CsaV3_4G002780 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G002780
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 1715332 .. 1719032 (+)
RNA-Seq ExpressionCsaV3_4G002780
SyntenyCsaV3_4G002780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCGTGAGTTAATAGGTCAAATGTATAAAGTTAATAGGTCAAGTGTATAGTTATGTTGTTGGAAAGTTCACTTAACCAAGATTGATTTAAGAGATTAAAATTGAAAGGTGTAGTTGCAGTCTGAAGGAGAGAGGGTGTGATGTGTGAACAATTTGCTGAAAAAATAAATCATTCCCGTATTGAAAATCGTCAGAGGCTAAAGAAGAAAGAGAAAGGCTGGACCAAATAGCCGCATAAAGAACGCCAAACTCCAAAGATTGGGAACAACACGCCAGATGCTAATAAGCCATTACGCGATTGCAAACCCATCGTTATCCATTGAAGATAAGATCCCAACTCCCAATTCGTCTACATTACGTGTAATCCACCAAATCTTCACTTTCATTTCCTACCCTCCTCCTCCGCCTTCTCCATATTTATCTCAATCCCAATTCCCCCTTTTGCTCTTTTTCTGTTTTCTCTCTATCCAAACAGAAATTTGAGTTAAAAGTGAGCAGGAACTATCTGGGTTACAACCAAAAAGGGGTTTTTTAGTTCAATCTTCCATTTGGGTTTTCACCGTTTGGTGTTTTTGTGCTGTGGGTTGAATGATTTCATCAAGAAACAAACAAAGTTTTGGTTATCACATCTATCCACTTGCTGTGTTTGTTGTTGACGGGTTTTAGACTGGCTTTCCAATCCAATCATAGTCCCCCCCTTTTATTTATTTATCCATTGCCCTCGACTCTTTCAACAAAAGCGTTGTTGGGTTTTCTTTTTCTTTGAGAGGATTTTGTGTTTTTCATAGAAGAATTATGATGCAACGACACCAGCGAGACGGGGGGGAGTCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATTCTCCGATCTCCTCCGCCGTCGATTCCGTTTCCCGATCATTCGCCGGTGGTTTCAACCGCCTCATCGTCGCGACGGACGATTCCAGCGCAGATAACTCCGGCGGGGTTTGCGTCGCTACTTTTAGGAATTTCTCTGGCTCTGATGCTCTGTGGATCAGTTACCTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGATTATGTTTTTCTATGTCGCCGCGGTGGTTTCCTGTCTCTCCATGATCGGACGCTCGATTATCTGCTACGCCACGGCTCCGCCTAGAAAGGATATTCCAGGTACGATGGCCTGTTTTGATGATTTTCATTTGAACCTCAATTTCGCTTTCATACAATTTTGTTTTGTTTGAATGTCTTGTCATCAATTCTGAATCTTAGAAGTAAATTTCTCTTCAATTGTTATGTTAAATTCTATGTTTCTGTTAGAATTTTGTCTTTTCTTGAACCCCAATGATGGAGATGCCTTTATGTCCTAGATTCTGAAGATCAACCAGGTTTTTCATATGATTGAAGAACTAATCGTTTGGGGAAAGAAAATTGTCTTACAAAACAGATAAAGCAAGGGTTCCTAACAGTCTATATTTCAAACTGTACAATCTCAGAATAGAAACCGACGAAGAATTACAAATACAAATACATATACGTGTCGTAGAAGTGTTGGAGTGCTCAAGTATTTGGTAGGGACTAAAGTGTGTGCTTTTTAAGTAACCGATTTTGATTTCTTTTGATAGCTAGGTTATGGACCTTATGGTTGATTTTTCCAAAATTGTGTCACTTTCACGATGGCCTTGTAGTGCAGGGCACCATGATATGGACTAAATATCTTACACTTTTTTCTTTTGATGATCTTTCTCTTTTCTTTTTTGACACCTATAAGAGTTGCGGTCAGCGTCTAGGTGTCAAGGATATTCTTAGTATATTAAATCCTAGGTAGGTCTTCATGGATGGAATTCATTTCATTTTTCGAATTCATTTCCTTTTTCTTCTAACCTTTATCAAATTTAGTTTTTTATTTATAGACGGGTTGCTGGAGGAAGCATTGATGATTTTCTTCCTATAATCTTAATATTACGATCCCATTATCAGGACCATGACCCACCATTGGGCTAACTTTGAGAAAGAAATAGGCTTTAAACGAAGACTTGAACCTAAAACTTTGGAGGCTTTTTCCAAACTTCCCCATCATGTACTATTAGACCCACCAAACTTGTCAAGCCATTGGCTGAGCATTTGAAAATCCGAAAACGAAAAGGTCGTTGTGAGAAATGAGAATGCTAAACTCTCTATTTGCTTTGTTGGGGTTGATTTTCCTTTTCATTAACCCTCCACAACTTGCACAGGGGGACCCATTAATATGCTAGAGCTATGTATGCTTTACAACTTCAAATGAAGGTTGGATCATTATGAAGAATGGTTCGTAAGGGATCCAAAGATGGTAGTATCAAAATCCGTGAACGTATAGATATTAGAATCTACAGGGAATGTCAACATCAATACTAAAAGAAAAAATGAAGATAGCTCCTTCTTTGGTGTGTAATTCAGAATTGTGGGATATGTATTTTGTTCCTACTCCAAAATGGAGACCGATTTTTCATCTTTGTTTGTGACCTCGTGAGCTGTTTGTAGCTTTTCATAGTTTCATTCAAATGTCTTGCAAATGAAAATTGAAAAAATCAGAAGTTTTAAACATAAATGACTTCAACCAAGGAGTCGTACTTTTAAAAAATTTCATGTGCAATCTTGGGTGTTGAACACGAACAGATGTGGCTATTTTCTGCAAAAGCCGTTAGTTAGAAAGTGTTGCCTGAACTAAAAGCTTCAAGTTTAATCAATGCTTTATTTCTGAACGTATTTGTTAATTAGTTTTGCATTTGTAGAGTCATGTAGGACTAGCCTTGACTAACTTTTTCCTATCCATACGATGTTGTTTAATCAGCAACCAGTTCATCCATCGTTCCCATTTCTTGTTTGCTACAAATTTAGAATTTCTTAACTCAAATTTCCCATCAACTTTGTGGCTGCAGCTTGGAAACTAATGTGAAGAGGTAGATGATGATGGAAAATGGAAACAAGCAAATGTTGTTTACGTGGCAGTGGGCTGCTCTATTTCCTTGGTTCTGCCTCCCTGGGTGGCTTTCTTCTCGACTCGACGAGGAAGAAGTGTTTGTTAATATTATATTTTCATACCATACTGGATCCTGTTGATATTGTTTCTGTTAAATAGAAGGGAGCAAAATGTTGGAAGGTTTAAGAATATGATAAAGAAATGCAAGAAGTGGGGGACTTAGTTCCATTTCATTTCCTCCTCTTACCCTTAGGCCATCATCCATACCTTTGAGGTAAATCTGTATTGATTAGAGAAGTAAATTAGCTGGTTAGGTTCTCAAATATGAATTCAAGAAGTATGTTCCCCTCCCCCGTATTGCCTTTTCCTTTTCAAGATTTTCTTCAAAAACATTACTAAAGGTTCTAGAACGGCGTTTGATGAAAAAACTTTAAGAGAACATGTGGAGATGTTACGTTTCTCTTTTCTAATAGAAATAGAGTTGTCAAAAAGTCTTACCCTATCTATTATTTGAAGACGAGAGAGTTACTTATTACGGATAATCTCGTAGTTGTTTTCCTAACTATAGTTTGGGTTTGCCTATTTTGTATAATATAGCAGTGAAATAGGCAATTAGTCTAAGAATTAATTCTACTTCAGCTTTCATCTTTTTTTTTTTATTGGTTAGAGTATAATTAGGTGGGGCGAGTTTTCGTTTAATTTTTTTTTGTCCTCTCTTTTGAGGTCAAATATATTACTTGAC

mRNA sequence

ATGATGCAACGACACCAGCGAGACGGGGGGGAGTCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATTCTCCGATCTCCTCCGCCGTCGATTCCGTTTCCCGATCATTCGCCGGTGGTTTCAACCGCCTCATCGTCGCGACGGACGATTCCAGCGCAGATAACTCCGGCGGGGTTTGCGTCGCTACTTTTAGGAATTTCTCTGGCTCTGATGCTCTGTGGATCAGTTACCTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGATTATGTTTTTCTATGTCGCCGCGGTGGTTTCCTGTCTCTCCATGATCGGACGCTCGATTATCTGCTACGCCACGGCTCCGCCTAGAAAGGATATTCCAGCTTGGAAACTAATGTGA

Coding sequence (CDS)

ATGATGCAACGACACCAGCGAGACGGGGGGGAGTCGAGTGTTTTCTACGAGCTTTCTTCTCTTGTTATGAATATTCTCCGATCTCCTCCGCCGTCGATTCCGTTTCCCGATCATTCGCCGGTGGTTTCAACCGCCTCATCGTCGCGACGGACGATTCCAGCGCAGATAACTCCGGCGGGGTTTGCGTCGCTACTTTTAGGAATTTCTCTGGCTCTGATGCTCTGTGGATCAGTTACCTTCTTCATCGGCTTCATGATGATGCCTTGGGTTATTGGATTGATTATGTTTTTCTATGTCGCCGCGGTGGTTTCCTGTCTCTCCATGATCGGACGCTCGATTATCTGCTACGCCACGGCTCCGCCTAGAAAGGATATTCCAGCTTGGAAACTAATGTGA

Protein sequence

MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAPPRKDIPAWKLM*
Homology
[Close]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match: XP_004152133.2 (uncharacterized protein LOC101218967 isoform X3 [Cucumis sativus] >KGN53019.1 hypothetical protein Csa_015389 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIPAWKLM 132
           PRKDIPAWKLM
Sbjct: 121 PRKDIPAWKLM 131

[Close]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match: XP_008454051.1 (PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo])

HSP 1 Score: 243.0 bits (619), Expect = 1.4e-60
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQR QRDGGESSVFYELSSLVMNILR+PP SIPF DHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIPAWKLM 132
           PRKDIPAWKLM
Sbjct: 121 PRKDIPAWKLM 131

[Close]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match: XP_031739870.1 (uncharacterized protein LOC101218967 isoform X1 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIP 127
           PRKDIP
Sbjct: 121 PRKDIP 126

[Close]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match: XP_031739871.1 (uncharacterized protein LOC101218967 isoform X2 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 3.1e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIP 127
           PRKDIP
Sbjct: 121 PRKDIP 126

[Close]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match: XP_038904470.1 (uncharacterized protein LOC120090836 isoform X1 [Benincasa hispida])

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-57
Identity = 121/131 (92.37%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQR QRDGG+SSVFYE SSLVMNILRSPP SIPF DHSPVV+TA SSRR+ PAQITPAG
Sbjct: 1   MMQRQQRDGGQSSVFYEFSSLVMNILRSPPSSIPFSDHSPVVTTA-SSRRSFPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIPAWKLM 132
           PRKDIPAWKLM
Sbjct: 121 PRKDIPAWKLM 130

[Close]
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match: A0A0A0KW01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 3.9e-64
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIPAWKLM 132
           PRKDIPAWKLM
Sbjct: 121 PRKDIPAWKLM 131

[Close]
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match: A0A1S3BX78 (uncharacterized protein LOC103494590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494590 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 6.8e-61
Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQR QRDGGESSVFYELSSLVMNILR+PP SIPF DHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIPAWKLM 132
           PRKDIPAWKLM
Sbjct: 121 PRKDIPAWKLM 131

[Close]
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match: A0A5A7TRR9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001820 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQR QRDGGESSVFYELSSLVMNILR+PP SIPF DHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIP 127
           PRKDIP
Sbjct: 121 PRKDIP 126

[Close]
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match: A0A1S3BYH6 (uncharacterized protein LOC103494590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494590 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MMQR QRDGGESSVFYELSSLVMNILR+PP SIPF DHSPVVSTASSSRRTIPAQITPAG
Sbjct: 1   MMQRQQRDGGESSVFYELSSLVMNILRTPPSSIPFSDHSPVVSTASSSRRTIPAQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSIICYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIICYATAP 120

Query: 121 PRKDIP 127
           PRKDIP
Sbjct: 121 PRKDIP 126

[Close]
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match: A0A6J1INR6 (uncharacterized protein LOC111479165 OS=Cucurbita maxima OX=3661 GN=LOC111479165 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.1e-47
Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MMQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDHSPVVSTASSSRRTIPAQITPAG 60
           MM+R Q+D  +SSVFYELSSLVMNILRSPP +IP  D S +VS A SSRR IP QITPAG
Sbjct: 1   MMRRQQQD-EQSSVFYELSSLVMNILRSPPSAIPSSDQSSMVS-AVSSRRPIPMQITPAG 60

Query: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRSIICYATAP 120
           FASLLLGISLALMLCGSVTFFIGFMMMPWVIGL+MFFYVAAVVSCLSMIGRSI CYATAP
Sbjct: 61  FASLLLGISLALMLCGSVTFFIGFMMMPWVIGLVMFFYVAAVVSCLSMIGRSIFCYATAP 120

Query: 121 PRKDIPAWKLM 132
            R+DIPAWKLM
Sbjct: 121 SRQDIPAWKLM 129

[Close]
BLAST of CsaV3_4G002780 vs. TAIR 10
Match: AT1G27290.1 (unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 82/142 (57.75%), Postives = 99/142 (69.72%), Query Frame = 0 

Query: 2   MQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDH---------SPVVSTASSSRRTI 61
           M R QRD  +S VFY+LSSLV+N+LRSPP  I  PDH          P  S   SS    
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 62  PAQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRS 121
            A I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ LI+ FYVA +VS +SM+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

Query: 122 IICYATAPPR---KDIPAWKLM 132
           I+CY   PP    K+I  WKL+
Sbjct: 121 ILCYVLTPPSPSGKEISEWKLL 142

[Close]
BLAST of CsaV3_4G002780 vs. TAIR 10
Match: AT1G27290.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 82/142 (57.75%), Postives = 99/142 (69.72%), Query Frame = 0 

Query: 2   MQRHQRDGGESSVFYELSSLVMNILRSPPPSIPFPDH---------SPVVSTASSSRRTI 61
           M R QRD  +S VFY+LSSLV+N+LRSPP  I  PDH          P  S   SS    
Sbjct: 1   MMRRQRDEQQSRVFYDLSSLVLNLLRSPPMPISLPDHFPDPPARIRPPFSSHRFSSSSPS 60

Query: 62  PAQITPAGFASLLLGISLALMLCGSVTFFIGFMMMPWVIGLIMFFYVAAVVSCLSMIGRS 121
            A I+P+GFASLLLGIS+ALMLCGSVTFFIGF++MPWV+ LI+ FYVA +VS +SM+GRS
Sbjct: 61  LAHISPSGFASLLLGISVALMLCGSVTFFIGFLLMPWVLALILVFYVAGIVSAISMVGRS 120

Query: 122 IICYATAPPR---KDIPAWKLM 132
           I+CY   PP    K+I  WKL+
Sbjct: 121 ILCYVLTPPSPSGKEISEWKLL 142

The following BLAST results are available for this feature:
BLAST of CsaV3_4G002780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152133.28.0e-64100.00uncharacterized protein LOC101218967 isoform X3 [Cucumis sativus] >KGN53019.1 hy... [more]
XP_008454051.11.4e-6096.18PREDICTED: uncharacterized protein LOC103494590 isoform X2 [Cucumis melo][more]
XP_031739870.13.1e-60100.00uncharacterized protein LOC101218967 isoform X1 [Cucumis sativus][more]
XP_031739871.13.1e-60100.00uncharacterized protein LOC101218967 isoform X2 [Cucumis sativus][more]
XP_038904470.15.5e-5792.37uncharacterized protein LOC120090836 isoform X1 [Benincasa hispida][more]
BLAST of CsaV3_4G002780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G002780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW013.9e-64100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011660 PE=4 SV=1[more]
A0A1S3BX786.8e-6196.18uncharacterized protein LOC103494590 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TRR92.7e-5796.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BYH62.7e-5796.03uncharacterized protein LOC103494590 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1INR61.1e-4783.97uncharacterized protein LOC111479165 OS=Cucurbita maxima OX=3661 GN=LOC111479165... [more]
BLAST of CsaV3_4G002780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G27290.11.3e-3557.75unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bac... [more]
AT1G27290.21.3e-3557.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34781:SF4PROTEIN, PUTATIVE-RELATEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR34781TRANSMEMBRANE PROTEINcoord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G002780.1CsaV3_4G002780.1mRNA