CsaV3_3G041790 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G041790
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 34067574 .. 34067770 (-)
RNA-Seq ExpressionCsaV3_3G041790
SyntenyCsaV3_3G041790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCAATTACTTGTATGCCCCCAATCTTTGTTGGAGCTGTTCGTATAAAGCTTCTGTTGCCCGTTCTTAAGCTCCACCGCCTTGCCTTTCTCGATTATGTAATTAATAAAAGAGGCAAGAATAACGTCTCTGTTCCGGTGAGGTAGTAGAATCGTTTCTCATAAGCAAAGGAGAAGACAACATAGTGAAATAG

mRNA sequence

ATGCCTCCAATTACTTGTATGCCCCCAATCTTTGTTGGAGCTGTTCGTATAAAGCTTCTGTTGCCCGTTCTTAAGCTCCACCGCCTTGCCTTTCTCGATTATGTAATTAATAAAAGAGGCAAGAATAACGTCTCTGTTCCGGTGAGGTAG

Coding sequence (CDS)

ATGCCTCCAATTACTTGTATGCCCCCAATCTTTGTTGGAGCTGTTCGTATAAAGCTTCTGTTGCCCGTTCTTAAGCTCCACCGCCTTGCCTTTCTCGATTATGTAATTAATAAAAGAGGCAAGAATAACGTCTCTGTTCCGGTGAGGTAG

Protein sequence

MPPITCMPPIFVGAVRIKLLLPVLKLHRLAFLDYVINKRGKNNVSVPVR*
Homology
[Close]
BLAST of CsaV3_3G041790 vs. NCBI nr
Match: KAE8651229.1 (hypothetical protein Csa_023513 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 5.6e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MPPITCMPPIFVGAVRIKLLLPVLKLHRLAFLDYVINKRGKNNVSVPVR 50
          MPPITCMPPIFVGAVRIKLLLPVLKLHRLAFLDYVINKRGKNNVSVPVR
Sbjct: 1  MPPITCMPPIFVGAVRIKLLLPVLKLHRLAFLDYVINKRGKNNVSVPVR 49

The following BLAST results are available for this feature:
BLAST of CsaV3_3G041790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651229.15.6e-18100.00hypothetical protein Csa_023513 [Cucumis sativus][more]
BLAST of CsaV3_3G041790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G041790 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G041790 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G041790.1CsaV3_3G041790.1mRNA