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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAACAGAACACACAGCCAAAAATCGGTGGGGAAGGTAACGGCGGAGAATCAGAAAGGGGGCAAAACTCGATGTCCGCAAGAACGGGTTAAAGTCTAACAGAAAGAGAAATTGAAAATCAACTGTGAAACTGAGAAGATTGAGGATTTGGAATAATGTTACAGAGTATAGAAGTGGATGATCAATGGCATAGAAATGGAGGAGAAAGAAATCCCACCGCCGTTGTTCTTTGTTTCTCTGTTTCTGTCCGTCGCTCCGTTCAGTTCTGGCTTTCGATTTCCTCTCCACACTCATTTCGCTGCTTCACGCTCCTTTGTAAGCGGGTCGATGTACTCTTCTCCCCTTGTCGGCCCATGA mRNA sequence ATGAAACAGAACACACAGCCAAAAATCGGTGGGGAAGGTAACGGCGGAGAATCAGAAAGGGGGCAAAACTCGATGTCCGCAAGAACGGAAATGGAGGAGAAAGAAATCCCACCGCCGTTGTTCTTTGTTTCTCTGTTTCTGTCCGTCGCTCCGTTCAGTTCTGGCTTTCGATTTCCTCTCCACACTCATTTCGCTGCTTCACGCTCCTTTGTAAGCGGGTCGATGTACTCTTCTCCCCTTGTCGGCCCATGA Coding sequence (CDS) ATGAAACAGAACACACAGCCAAAAATCGGTGGGGAAGGTAACGGCGGAGAATCAGAAAGGGGGCAAAACTCGATGTCCGCAAGAACGGAAATGGAGGAGAAAGAAATCCCACCGCCGTTGTTCTTTGTTTCTCTGTTTCTGTCCGTCGCTCCGTTCAGTTCTGGCTTTCGATTTCCTCTCCACACTCATTTCGCTGCTTCACGCTCCTTTGTAAGCGGGTCGATGTACTCTTCTCCCCTTGTCGGCCCATGA Protein sequence MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPLHTHFAASRSFVSGSMYSSPLVGP*
Homology
BLAST of CsaV3_3G045210 vs. NCBI nr
Match: KGN59965.1 (hypothetical protein Csa_000935 [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL 60
MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL
Sbjct: 1 MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL 60
Query: 61 HTHFAASRSFVSGSMYSSPLVGP 84
HTHFAASRSFVSGSMYSSPLVGP
Sbjct: 61 HTHFAASRSFVSGSMYSSPLVGP 83
BLAST of CsaV3_3G045210 vs. ExPASy TrEMBL
Match: A0A0A0LDA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857060 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL 60
MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL
Sbjct: 1 MKQNTQPKIGGEGNGGESERGQNSMSARTEMEEKEIPPPLFFVSLFLSVAPFSSGFRFPL 60
Query: 61 HTHFAASRSFVSGSMYSSPLVGP 84
HTHFAASRSFVSGSMYSSPLVGP
Sbjct: 61 HTHFAASRSFVSGSMYSSPLVGP 83
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KGN59965.1 | 2.4e-37 | 100.00 | hypothetical protein Csa_000935 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LDA4 | 1.1e-37 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G857060 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..25 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..33 |
Relationships
The following mRNA feature(s) are a part of this gene:
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