CsaV3_4G001310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G001310
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 745380 .. 745640 (-)
RNA-Seq ExpressionCsaV3_4G001310
SyntenyCsaV3_4G001310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAATCGAAGCGTAGTAGAAACCCTCAATCTGAGATTTGGGAAGAATTTGCCTGAAGCTAGGGTTTTGGGAATCGGAACGAGGACTCGACGGGAAGGAAGAGGATTTTAATGTTTCGACTGGCTCAGTGTATAGTCCGAAGAGAGAATCGACGGCGAACGAGGTCGGGTTATTTTTGGGGGAATTTCAGAATCTGTGATATCGGTCGGATTATTTGACCCGGAAACTCTACGGGACAACCCGAATCATTTGAAGTGA

mRNA sequence

ATGAGAAATCGAAGCGTAGTAGAAACCCTCAATCTGAGATTTGGGAAGAATTTGCCTGAAGCTAGGTCCGAAGAGAGAATCGACGGCGAACGAGGTCGGGTTATTTTTGGGGGAATTTCAGAATCTGTGATATCGGTCGGATTATTTGACCCGGAAACTCTACGGGACAACCCGAATCATTTGAAGTGA

Coding sequence (CDS)

ATGAGAAATCGAAGCGTAGTAGAAACCCTCAATCTGAGATTTGGGAAGAATTTGCCTGAAGCTAGGTCCGAAGAGAGAATCGACGGCGAACGAGGTCGGGTTATTTTTGGGGGAATTTCAGAATCTGTGATATCGGTCGGATTATTTGACCCGGAAACTCTACGGGACAACCCGAATCATTTGAAGTGA

Protein sequence

MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNHLK*
Homology
[Close]
BLAST of CsaV3_4G001310 vs. NCBI nr
Match: KGN52864.1 (hypothetical protein Csa_015087 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH 60
          MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH
Sbjct: 1  MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH 60

Query: 61 LK 63
          LK
Sbjct: 61 LK 62

[Close]
BLAST of CsaV3_4G001310 vs. ExPASy TrEMBL
Match: A0A0A0KVC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004260 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH 60
          MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH
Sbjct: 1  MRNRSVVETLNLRFGKNLPEARSEERIDGERGRVIFGGISESVISVGLFDPETLRDNPNH 60

Query: 61 LK 63
          LK
Sbjct: 61 LK 62

The following BLAST results are available for this feature:
BLAST of CsaV3_4G001310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52864.12.4e-26100.00hypothetical protein Csa_015087 [Cucumis sativus][more]
BLAST of CsaV3_4G001310 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G001310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVC41.2e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004260 PE=4 SV=1[more]
BLAST of CsaV3_4G001310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G001310.1CsaV3_4G001310.1mRNA