CsaV3_4G001950 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G001950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Signal recognition particle 54 kDa protein
Location	chr4: 1143890 .. 1149382 (-)
RNA-Seq Expression	CsaV3_4G001950
Synteny	CsaV3_4G001950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATTGCAATTATCATTTGGAAAAAAAAGGGGAAAAAGCCGAGAGGTGGGATCTGCTGCGGGCAGGTCCTTGATATTATAAAATGGTTCTTTTTTTGTTTATGTACCATCGGATTTTTGATGTTCAACTTCTGAAAGGCGAAGAGGAAGGTTGGTTAAATTTTTCAGAAACCCCCAAATCGGAACCCTAATTCAAAACCTCTCTTAATCGATCAACAATTCGGATTCAGATTTCGAAGAATCGGCAAAGATGGTGTTAGCACAGCTTGGGGGGAGCATTTCTCGTGCTCTCCAGCAGATGAGCAGCGCGACGGTGATCGACGAGAAAGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGATATGCAGACCAATATCAAGAAAATTGTTAATCTCGATGACCTCGCTGCCGGTCACAATAAGCGCAAGATCATTCAACAGGTATTCTTCATTTCCTTTTGTATTTTTTGTTTTCCTTTTTTCTATCTTTTATTGTCTTTTTTGTTGATTTGGTTTTGTAGAGTTATTCTATGAAACTAGAGTCGATTCTGAGAGTTGTAGCTGAATTTCGAACGAGTTTCTTAATACATGTCCATATAGTGGATTAAGGGAAATGCAAAATCTTTCTGAATTCTGAGCGTTATTAATTGTGTTTATATATATTTTTCGAAGTTTATAGATATGGCATGTGGTGGGATTTGTATAGTTTAGGATTGTTGTTGCAATTAGTTATTTTCCATTCCACGAAATGCAATACAAATGCTTTTGTAGAGATAACCGACCTTTATGTCTCTAGAGTTGGTTGGTACTTCCTGGGGCTTCATTGTTCTATGTGACTCTTGAGTTTTGTTCAATTCTAGAGATGATCAGAGCTGCTTGGCCTTATCCATTCACTTTGCCTGCTTGGATGACCGGTCTGTTTGGGTTATTGGTGTTCATGGAATTACCACCTACCCGATGAGGAACTCATTTTGGGATGAGTTGGATTATCTATTATATTTTCGTGGTCATTTTTGGGATTTGGCTGGGGATTCTAACGTTACCAGTCTTTCTTTTGTTAAGGGGATAGAACCACCAAGTGTATGGGGGCTCTCAATAGCTATGTAACTTATGTTGTAGATTGGTTCATCCTAACCTGAATGGATCTATCACTTGGTCTAGTCTTTCTGCTCAATGTCAACGAGCTGTAGTATAGACCTACTCTTGCTTTCTAGATGTTGGATGGATGTTTGTTTAGAACATTGAACAATCCCAATACCCTAGATCTATTTCAAATCTTTTGTTTACCCCTTTATTTACTTGTTTTATTAAAATGGGGTTCTCCTTCCTTCTGGATGGCTTGATGAAAGAAGTGCAATCTCAAAAAGCTAATGCAATTCATTTGGCATACTATAGTTCTGCCCTTCTTAAACATTACATTTCTTTTGATGGACATCTTTAGAACTTGTGCGATGGGACCCATCTAATGAAATTCGTAACTCATTTATTTTAAGATTTACCTATTTGTATCATTATTGGTATTTGGAGCTAGGTTTTAAGATGTTTTCTCTTCTCCCTCTGTAGGCTGTATTTAATGAACTGTGCAAAATGCTAGATCCTGGAAAGCCTTCTTTTACACCAAAGAAAGGAAAAACAAGTGTTGTCATGTTTGTTGGTTTGCAAGGTATGTTACAGGTGTAACATTGTTGTCTTTATTACCTGTTTAAAGATCCACTTAAATGTGGCTTTCTACCATGTAGAATGATGAGGGTTTGTACTGTTATCATCATTACTTGTTAGTCACTATTTTTTCTTTATGTTATTGATTAATCTTTACTTTTTTAAATATTTAAAATTCAGGGTCTGGGAAAACCACAACATGTACTAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCTTTGGTCTGTGCAGATACATTCAGAGCTGGTGCTTTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGGTAGGGTAGTTCATATATACTATTTTTACCGTTCATTTATGTGATCGTGGAAGCATGGTTTAGTCTTATTGGAAAGAATAGGAACCATATATGAGGGGTGGTTTTACCAAATTGGTTATTTAGTTATCATTTTACAGTTTTATTGTAGTATCCTACCTCGAACTTTTTCTGCTACGAGGAAAATACTTTATATTATTGCATGCATTGATCCTTTTGTTTGAGAGTATTAGACTCTTAATCTTTCTTCTTTTAGCATAGCACATTTGTGATATGGTTGGGGATGGGAATGGGTGAGGTATGGAAGAAGTAGGAGGTGTGTTTCCTTTATAGTTTATGGTTCTGGGCGTGTCCCGGACCTTAAAAATGTAAATTCATGTGTGTGATTTTGGTCATTTTTTTCTTGTTCTTTTTTGTTTATACTTTTATGGGTTGGAGTTTTCTTCCTCTCTCAGTGTGCTTGATTTATTAGTCAAGTTGTCATTCAGTATTTCAATTTTTCTTTATTTCCCCATTTTGTAGTTACATGGAATCGGATCCTGTTAAAATTGCGGTAGAAGGTGTGGAAAGATTCAAGAAAGAAAGTTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAGGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCGACGGTATTTTTCTTGTCTTATTATTTTATGGCCATTTGATGATAACTTGTTAAAATTTCTGACTGTTCTTTGCGTTGTCTAGAAACCGGATCTCGTTATATTTGTCATGGATAGCAGTATCGGTCAAGCGGCATTTGACCAGGCTCAAGCATTTAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAGATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCGTAAGTTTCAAAACTTTTGTTTTCCCTTTCTGGGGACGAAGAACCATACTGAAGGATGCTAACTTTGTGCAAATTGTTTTACCAAAGTTTTATTTTGCTTCATAGTTTGTTAGCCTTGTGGAATTTATCAGTTGAAATTCTTCAGATTTTTCTTTGATTAAATGACCTGGTTATTACTTGGTTAAATTGATGCATAGAGTATTATGAACTAAATCTCTTTCCTCAATTTCTACTTATTGTTGCAGTGTTGCAGCAACAAAGAGTCCGGTTATTTTCATTGGAACAGGAGAACATATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTTCTAGGTGATTTTTCGATTGAATCTAAACTTTTTGCATTAGCTGCCTGTTGTTACCTGTTTATTAAGCGACTGCATCATTTGTTTAGGCATGGGAGACTGGTCTGGTTTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGATCAGTTTCAGAACTTACTTAAGATGGGTCCAATTAACCAGGTATTACTTGCATCGGGTATAATATACTGTAATTTTATTGTTTGCTCCTGTCATATTTTAGAAGAAAAAGTGGGTTGACCTTTTGAAATTTCTAAGGGAGATTTGGTGGTAGTAGTGTGACTCAAGGGGTTTTTTGGTGGTAGTACTATGACTTAAGGGGTTATTTGGGAGGCATGAATGTAATGAAGATTACTGAAGATCGTAGGGGCATTGGAATGAGTTGGGAATCGAGGGCATAACGGGAATGGGATTGTGAAGCATCAAAATGGTTGGAAGGGAGTTGGGTTGAAAATTTTGGAAAGTGAATGAGTTTGATATTACAAAATGGACCCAAAATGCAAACATAGGCTGGAATCAAAACCCACGACAAACTCATTCCACTCCATCCTCCCAACATGCCCTAAAGGTTTGTTGTAGTAAGAGTTGTTTCTCTTGTTCAGTTCTAATCTTTACACTCACAAAATGGCAAGATTAATGCTTTTGATACAAGTCTTAGAAATACCTTCTGTTTCTTACAATACTACACTTTATAGGGGAAGATCGGGTTGTATCCTATTCCTACACATACTTATTTACAGAAGCATTTATTCTACAACTTCCATAGCAAAAAGGTTTTTAATTGGTAAGGTGGAGATATTGAGATCCAGAGCATTATAAGTGTGGCTAGCCGAGTTCACGGGATAAAAAATTGAGAGAATGCGTGTTCTTATGTAATTTGAACATAGGCCTGCTCTAAATAATTGGTAATACTAGGATTGCTTATTCTGAAAAGTAGGTGGGTCAAGCTTCTAATTCTCTTTTTGAAGTTGGTCTTTTCATTAATAAATTCTTGAATAAACGTATAGGCAGTACTCTAAGAACTGGTCTCTTTAGGTATTTTCAATGCTACCCGGATATAGTGCTGATTTGATGCCAAAAGGACGTGAAAAGGAAAGCCAGGCGAAACTTAAGCGGTACATGACTATGATGGACTCAATGACGGATGAAGGCTAGTAGAAATTATCCACATATCCTTCCCTTCTTATTTTGCTGTGGATATTTTGTCCTGGTTGAATTTGGTGCTAAATGATCCTTTAATATTTTAAACAGAATTGGATAGCACAAACCCAAAGCTCATAAACGAGTCGCGAATGATGCGAATAGCACGAGGTTCAGGTCACCGTGTTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGTCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCACTATCACGAAATATGAACGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGTGGAATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCAAATAAAGATATGATGGGAATGTTTGGAGGTGGAGATAAGTAGAGCTTTGATTCGAAGTTTGGTTCGAATTCTCTTATTCCAACAAGATCGTCTTTCAGAACGTGTGGCAATACTGATCTTCTACAGGGAAAAACACGACGACGTCGACGATTTCACTGGATTGATTAAGCCATCGAACAAATATGTATATTTATTTGTTCTCTGGTGCATGGTTACAGTTGCGACGGTTCGAGCTAATTATTTTTACCCCGTTTTTTGACTCGGTAATTTCACCACAGCCACAACCATCCCTTGTACTTTGTTCAAGATGTTTAAAATGTTTAGCAACGAAATAGATTTTTTATGCTTTCTGTGTCAATTTATAAATAGAGTTTTAACACTTTGCATTTGTTCAACTTCTAACTTTACTGATTTCTCTCTCTTTCAAATTAGGGTGGTTTTAATTGTTGTGTGTTAAAACAAGTATATTGAAAAATTGACATTCACATGCACAAATTTTACCAACTCGATCAATTTTACAAAAACTGAAAATGCCATTATTTGTAGCCTATATTTGATCACAAGTATGTGATGTTACATGAACATTATAAGTGTGTAG

mRNA sequence

ATGGTGTTAGCACAGCTTGGGGGGAGCATTTCTCGTGCTCTCCAGCAGATGAGCAGCGCGACGGTGATCGACGAGAAAGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGATATGCAGACCAATATCAAGAAAATTGTTAATCTCGATGACCTCGCTGCCGGTCACAATAAGCGCAAGATCATTCAACAGGCTGTATTTAATGAACTGTGCAAAATGCTAGATCCTGGAAAGCCTTCTTTTACACCAAAGAAAGGAAAAACAAGTGTTGTCATGTTTGTTGGTTTGCAAGGGTCTGGGAAAACCACAACATGTACTAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCTTTGGTCTGTGCAGATACATTCAGAGCTGGTGCTTTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCGGATCCTGTTAAAATTGCGGTAGAAGGTGTGGAAAGATTCAAGAAAGAAAGTTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAGGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCGACGAAACCGGATCTCGTTATATTTGTCATGGATAGCAGTATCGGTCAAGCGGCATTTGACCAGGCTCAAGCATTTAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAGATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCGGTTATTTTCATTGGAACAGGAGAACATATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTTCTAGGCATGGGAGACTGGTCTGGTTTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGATCAGTTTCAGAACTTACTTAAGATGGGTCCAATTAACCAGGTATTTTCAATGCTACCCGGATATAGTGCTGATTTGATGCCAAAAGGACGTGAAAAGGAAAGCCAGGCGAAACTTAAGCGGTACATGACTATGATGGACTCAATGACGGATGAAGAATTGGATAGCACAAACCCAAAGCTCATAAACGAGTCGCGAATGATGCGAATAGCACGAGGTTCAGGTCACCGTGTTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGTCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCACTATCACGAAATATGAACGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGTGGAATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCAAATAAAGATATGATGGGAATGTTTGGAGGTGGAGATAAGTAG

Coding sequence (CDS)

ATGGTGTTAGCACAGCTTGGGGGGAGCATTTCTCGTGCTCTCCAGCAGATGAGCAGCGCGACGGTGATCGACGAGAAAGTTTTGAACGAATGTCTCAACGAGATCACCCGCGCTCTTCTTCAATCCGATGTCCAATTCAAGCTTGTCCGTGATATGCAGACCAATATCAAGAAAATTGTTAATCTCGATGACCTCGCTGCCGGTCACAATAAGCGCAAGATCATTCAACAGGCTGTATTTAATGAACTGTGCAAAATGCTAGATCCTGGAAAGCCTTCTTTTACACCAAAGAAAGGAAAAACAAGTGTTGTCATGTTTGTTGGTTTGCAAGGGTCTGGGAAAACCACAACATGTACTAAGTACGCATATTATCATCAGAAGAAAGGCTGGAAGCCTGCTTTGGTCTGTGCAGATACATTCAGAGCTGGTGCTTTTGATCAATTGAAGCAGAATGCAACCAAAGCAAAGATTCCCTTTTATGGAAGTTACATGGAATCGGATCCTGTTAAAATTGCGGTAGAAGGTGTGGAAAGATTCAAGAAAGAAAGTTGTGATCTCATAATTGTTGATACCAGTGGGCGTCACAAACAGGAAGCTGCTCTTTTTGAAGAAATGCGTCAAGTTTCTGAAGCGACGAAACCGGATCTCGTTATATTTGTCATGGATAGCAGTATCGGTCAAGCGGCATTTGACCAGGCTCAAGCATTTAAACAAAGTGTTGCAGTTGGTGCTGTGATTGTGACCAAGATGGATGGTCACGCAAAGGGAGGTGGTGCTCTTAGTGCTGTTGCAGCAACAAAGAGTCCGGTTATTTTCATTGGAACAGGAGAACATATGGATGAGTTTGAAGTTTTTGATGTTAAACCATTTGTCAGCCGTCTTCTAGGCATGGGAGACTGGTCTGGTTTCATGGATAAAATTCATGAAGTCGTGCCAATGGATCAGCAACCAGAGCTTTTGCAAAAGCTTTCAGAAGGAAATTTTACTTTGAGAATTATGTACGATCAGTTTCAGAACTTACTTAAGATGGGTCCAATTAACCAGGTATTTTCAATGCTACCCGGATATAGTGCTGATTTGATGCCAAAAGGACGTGAAAAGGAAAGCCAGGCGAAACTTAAGCGGTACATGACTATGATGGACTCAATGACGGATGAAGAATTGGATAGCACAAACCCAAAGCTCATAAACGAGTCGCGAATGATGCGAATAGCACGAGGTTCAGGTCACCGTGTTCAGGAAGTAATGGAAATGATGGAAGAGTACAAGCGTCTCGCCAAGGTATGGAGCAAGATGAAAGGGCTGAAGATCCCAAAGAAGGGCGAAATGAGCGCACTATCACGAAATATGAACGCACAGCACATGAGTAAGGTCCTTCCTCCCCAGATTTTGAAGCAAATTGGTGGAATGGGTGGCTTACAGAGCTTGATGAAGCAAATGGGTTCAAATAAAGATATGATGGGAATGTTTGGAGGTGGAGATAAGTAG

Protein sequence

MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVNLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADLMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMMEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQMGSNKDMMGMFGGGDK*

Homology

[Close]

BLAST of CsaV3_4G001950 vs. NCBI nr
Match: XP_004152178.1 (signal recognition particle 54 kDa protein 2 [Cucumis sativus] >KGN52936.1 hypothetical protein Csa_014900 [Cucumis sativus])

HSP 1 Score: 967.6 bits (2500), Expect = 4.1e-278
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. NCBI nr
Match: XP_038876730.1 (signal recognition particle 54 kDa protein 2 [Benincasa hispida])

HSP 1 Score: 952.6 bits (2461), Expect = 1.4e-273
Identity = 486/495 (98.18%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSIS ALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISHALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQNLLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKL+NESRMMRIARGSG RVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. NCBI nr
Match: XP_008454178.1 (PREDICTED: signal recognition particle 54 kDa protein 2 [Cucumis melo])

HSP 1 Score: 952.2 bits (2460), Expect = 1.8e-273
Identity = 487/495 (98.38%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQ+LLKMGPI+QVFSMLPG SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSG RVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. NCBI nr
Match: XP_022998349.1 (signal recognition particle 54 kDa protein 2 [Cucurbita maxima])

HSP 1 Score: 949.9 bits (2454), Expect = 8.8e-273
Identity = 483/495 (97.58%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQNLLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDS+NPKL+NESRMMRIARGSG R+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. NCBI nr
Match: XP_023523909.1 (signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523910.1 signal recognition particle 54 kDa protein 2 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523911.1 signal recognition particle 54 kDa protein 2 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949.5 bits (2453), Expect = 1.1e-272
Identity = 482/495 (97.37%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQNLLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDS+NPKL+NESRMMR+ARGSG R+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot
Match: P49972 (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 906.7 bits (2342), Expect = 1.1e-262
Identity = 459/499 (91.98%), Postives = 485/499 (97.19%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGGSISRALQQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAELGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMTTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR+IIQQAVFNELCK+LDPGKPSFTPKKGK S+VMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRRIIQQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAV+GVE FK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEG+FTLRIMY+QFQN+LKMGPI QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKMGPIGQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGRE ESQAK+KRYMTMMDSMT+EELDS+NPKL+ +SR+MRIARGSG +V EVM+MME
Sbjct: 361 MPKGRENESQAKIKRYMTMMDSMTNEELDSSNPKLMTDSRIMRIARGSGRQVHEVMDMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM 480

Query: 481 GSNKDMM----GMFGGGDK 496
           GS KDMM    GMFGGGDK
Sbjct: 481 GSAKDMMGGMGGMFGGGDK 499

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot
Match: P49967 (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=SRP-54C PE=2 SV=2)

HSP 1 Score: 875.2 bits (2260), Expect = 3.6e-253
Identity = 434/495 (87.68%), Postives = 475/495 (95.96%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMS+ T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SVVMFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMYDQFQN+L MGP+ +VFSMLPG SA++
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKG EKESQAK+KRYMTMMDSMT++ELDS+NPK+ NESRMMRIARGSG +V+EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GS KDMMGMFGGGDK
Sbjct: 481 GSGKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot
Match: P49971 (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 2.0e-248
Identity = 439/494 (88.87%), Postives = 475/494 (96.15%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+AT+IDEKVLNECLNEITRALLQ+DVQFKLVRDM TNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATIIDEKVLNECLNEITRALLQADVQFKLVRDMSTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+IIQQAV+NELCK+LDPGKP+FT KKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIQQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYG-SYMESDPVKIAVEGVERF 180
           YAY+HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYG SY ESDPVKIAV+GVE F
Sbjct: 121 YAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETF 180

Query: 181 KKESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQS 240
           KKE+CDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIGQAAFDQAQAF+QS
Sbjct: 181 KKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQS 240

Query: 241 VAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300
           VAVGAVIVTKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD
Sbjct: 241 VAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD 300

Query: 301 WSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSAD 360
            SG ++KI +VVPMDQQPELLQKLSEG+FTLRIMY+QFQ++LKMGP+  VFSMLPG+SA+
Sbjct: 301 LSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKMGPLG-VFSMLPGFSAE 360

Query: 361 LMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMM 420
           +MP+GREKESQAK KRYMTMMDSMTDEELDSTNPK++ ESR+MRIARGSG  V EVMEM+
Sbjct: 361 MMPQGREKESQAKFKRYMTMMDSMTDEELDSTNPKILTESRIMRIARGSGRLVHEVMEML 420

Query: 421 EEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQ 480
           EEYKRLAK++SKMKGLKIPKKG+MS+LSRNMNAQ+MSKVLPPQ+LKQIGGMGGLQ+LMKQ
Sbjct: 421 EEYKRLAKIFSKMKGLKIPKKGDMSSLSRNMNAQNMSKVLPPQMLKQIGGMGGLQNLMKQ 480

Query: 481 MGSNKDMMGMFGGG 494
           MGS KDMMGMFGGG
Sbjct: 481 MGSAKDMMGMFGGG 493

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot
Match: P49969 (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54-2 PE=2 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 9.8e-235
Identity = 409/492 (83.13%), Postives = 458/492 (93.09%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMS+ATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FTPKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+ DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPG+S++L
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKG EKE QAK+KRYMT+MDSMT  ELDSTNPKL+ ESR++RIARGSG ++++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480

Query: 481 GSNKDMMGMFGG 493
           G  KDM  M GG
Sbjct: 481 G-GKDMSKMLGG 491

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot
Match: P49968 (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54-1 PE=2 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 8.3e-234
Identity = 408/492 (82.93%), Postives = 457/492 (92.89%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRAL QMS+ATVIDEKVL ECLNEI+RALLQSDVQFK+VRDMQTNI+KIV
Sbjct: 1   MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+ LAAG NKR+IIQQAVF ELC MLDPGKP+FT KKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEG+ERF+
Sbjct: 121 YAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFR 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+ DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIGQAAFDQAQAFKQS 
Sbjct: 181 KENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGD 
Sbjct: 241 SVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDL 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SG MDKI +V+P DQQPELL KL+EG FTLR++Y+QFQNLLKMGPI QVFSMLPG+S++L
Sbjct: 301 SGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKMGPIGQVFSMLPGFSSEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKG EKE QAK+KRYMT+MDSMT  ELDSTNPKL+ ESR++RIARGSG ++++V +M+E
Sbjct: 361 MPKGHEKEGQAKIKRYMTIMDSMTAAELDSTNPKLMTESRIIRIARGSGRQIRDVTDMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLK+PK G+MS LS+N+N Q M+K LPPQ+LKQ+GGMGGLQ+LMKQM
Sbjct: 421 EYKRLAKMWSKMKGLKMPKNGKMSDLSQNLNIQQMTKALPPQVLKQMGGMGGLQALMKQM 480

Query: 481 GSNKDMMGMFGG 493
           G  KDM  M GG
Sbjct: 481 G-GKDMSKMLGG 491

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL
Match: A0A0A0KYL0 (Signal recognition particle 54 kDa protein OS=Cucumis sativus OX=3659 GN=Csa_4G006430 PE=3 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.0e-278
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL
Match: A0A1S3BY04 (Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494661 PE=3 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 8.5e-274
Identity = 487/495 (98.38%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQ+LLKMGPI+QVFSMLPG SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQSLLKMGPISQVFSMLPGVSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSG RVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL
Match: A0A6J1KE35 (Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111493016 PE=3 SV=1)

HSP 1 Score: 949.9 bits (2454), Expect = 4.2e-273
Identity = 483/495 (97.58%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQNLLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDS+NPKL+NESRMMRIARGSG R+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL
Match: A0A6J1G940 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111452092 PE=3 SV=1)

HSP 1 Score: 947.2 bits (2447), Expect = 2.7e-272
Identity = 481/495 (97.17%), Postives = 492/495 (99.39%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSV+MFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVIMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIG GEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGIGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQNLLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDS+NPKL+NESRMMR+ARGSG R+QEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRVARGSGRRIQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL
Match: A0A6J1GTY4 (Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC111457512 PE=3 SV=1)

HSP 1 Score: 946.0 bits (2444), Expect = 6.1e-272
Identity = 483/495 (97.58%), Postives = 491/495 (99.19%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLAQLGGSISRALQQMS+ATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
Sbjct: 1   MVLAQLGGSISRALQQMSNATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTK
Sbjct: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIA EGVERFK
Sbjct: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAEEGVERFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMY+QFQ LLKMGPI+QVFSMLPG+SA+L
Sbjct: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQKLLKMGPISQVFSMLPGFSAEL 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKGREKESQAKLKRYMTMMDSMTDEELDS+NPKL+NESRMMRIARGSG RVQEVMEMME
Sbjct: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSSNPKLMNESRMMRIARGSGRRVQEVMEMME 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GSNKDMMGMFGGGDK
Sbjct: 481 GSNKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 875.2 bits (2260), Expect = 2.6e-254
Identity = 434/495 (87.68%), Postives = 475/495 (95.96%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMS+ T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SVVMFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMYDQFQN+L MGP+ +VFSMLPG SA++
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKG EKESQAK+KRYMTMMDSMT++ELDS+NPK+ NESRMMRIARGSG +V+EVMEM+E
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKRLAK+WSKMKGLKIPK G+MSALSRNMNAQHMSKVLPPQ+LKQIGGMGGLQSLMKQM
Sbjct: 421 EYKRLAKIWSKMKGLKIPKNGDMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQSLMKQM 480

Query: 481 GSNKDMMGMFGGGDK 496
           GS KDMMGMFGGGDK
Sbjct: 481 GSGKDMMGMFGGGDK 495

[Close]

BLAST of CsaV3_4G001950 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 763.5 bits (1970), Expect = 1.1e-220
Identity = 391/495 (78.99%), Postives = 440/495 (88.89%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQM++ T+IDEKVLN+ LNEITRALLQSDV F LV  MQTNIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMNNVTIIDEKVLNDFLNEITRALLQSDVSFGLVEKMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NLDDLAAGHNKR II+QA+F ELC+MLDPGKP+F PKK K SVVMFVGLQG+GKTTTCTK
Sbjct: 61  NLDDLAAGHNKRLIIEQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+RFK
Sbjct: 121 YAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIGQAAF+QA+AFK++V
Sbjct: 181 KEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           +VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GDW
Sbjct: 241 SVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SG +DK+ EVVP D Q EL++ LS+GNFTLR MYDQFQ  L++ P+NQ+FSMLPG SA++
Sbjct: 301 SGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI-PLNQLFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEMME 420
           MPKG  +ES+ K+KRYMTMMDSMT++ELDS NPK+ NESR+MRIARGSG  V+EVMEM+E
Sbjct: 361 MPKGHGEESRVKMKRYMTMMDSMTNKELDSPNPKIFNESRIMRIARGSGRLVREVMEMLE 420

Query: 421 EYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMKQM 480
           EYKR+AK    MKG+KIPK G+            MSKV+PPQ+LKQ+GGM GLQSLMKQM
Sbjct: 421 EYKRIAKT---MKGIKIPKNGD------------MSKVIPPQMLKQMGGMSGLQSLMKQM 479

Query: 481 GSNKDMMGMFGGGDK 496
           GS KDMMGMFGGG K
Sbjct: 481 GSAKDMMGMFGGGGK 479

[Close]

BLAST of CsaV3_4G001950 vs. TAIR 10
Match: AT5G49500.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 758.1 bits (1956), Expect = 4.5e-219
Identity = 384/497 (77.26%), Postives = 439/497 (88.33%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I  A+Q+M++ T+IDEK LN+CLNEITRALLQSDV F LV++MQTNIKKIV
Sbjct: 1   MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGS--GKTTTC 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGK +F PKK K SVVMFVGLQG    K    
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLV 120

Query: 121 TKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVER 180
                  ++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSY  SDPVKIAVEGV+R
Sbjct: 121 PSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDR 180

Query: 181 FKKESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQ 240
           FKKE+CDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIGQ AF+QA+AFKQ
Sbjct: 181 FKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQ 240

Query: 241 SVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMG 300
           +VAVGAVI+TKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG G
Sbjct: 241 TVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNG 300

Query: 301 DWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSA 360
           D SGF++K+ EVVP DQQPELL+ LS G FTLRIMYDQFQN+L MGP+ +VFSMLPG  A
Sbjct: 301 DMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRA 360

Query: 361 DLMPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEM 420
           ++MP+G EKESQAK+KRYMTMMDSMT+EELDS+NPK+ NESR+MRIARGSG  V+EVMEM
Sbjct: 361 EMMPEGHEKESQAKIKRYMTMMDSMTNEELDSSNPKVFNESRIMRIARGSGRIVREVMEM 420

Query: 421 MEEYKRLAKVWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 480
           +EEYKRL  +W K+KGLK  +KG MSALS+N N+Q +SKVLP Q+LKQIGGM GLQSLMK
Sbjct: 421 LEEYKRLTTMWGKVKGLKNLEKGNMSALSKNKNSQQLSKVLPAQMLKQIGGMSGLQSLMK 480

Query: 481 QMGSNKDMMGMFGGGDK 496
           QMGS KD+MGMFGG D+
Sbjct: 481 QMGSGKDLMGMFGGRDE 497

[Close]

BLAST of CsaV3_4G001950 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 733.8 bits (1893), Expect = 9.2e-212
Identity = 362/418 (86.60%), Postives = 400/418 (95.69%), Query Frame = 0


Query: 1   MVLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV 60
           MVLA+LGG I+RA+QQMS+ T+IDEK LNECLNEITRALLQSDV F LV++MQ+NIKKIV
Sbjct: 1   MVLAELGGRITRAIQQMSNVTIIDEKALNECLNEITRALLQSDVSFPLVKEMQSNIKKIV 60

Query: 61  NLDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTK 120
           NL+DLAAGHNKR+II+QA+F+ELCKMLDPGKP+F PKK K SVVMFVGLQG+GKTTTCTK
Sbjct: 61  NLEDLAAGHNKRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTK 120

Query: 121 YAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK 180
           YAYYHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ FK
Sbjct: 121 YAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFK 180

Query: 181 KESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240
           KE+CDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
Sbjct: 181 KENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV 240

Query: 241 AVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300
           AVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW
Sbjct: 241 AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDW 300

Query: 301 SGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADL 360
           SGF+DK+ EVVP DQQPELL+KLS+GNFTLRIMYDQFQN+L MGP+ +VFSMLPG SA++
Sbjct: 301 SGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNMGPLKEVFSMLPGISAEM 360

Query: 361 MPKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINESRMMRIARGSGHRVQEVMEM 419
           MPKG EKESQAK+KRYMTMMDSMT++ELDS+NPK+ NESRMMRIARGSG +V+EVME+
Sbjct: 361 MPKGHEKESQAKIKRYMTMMDSMTNDELDSSNPKVFNESRMMRIARGSGRQVREVMEI 418

[Close]

BLAST of CsaV3_4G001950 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-50
Identity = 140/496 (28.23%), Postives = 243/496 (48.99%), Query Frame = 0


Query: 2   VLAQLGGSISRALQQMSSATVIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIVN 61
           +  QL G +  A  ++    V+ +  + E + +I RALL++DV   +VR    ++     
Sbjct: 77  MFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVSDQAV 136

Query: 62  LDDLAAGHNKRKIIQQAVFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKY 121
              +  G    + + + V +EL K++          K   +V++  GLQG GKTT C K 
Sbjct: 137 GMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKL 196

Query: 122 AYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKK 181
           A Y +K+G    L+  D +R  A DQL     +  +P Y +  +  P  IA +G++  KK
Sbjct: 197 ACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKK 256

Query: 182 ESCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA 241
            + D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  GQ A      F   + 
Sbjct: 257 NNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG 316

Query: 242 VGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWS 301
           +   I+TK+DG ++GG ALS    +  P+  +G GE M++ E F       R+LGMGD  
Sbjct: 317 ITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVL 376

Query: 302 GFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYDQFQNLLKMGPINQVFSMLPGYSADLM 361
            F++K  EV+  +   +L +K+    F       Q + + KMG + +V  M+PG     +
Sbjct: 377 SFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGK--V 436

Query: 362 PKGREKESQAKLKRYMTMMDSMTDEELDSTNPKLINES--RMMRIARGSGHRVQEVMEMM 421
              + +E++  L     M++ MT EE +   P+L+ ES  R  RIA+ SG   Q+V  ++
Sbjct: 437 SPAQIREAEKNLLVMEAMIEVMTPEERE--RPELLAESPERRKRIAKDSGKTEQQVSALV 496

Query: 422 EEYKRLAKVWSKMKGLK-IPKKGEMSALSRNMNAQHMSKVLPPQILKQIGGMGGLQSLMK 481
            +   + ++  KMK L  + + G + ALS   +A    +  PP   ++       +  ++
Sbjct: 497 AQ---IFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVE 556

Query: 482 QMGSNKDMMGMFGGGD 495
              S     G FG G+
Sbjct: 557 SASSKPGPRG-FGSGN 564

The following BLAST results are available for this feature:

BLAST of CsaV3_4G001950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152178.1	4.1e-278	100.00	signal recognition particle 54 kDa protein 2 [Cucumis sativus] >KGN52936.1 hypot...	[more]
XP_038876730.1	1.4e-273	98.18	signal recognition particle 54 kDa protein 2 [Benincasa hispida]	[more]
XP_008454178.1	1.8e-273	98.38	PREDICTED: signal recognition particle 54 kDa protein 2 [Cucumis melo]	[more]
XP_022998349.1	8.8e-273	97.58	signal recognition particle 54 kDa protein 2 [Cucurbita maxima]	[more]
XP_023523909.1	1.1e-272	97.37	signal recognition particle 54 kDa protein 2 isoform X1 [Cucurbita pepo subsp. p...	[more]

BLAST of CsaV3_4G001950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49972	1.1e-262	91.98	Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49967	3.6e-253	87.68	Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
P49971	2.0e-248	88.87	Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum OX=4081 PE=...	[more]
P49969	9.8e-235	83.13	Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]
P49968	8.3e-234	82.93	Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare OX=4513 GN=SRP54...	[more]

BLAST of CsaV3_4G001950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYL0	2.0e-278	100.00	Signal recognition particle 54 kDa protein OS=Cucumis sativus OX=3659 GN=Csa_4G0...	[more]
A0A1S3BY04	8.5e-274	98.38	Signal recognition particle 54 kDa protein OS=Cucumis melo OX=3656 GN=LOC1034946...	[more]
A0A6J1KE35	4.2e-273	97.58	Signal recognition particle 54 kDa protein OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G940	2.7e-272	97.17	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GTY4	6.1e-272	97.58	Signal recognition particle 54 kDa protein OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CsaV3_4G001950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48900.1	2.6e-254	87.68	Signal recognition particle, SRP54 subunit protein	[more]
AT1G15310.1	1.1e-220	78.99	signal recognition particle 54 kDa subunit	[more]
AT5G49500.1	4.5e-219	77.26	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	9.2e-212	86.60	Signal recognition particle, SRP54 subunit protein	[more]
AT5G03940.1	1.1e-50	28.23	chloroplast signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 100..277 e-value: 1.1E-4 score: 31.6
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 101..296 e-value: 7.1E-94 score: 327.9
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 102..296 e-value: 1.1E-77 score: 260.1
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 269..282
IPR013822	Signal recognition particle SRP54, helical bundle	SMART	SM00963	SRP54_N_2	coord: 2..87 e-value: 5.3E-13 score: 59.2
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 6..83 e-value: 1.7E-15 score: 57.0
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 5..306 e-value: 5.2E-127 score: 424.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 91..285 e-value: 5.2E-127 score: 424.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 95..298
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	GENE3D	1.10.260.30		coord: 312..436 e-value: 2.1E-43 score: 149.4
IPR036891	Signal recognition particle, SRP54 subunit, M-domain superfamily	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 298..433
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	PFAM	PF02978	SRP_SPB	coord: 327..428 e-value: 1.5E-28 score: 99.3
IPR006325	Signal recognition particle, SRP54 subunit, eukaryotic	TIGRFAM	TIGR01425	TIGR01425	coord: 2..427 e-value: 6.5E-225 score: 744.8
None	No IPR available	PANTHER	PTHR11564:SF33	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN	coord: 1..494
None	No IPR available	CDD	cd17875	SRP54_G	coord: 102..294 e-value: 3.81876E-140 score: 399.26
IPR022941	Signal recognition particle, SRP54 subunit	PANTHER	PTHR11564	SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54	coord: 1..494
IPR022941	Signal recognition particle, SRP54 subunit	HAMAP	MF_00306	SRP54	coord: 6..477 score: 35.265652
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 1..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G001950.1	CsaV3_4G001950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding