSTTNL---SSLPPRPPSSHNSLNIKNNKIRNYWSLKEHRLFLAGMQLLGK 60

Query: 288 GAWKKIANYVVVTKTHTQVASHAQKYFL---RQTSQKHKRTSIHDITTAEPEFFALAESR 347
             WKKIA++VV+TKTH QVASHAQKYFL   + +  K KR+SIHDITT EPEF A  E+ 
Sbjct: 61  AEWKKIADHVVITKTHKQVASHAQKYFLHLDKLSKHKRKRSSIHDITTVEPEFLAEVEAC 120

Query: 348 IAQHMKHLNK 353
           + QH+K LN+
Sbjct: 121 LPQHLKGLNQ 127

BLAST of CsaV3_4G003320 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-17
Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTSQK-- 321
           R   T W+  EHKLFL G++  G+G W+ I+  VVVT+T TQVASHAQKYFLRQ S K  
Sbjct: 95  RKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKE 154

Query: 322 HKRTSIHDITTAE 333
            KR+SIHDITT +
Sbjct: 155 RKRSSIHDITTVD 167

BLAST of CsaV3_4G003320 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 79.0 bits (193), Expect = 8.8e-15
Identity = 41/82 (50.00%), Postives = 53/82 (64.63%), Query Frame = 0

Query: 262 RNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTS--QK 321
           R     W+  EHKLFL G++  G+G W+ I+   V+T+T TQVASHAQKYF+RQ S  + 
Sbjct: 137 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 196

Query: 322 HKRTSIHDITTAEPEFFALAES 342
            +R SIHDITT   E  A  E+
Sbjct: 197 KRRASIHDITTVNLEEEASLET 218

BLAST of CsaV3_4G003320 vs. TAIR 10
Match: AT3G10580.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-14
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 268 WSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTSQKHKRTSIHD 327
           WS  EH+LFL G+   G+G WK I+   V +++  QVASHAQKYFLRQ ++K KR SIHD
Sbjct: 97  WSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKNKKGKRFSIHD 156

Query: 328 ITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           +T  + E   +  S +    +  + +DQ
Sbjct: 157 MTLGDAENVTVPVSNLNSMGQQPHFDDQ 184

BLAST of CsaV3_4G003320 vs. TAIR 10
Match: AT3G10580.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 3.4e-14
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 0

Query: 268 WSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKYFLRQTSQKHKRTSIHD 327
           WS  EH+LFL G+   G+G WK I+   V +++  QVASHAQKYFLRQ ++K KR SIHD
Sbjct: 97  WSPEEHRLFLDGLNKYGKGDWKSISRECVTSRSPMQVASHAQKYFLRQKNKKGKRFSIHD 156

Query: 328 ITTAEPEFFALAESRIAQHMKHLNKNDQ 356
           +T  + E   +  S +    +  + +DQ
Sbjct: 157 MTLGDAENVTVPVSNLNSMGQQPHFDDQ 184

BLAST of CsaV3_4G003320 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 4.4e-14
Identity = 39/81 (48.15%), Postives = 55/81 (67.90%), Query Frame = 0

Query: 252 PLLSQNSLKIRNNSTNWSIREHKLFLAGMQLLGQGAWKKIANYVVVTKTHTQVASHAQKY 311
           P+ S N    R     W+  EHKLFL G+Q +G+G WK I+   V T+T TQVASHAQKY
Sbjct: 82  PMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTSTQVASHAQKY 141

Query: 312 FLRQT--SQKHKRTSIHDITT 331
           FLR++  +++ +R+S+ D+TT
Sbjct: 142 FLRRSNLNRRRRRSSLFDMTT 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN53075.16.9e-203100.00hypothetical protein Csa_014760 [Cucumis sativus][more]
XP_011654326.29.0e-18793.00myb-like protein J [Cucumis sativus] >KAE8649106.1 hypothetical protein Csa_0154... [more]
KAA0044592.11.8e-7855.26myb-like protein J [Cucumis melo var. makuwa][more]
XP_008454484.16.7e-7359.93PREDICTED: myb-like protein J [Cucumis melo][more]
TYK16992.11.1e-3262.31myb-like protein J [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q8S9H73.6e-1353.52Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 ... [more]
Q2V9B01.8e-1250.00Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
Q9LVS06.8e-1246.15Transcription factor KUA1 OS=Arabidopsis thaliana OX=3702 GN=KUA1 PE=1 SV=1[more]
Q9FNN61.5e-1150.70Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1[more]
B8A9B22.6e-1147.89Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 ... [more]
Match NameE-valueIdentityDescription
A0A0A0KTY53.3e-203100.00HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01516... [more]
A0A0A0KYZ41.8e-18893.56HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G01458... [more]
A0A5A7TMR38.8e-7955.26Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00... [more]
A0A1S3BZH73.2e-7359.93myb-like protein J OS=Cucumis melo OX=3656 GN=LOC103494880 PE=4 SV=1[more]
A0A5D3CZL05.6e-3362.31Myb-like protein J OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G0... [more]
Match NameE-valueIdentityDescription
AT5G04760.15.5e-1760.27Duplicated homeodomain-like superfamily protein [more]
AT5G58900.18.8e-1550.00Homeodomain-like transcriptional regulator [more]
AT3G10580.13.4e-1444.32Homeodomain-like superfamily protein [more]
AT3G10580.23.4e-1444.32Homeodomain-like superfamily protein [more]
AT1G74840.14.4e-1448.15Homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 264..314
e-value: 5.5E-5
score: 32.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 260..312
score: 6.121142
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 267..312
e-value: 1.60951E-4
score: 36.7846
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 267..311
e-value: 2.2E-8
score: 34.2
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 267..316
score: 12.310595
NoneNo IPR availableGENE3D1.10.10.60coord: 266..317
e-value: 7.1E-13
score: 50.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availablePANTHERPTHR44042:SF41DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 4..355
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 265..315
e-value: 1.3E-14
score: 52.2
IPR043363Transcription factor DIVARICATA-likePANTHERPTHR44042DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 4..355
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 261..316

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G003320.1CsaV3_4G003320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding