CsaV3_4G000750 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G000750
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	phytochrome A-associated F-box protein
Location	chr4: 425323 .. 427212 (-)
RNA-Seq Expression	CsaV3_4G000750
Synteny	CsaV3_4G000750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATTGGCTGGTGTTTTTATGATGCAAAGTTGGGAAATTTCTTTTGTGTGGACGCAAAACCAAAGAGCTAAAATGTGTGGATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGATTTTCACTTCTGCTTTTCCCATCATTCCTCATTCAATTTCCATTAACAAACATTAGAAAGAAGTGGAAGCAATGTTTTGGTAGCGCTTTTGTCTATAATTTAATATCATTTATTGCTTAACTTCTTTCCTTTTCTTGCCCGTTTCCATGAACTGAACACGAGTTTCCATTAAAACCGTTGCTATAGGTTTCATCTCTGAGGTACGATATTACTTGTATGAGGCCTATACATTTGAGTTTTACATGTTTCATTTAACCGGTAGCTGCTAAGGAGAGATAGCAGCTGAAATTTTGAGGACAAGAAGATATTTTAAGGAAATTTCCAGTTATAAGATGAGGAATAGCATAGCTTCAATTTTGGAGGATGATGAGGAGAAGTTCAAATGAAGCAACACTTAAAAGATAAGTTGAAACAAGAAACCTTGGTATTTTGTGCTTATAATCTTCTGTTTGTATTTGGTTGTTGTTAGGGAGCATTGTTTCCCAATTACTTAATTTAATGAAAGAAATGCTAAAAGACTATGTTCAGAGATTTGTAGGGCCAACCAAACTGTGTTTGGATGATCTATTTAGTGCTTTCTAGGTGTTTTTGGGTTAAATCAGTTCTTCTACAAGCACTTTCTTGAGTGATTCTTTTAGAAGTATTGAAGTATATTACTTTTGATTGTTG

mRNA sequence

ATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Coding sequence (CDS)

ATGCAAATGTTGAAGAAGACGACGACGACGACGACGACACCCTTCCACTTTCACCACCACCGACCCCTTTTCTCTCTTTCTTCTTCTTCTTCTTCTTCTTCACTCTCTCTTCCATTCTCAACCCCTCTTTTTCCAATGGCCGATTCTCTCTTCTCTACCCTTCCCGACGACATTCTTCTCAACATCTTCTTCAAGCTCGAAGACGATCCCCGCAACTGGGCTCGTTTAGCTTGTGTTTCCACCAAATTCTCCTGCACAATCCGCAACATCTGCTGGAAAACCAAGTGTTCCAACGCTATCCCTTCTCTCGTTTCCGATCTTCTCGTCGGGGACTCTATTCCTGCTGGTGGTTGGGCTTCCCTTCACAAGCTCGCTGTTTGTTGTCCTGGCCTCGTCCATTCCGGTGTTCTTCTTGAGAATTCTGATTTTGGGCTTGAGCGGGAACTGGGTCCGGATGAAAATTACATGAAATTGGGTTCTTCTCAATACTCCCAGCCCGAATCCAACCCTTCTTCTACGGCTTTATTTGAGGTTAATTCTGATCTCTCTGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGATTGTGCTTGGTCTCTTTACGACGATCTGTATTTGGATACTATGTATAATGATTCTGAAGCCCCTGATGTTCTCGACCCTCAAATTGGTTCTACCAAAGTGGAAAAAGGGGTTTTTATGACGGATAGGGAATTTTGTGTTTCAAAGAGGAGGAAGATCTGCAGGTCTATGCGGTCGCATTTGGCATCTGGGGTCTGGAATTTAAGCAGGGAGCAAGGGAATAAGCTGCTTCGGAGTCGATTTCGAGGTGATTCTCTTTACATTTGTGATTGGCCTGGATGTGTTCATATTGAAGAGAAACGGAATTACATGCTTTTTAGAGGGATTTTCAAGAATTTCAAAGGGTCTCATGTTTGGAGAACCATAAAAGATGGGAATAGGAACAAAATTGATCTGAATTGTGCGTTTTGTTCTTGTAAAGAGACTTGGGATTTGCATTCTGCCTTCTGTTTGAGGCGGGTTTTTGGTTATCATGATGATGGTGAGCCAGTTGTTCGAGCTTATGTCTGTGAGAATGGCCATGTCTCTGGAGCTTGGACAGATCTGCCATTGTACACTTGA

Protein sequence

MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT*

Homology

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BLAST of CsaV3_4G000750 vs. NCBI nr
Match: XP_011652932.1 (phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypothetical protein Csa_014680 [Cucumis sativus])

HSP 1 Score: 788.1 bits (2034), Expect = 3.4e-224
Identity = 379/379 (100.00%), Postives = 379/379 (100.00%), Query Frame = 0


Query: 1   MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60
           MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL
Sbjct: 1   MQMLKKTTTTTTTPFHFHHHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILL 60

Query: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS 120
           NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS
Sbjct: 61  NIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWAS 120

Query: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180
           LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS
Sbjct: 121 LHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNS 180

Query: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240
           DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV
Sbjct: 181 DLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCV 240

Query: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300
           SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR
Sbjct: 241 SKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFR 300

Query: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360
           GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA
Sbjct: 301 GIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRA 360

Query: 361 YVCENGHVSGAWTDLPLYT 380
           YVCENGHVSGAWTDLPLYT
Sbjct: 361 YVCENGHVSGAWTDLPLYT 379

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BLAST of CsaV3_4G000750 vs. NCBI nr
Match: XP_016901491.1 (PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 679.1 bits (1751), Expect = 2.2e-191
Identity = 326/335 (97.31%), Postives = 329/335 (98.21%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

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BLAST of CsaV3_4G000750 vs. NCBI nr
Match: KAA0044375.1 (phytochrome A-associated F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 676.4 bits (1744), Expect = 1.4e-190
Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA SLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

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BLAST of CsaV3_4G000750 vs. NCBI nr
Match: XP_038905727.1 (phytochrome A-associated F-box protein [Benincasa hispida])

HSP 1 Score: 667.2 bits (1720), Expect = 8.7e-188
Identity = 321/338 (94.97%), Postives = 326/338 (96.45%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLV+
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVA 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKL SS   +
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLCSSHNPE 120

Query: 166 PESNPSSTALFEVNSDL----SASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ 225
           PES+P STALFEVNSDL    SASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ
Sbjct: 121 PESDP-STALFEVNSDLSASASASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQ 180

Query: 226 IGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI 285
           IG TKVEKGVFMTD++FCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI
Sbjct: 181 IGVTKVEKGVFMTDKDFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYI 240

Query: 286 CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSA 345
           CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNR KIDLNCAFCSCKETWDLHSA
Sbjct: 241 CDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRKKIDLNCAFCSCKETWDLHSA 300

Query: 346 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 FCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 337

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BLAST of CsaV3_4G000750 vs. NCBI nr
Match: XP_022155270.1 (phytochrome A-associated F-box protein isoform X1 [Momordica charantia])

HSP 1 Score: 613.2 bits (1580), Expect = 1.5e-171
Identity = 297/374 (79.41%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 13  TPFHFH-------HHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFK 72
           T FHF        H+  L  LS  +   S   P  + +  MA+S FS LP+D+LLNIFFK
Sbjct: 10  TVFHFKPTASPSTHYSNLAPLSLQTLDFSSGCPLISSI--MAESAFSNLPEDVLLNIFFK 69

Query: 73  LEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWASLHKLA 132
           LEDDPRNWARLACVSTKFS T+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLA
Sbjct: 70  LEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLA 129

Query: 133 VCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSAS 192
           VCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQ+ +P+++      F+VNSD SAS
Sbjct: 130 VCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ----FQVNSDFSAS 189

Query: 193 ASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRK 252
           AS     SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFM DREF  SKRRK
Sbjct: 190 AS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRK 249

Query: 253 ICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKN 312
           I RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKN
Sbjct: 250 IYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKN 309

Query: 313 FKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN 372
           FK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN
Sbjct: 310 FKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN 369

Query: 373 GHVSGAWTDLPLYT 380
           GHVSGAWTDLPLYT
Sbjct: 370 GHVSGAWTDLPLYT 372

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BLAST of CsaV3_4G000750 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2)

HSP 1 Score: 435.3 bits (1118), Expect = 7.3e-121
Identity = 218/354 (61.58%), Postives = 257/354 (72.60%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C KT+C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 106 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 165
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 166 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 225
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 226 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 285
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 286 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 345
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 346 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

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BLAST of CsaV3_4G000750 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.2e-06
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 262 SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 321
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 322 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 378
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

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BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL
Match: A0A0A0KWJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 2.4e-199
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 120

Query: 166 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 225
           PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST
Sbjct: 121 PESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGST 180

Query: 226 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 285
           KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP
Sbjct: 181 KVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWP 240

Query: 286 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 345
           GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR
Sbjct: 241 GCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLR 300

Query: 346 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 334

[Close]

BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL
Match: A0A5D3E0Q4 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001020 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 326/335 (97.31%), Postives = 329/335 (98.21%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL
Match: A0A1S4DZU2 (phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 PE=4 SV=1)

HSP 1 Score: 679.1 bits (1751), Expect = 1.1e-191
Identity = 326/335 (97.31%), Postives = 329/335 (98.21%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MADSLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MADSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL
Match: A0A5A7TSM0 (Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G001020 PE=4 SV=1)

HSP 1 Score: 676.4 bits (1744), Expect = 6.9e-191
Identity = 325/335 (97.01%), Postives = 328/335 (97.91%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA SLFSTLP+DILLNIFFKLEDDPRNWARLACVSTKFS TIRNICWKTKCSNAIPSLVS
Sbjct: 1   MAGSLFSTLPEDILLNIFFKLEDDPRNWARLACVSTKFSSTIRNICWKTKCSNAIPSLVS 60

Query: 106 DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQ 165
           DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLG SQ+SQ
Sbjct: 61  DLLVGDSIPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLERELGPDENYMKLGYSQHSQ 120

Query: 166 PESN-PSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 225
           PES+ PSSTALFEVNSDL  SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS
Sbjct: 121 PESDPPSSTALFEVNSDL--SASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGS 180

Query: 226 TKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 285
           TKVEKGVFM DREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW
Sbjct: 181 TKVEKGVFMADREFCVSKRRKICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDW 240

Query: 286 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 345
           PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL
Sbjct: 241 PGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCL 300

Query: 346 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
           RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT
Sbjct: 301 RRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 333

[Close]

BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL
Match: A0A6J1DLZ5 (phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022413 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 7.2e-172
Identity = 297/374 (79.41%), Postives = 322/374 (86.10%), Query Frame = 0


Query: 13  TPFHFH-------HHRPLFSLSSSSSSSSLSLPFSTPLFPMADSLFSTLPDDILLNIFFK 72
           T FHF        H+  L  LS  +   S   P  + +  MA+S FS LP+D+LLNIFFK
Sbjct: 10  TVFHFKPTASPSTHYSNLAPLSLQTLDFSSGCPLISSI--MAESAFSNLPEDVLLNIFFK 69

Query: 73  LEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVSDLLVGDSIPAGGWASLHKLA 132
           LEDDPRNWARLACVSTKFS T+RN+CWKTKCS AIPSL++DL+VGDS+PAGGWASLHKLA
Sbjct: 70  LEDDPRNWARLACVSTKFSSTVRNVCWKTKCSTAIPSLLADLVVGDSVPAGGWASLHKLA 129

Query: 133 VCCPGLVHSGVLLENSDFGLERELGPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSAS 192
           VCCPGL+HSGVLLENSDFGLERELGPDENY++L  SQ+ +P+++      F+VNSD SAS
Sbjct: 130 VCCPGLLHSGVLLENSDFGLERELGPDENYLELAPSQHPKPDTDTQ----FQVNSDFSAS 189

Query: 193 ASASASASDCAWSLYDDLYLDTMYNDSEAPDVLDPQIGSTKVEKGVFMTDREFCVSKRRK 252
           AS     SDCAWSLYDDLYLDT+YNDSEAPDV DPQIG+TKVEKGVFM DREF  SKRRK
Sbjct: 190 AS-----SDCAWSLYDDLYLDTVYNDSEAPDVPDPQIGATKVEKGVFMADREFSASKRRK 249

Query: 253 ICRSMRSHLASGVWNLSREQGNKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKN 312
           I RSMRSHLASGVWNLSREQGNKLLRSRFRGD LYICDWPGCVHIEEKRNYMLFRGIFKN
Sbjct: 250 IYRSMRSHLASGVWNLSREQGNKLLRSRFRGDCLYICDWPGCVHIEEKRNYMLFRGIFKN 309

Query: 313 FKGSHVWRTIKDGNRNKIDLNCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN 372
           FK SHVWRTIKDGNRNKIDLNCAFCSC+ETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN
Sbjct: 310 FKASHVWRTIKDGNRNKIDLNCAFCSCQETWDLHSAFCLRRVFGYHDDGEPVVRAYVCEN 369

Query: 373 GHVSGAWTDLPLYT 380
           GHVSGAWTDLPLYT
Sbjct: 370 GHVSGAWTDLPLYT 372

[Close]

BLAST of CsaV3_4G000750 vs. TAIR 10
Match: AT4G02440.1 (F-box family protein )

HSP 1 Score: 435.3 bits (1118), Expect = 5.2e-122
Identity = 218/354 (61.58%), Postives = 257/354 (72.60%), Query Frame = 0


Query: 46  MADSLFSTLPDDILLNIFFKLEDDPRNWARLACVSTKFSCTIRNICWKTKCSNAIPSLVS 105
           MA+S+FS +P+D++ NIFFKL+DDPRNWARLACV TKFS  +RN+C KT+C +AIP+++S
Sbjct: 1   MAESVFSCIPEDVVFNIFFKLQDDPRNWARLACVCTKFSSIVRNVCCKTQCYSAIPTVIS 60

Query: 106 DLL--------------VGDS--IPAGGWASLHKLAVCCPGLVHSGVLLENSDFGLEREL 165
           DLL                DS   P GGWASL+KLAVCCPGL H+G+LLENSDFGLEREL
Sbjct: 61  DLLPLPPSAAASASSSTAADSSLTPPGGWASLYKLAVCCPGLFHAGILLENSDFGLEREL 120

Query: 166 GPDENYMKLGSSQYSQPESNPSSTALFEVNSDLSASASASASASDCAWSLYDDLYLDTMY 225
           GPD+N            +  P++T L  +N +  +    S   +   WSLYDDLY DT+ 
Sbjct: 121 GPDQNL-----------DPKPTTTDL-ALNDEEVSKPVGSGLETTSFWSLYDDLYTDTI- 180

Query: 226 NDSEAP---DVLDPQIGSTKVEKGVFMTDREFCVSKRRKICRSMRSHLASGVWNLSREQG 285
               AP   D +D Q    ++E       R+  V KRRKICRS+ SHLASG WNLSREQG
Sbjct: 181 ---PAPPPEDSIDDQ--EEEIETSEIRPGRDLPVRKRRKICRSLGSHLASGGWNLSREQG 240

Query: 286 NKLLRSRFRGDSLYICDWPGCVHIEEKRNYMLFRGIFKNFKGSHVWRTIKDGNRNKID-L 345
           NKLL SRFRGD LYIC+WPGC+H+EEKRNYMLFRG+FK+FK S VWRTI DGNR+K   L
Sbjct: 241 NKLLASRFRGDCLYICNWPGCIHVEEKRNYMLFRGVFKDFKRSRVWRTINDGNRSKTSGL 300

Query: 346 NCAFCSCKETWDLHSAFCLRRVFGYHDDGEPVVRAYVCENGHVSGAWTDLPLYT 380
            CAFC C ETWDLHS+FCLRRVFG+HDDGEPVVRAYVCENGHVSGAWT LPLYT
Sbjct: 301 KCAFCLCDETWDLHSSFCLRRVFGFHDDGEPVVRAYVCENGHVSGAWTALPLYT 336

[Close]

BLAST of CsaV3_4G000750 vs. TAIR 10
Match: AT5G15440.1 (EID1-like 1 )

HSP 1 Score: 55.8 bits (133), Expect = 8.5e-08
Identity = 44/126 (34.92%), Postives = 62/126 (49.21%), Query Frame = 0


Query: 262 SREQGNKLLRSRFRGDSLYICDWPGCVHIE--EKRNYMLFRGIFKNFKGSHVWRTI--KD 321
           SR  G  LL  + R D LY+CD   C H++  E+ +  LFRGIFK+F  S V + I  K 
Sbjct: 123 SRTLGRSLLPPQCRTDVLYVCD--PCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKA 182

Query: 322 GNRNKIDLNCAFCSCKETWDLHSA------FCLRRVFGYHDDGEPVVRAYVCENGHVSGA 378
              +  ++ C +C  K  W +  A       C+ R+  Y D     +  +VC NGH+ G 
Sbjct: 183 VPFHPSEV-CPYCKAK-LWSMLQAKIIPQSACI-RLEAYED----CIEYFVCLNGHLLGI 239

The following BLAST results are available for this feature:

BLAST of CsaV3_4G000750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652932.1	3.4e-224	100.00	phytochrome A-associated F-box protein [Cucumis sativus] >KAE8649043.1 hypotheti...	[more]
XP_016901491.1	2.2e-191	97.31	PREDICTED: phytochrome A-associated F-box protein [Cucumis melo] >TYK29502.1 phy...	[more]
KAA0044375.1	1.4e-190	97.01	phytochrome A-associated F-box protein [Cucumis melo var. makuwa]	[more]
XP_038905727.1	8.7e-188	94.97	phytochrome A-associated F-box protein [Benincasa hispida]	[more]
XP_022155270.1	1.5e-171	79.41	phytochrome A-associated F-box protein isoform X1 [Momordica charantia]	[more]

BLAST of CsaV3_4G000750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEA8	7.3e-121	61.58	Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 P...	[more]
Q9LF38	1.2e-06	34.92	EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1	[more]

BLAST of CsaV3_4G000750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWJ3	2.4e-199	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001740 PE=4 SV=1	[more]
A0A5D3E0Q4	1.1e-191	97.31	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S4DZU2	1.1e-191	97.31	phytochrome A-associated F-box protein OS=Cucumis melo OX=3656 GN=LOC103494775 P...	[more]
A0A5A7TSM0	6.9e-191	97.01	Phytochrome A-associated F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1DLZ5	7.2e-172	79.41	phytochrome A-associated F-box protein isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of CsaV3_4G000750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02440.1	5.2e-122	61.58	F-box family protein	[more]
AT5G15440.1	8.5e-08	34.92	EID1-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31348:SF4	PHYTOCHROME A-ASSOCIATED F-BOX PROTEIN	coord: 47..379
IPR040267	F-box protein EID1-like	PANTHER	PTHR31348	EID1-LIKE F-BOX PROTEIN 2-RELATED	coord: 47..379
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 47..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G000750.1	CsaV3_4G000750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding