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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCATTGTTTCCTTAGAAAACGAACCTCCTCCTCCTTCAAGCTCTTTATGTTTGTGCTTTATGAGCCACGAGCTTTGATCCATCAAGCATTTTCAGCCTTGTGCATAGACAGCGATTTGAACAAAAGCCGTTTTGTGTAAAAGATTGGATTGTTTGGGGTGTGATAGCAATGGACAGAAGAGTTCAGATTCAGCTTGTGGACGCCAAGTTTTCCAGGTACGTTTGATTTTCTGTAGAGATTTTTTTCACGGGCGCCTTCACATCTATGGGAGGCTGGTTATTAGCCCTTAAGACGCCATGTAAAGGTCATCTGTACAAAAATCTTTGATGTCGTTTTTTCAACTCGAGATTTATGGGCGGCAGTAGATTTCTCCAGCTCTAACTTTCTTTTATTACTTTAACAGATTTCACTGGTTTTCCAGTTGCAACCAGCAGAACTTTTCAGATGA mRNA sequence ATGGCCATTGTTTCCTTAGAAAACGAACCTCCTCCTCCTTCAAGCTCTTTATGTTTCAATGGACAGAAGAGTTCAGATTCAGCTTGTGGACGCCAAGTTTTCCAGATTTCACTGGTTTTCCAGTTGCAACCAGCAGAACTTTTCAGATGA Coding sequence (CDS) ATGGCCATTGTTTCCTTAGAAAACGAACCTCCTCCTCCTTCAAGCTCTTTATGTTTCAATGGACAGAAGAGTTCAGATTCAGCTTGTGGACGCCAAGTTTTCCAGATTTCACTGGTTTTCCAGTTGCAACCAGCAGAACTTTTCAGATGA Protein sequence MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR*
Homology
BLAST of CsaV3_3G045100 vs. NCBI nr
Match: KGN59954.1 (hypothetical protein Csa_002075 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 1.9e-18 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 1 MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR 50
MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR
Sbjct: 1 MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR 49
BLAST of CsaV3_3G045100 vs. ExPASy TrEMBL
Match: A0A0A0LG34 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855970 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 9.3e-19 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query: 1 MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR 50
MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR
Sbjct: 1 MAIVSLENEPPPPSSSLCFNGQKSSDSACGRQVFQISLVFQLQPAELFR 49
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN59954.1 | 1.9e-18 | 100.00 | hypothetical protein Csa_002075 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LG34 | 9.3e-19 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G855970 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..25 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 9..25 |
Relationships
The following mRNA feature(s) are a part of this gene:
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