CsaV3_3G041690 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G041690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	FACT complex subunit SSRP1
Location	chr3: 34005245 .. 34014351 (+)
RNA-Seq Expression	CsaV3_3G041690
Synteny	CsaV3_3G041690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGTAAAGTAAATGAATGAATTAAATTATGGTGACGGATGTGATCCAACGAGGGCTAAGCTAAGGCTAACGTGAATGTTAAAAAAGAAGAAAAAAAGGTTTAGAATGAGTCGGCGAACAGGGGATCACCACCGCTTGGCGCCACGACAGTGGGAAGGACTCCCCTTTCATTTCATTCTCAAAACCATTTAAAACCCTTTCTTTTCCCTTTTCTTTTTTTTGCGATTCCTTTTCTTCTCGTCGCTCTCAGGTTTCCGGCTATGGCTGACGGTCAGCTCTACAACAACATCTCTCTCGGCGGCCGTGGAGGCACTGTGAGCTCTCTCTCTCTCTTTCTGCCGCTGCTAACTTACTAGGTTTCTTGGTCGAGTTGGATCCTTGTATTTAGTATGGCCATGGCGATTCCCTTGTGTTTTCAAACCCTAGCTTTTTAACTCCTCCGAAATTCCATATGAACTTACAATGTGGTATACGGCGCTTCTGTGCCTTTCCGTACCTCTTCCTGGCTCTGCGGAAGGGAGGCGGTGTCAATTACCCAGAATAATTAGTGATTTTCCAGGAATTGGAGCTTTTTCCACATCGCGTTATTCTTCTTTGTAAATTTGTTTGGGGATGGGATGTACTTAAAGTTCCCAAATTTCATAAATTTGATTGGTTGTTATTGTTTCCGAGCGTCGTCTGTGGGGAGCATGGGGGTTAAGGGTTATTATATTTCGGGCTCTTTAACTTTTTATCGTTGGCAGGAGGATACTCAACTTGAATAAAGGAAAGGAAATGATCTTTAATTGTTACATTTTTTTTTTTTTGGGCTTTTGTGGGCTGCTGTTAAAGTTTGGAATGATAAAACATAGGTAATTCTCCTTCATGCATTATGTTTCAATGCAGAACCCTGGCCAGCTTAAAACAGATCAAAGAGGTATTCAATGGAAGAAGCAAGGAGGCGGCAAGGCAATTGAGGTGGATAAAGCAGACATTGTTGGTGTGACATGGATGAAGGTCCCAAGGTCGAACCAGTTGGGAATTCGGGTCAAAGATGGGTTGTACTACAAGTTCATTGGATTCCGCGACCAGGTTTCTTGAATTTTTTTAGAATGATGTTGCTTTTATTTTTATTGATTGACTTTATTATGTTAATTTCTCATCTATTTTTTGTAGTTGTAATTGGCTAAATCATTTCATTTAGTTAGTGAATAGCTTTTTATGTTTGGTCCATCTCACCCGATCACAACAGTAGCTCGAAATGAGACGATTGCAAATTAATATTTGAAGAGTGTATATCTTCTATGATGTGGTTGAAATGTTCTGATTGTGCGTTTTTTTTTTTCGGGGTAAATGTAGGACATCAGCAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAGCACCAGAGGAAAAACAGCTTTCTGTTAGTGGTCGTAATTGGGGTGAAGTTGATCTGAATGGTAAGCTGTTTTGATGCATTTAGTCTATCACTTGTTGTGTTTGTCGTGTTTTACTTGTCAATATCAATGTTATATCCTAATAACTCTTACTTTATTGCAACATTGCACGTATAAGATTGCAACTTTAGTTATCTAAGAAGAGACTAGCTGGCTCTTAAAAATCACCAGTCTTGGTTTAGGAATTACACCATATTGACATTTAGATCTAACATACGATTACTTTTCCTTAATTTTCTGTGTTTCTAGCCTGAGCTATTCAAATATAAAAGTCATCTCTGTGCAAATTTATTTTTTTGAGGTTAATCTATTCTCTTAAAAGAGACTGCACTGGCATGTGCAATCAAAATTTCATTTATTATTTTGTAAGATTACCAAGCATTTTGTTCTTTAACTATTCCCCCCTTCACCCTCTCTTTTCTATATACCTCTCTTCGATACAATCCTTCTTAAATTTTTTTAGCAATGTAATCATGTCTATAGGAAAGGTGTCTTCATTTAATTATTTTTATTTTTATTTTTGCAGGGAATATGCTTACTTTCTTGGTTGGTTCGAAGCAAGCATTTGAAGTGTCTCTAGCTGATGTAGCCCAAACACAACTTCAAGGGAAGAACGATGTTATGTTGGAGTTCCATGTAGATGATACAACAGGAGCTAATGAGGTCATTCATTTTGTTCTCTCTTTCTTTTAGTTGCTTACCAATTGATGAGCAACATAACACCTAATATCTCGAACTGCAATGCTTTTGTTTTGATCACTTTCTTGTAATATAATATTTAAACATTACGATCACAGAAAGATTCACTGATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCGCCCTCCTGCTCAGGTAGGATCATTTATCTACTTGATTCAAACTATGATGCATATCTTTTTTTGTGACTTTTTATCAAGTATAGTTTGATTTAGGTTTTCCGTGACAAAATTATGTCTATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTTACATTTGAGGGTATTGCTATCCTCACTCCAAGGTAGACATCTGAATGTACACGTTTCTGTTTGATTTATTTAGCTTGCATAGTTCTTTTTGTTTTTTTAATGGTGCCTACATTTTTCTTTCTTTCTTAAGGTATTCTAAAGAGGTGGTTTTTGTTGTATAGGGGTCGGTACAGTGTAGAACTCCACCTTTCATTCCTGCGCCTTCAAGGACAAGCCAATGACTTTAAAATACAATACAGTAGCGTTGTTCGCCTTTTCTTACTTCCAAAGGTTTTTTTCTTGACTTCTATTGAACATAGATGTTACACTATCTAAACCAGTTAGTAATAAGATTTGAAGTCTCAAGTGCTTTTGATATTTTGTGCAGTCCAATCAGCCACATACTTTTGTGGTTGTAACTTTAGATCCACCGATTCGTAAAGGCCAAACTTTATACCCTCATATTGTTCTGCAGGTATTTGTCACTTCATTTTTTAACATTTCATTTAACCTTTTTTTTTTCTCTTGATGAATTCTCGTCATTTACTTCGTAGGATCACCTTTTCTTTTGATGCATCTTTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACGCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGTAGAAGCGTGATTCTCCCTCCAATCAATGGACTTGTTTTTTTTTTTTTGGAATATCAATGGACTTGTTTTACTCCAATGGAAAAGAAACGAAAGTATAGACATAACACTTGCACAGACAAAATGGGATACTGTTTTTTAAAAATCTAGGATCACAATTTTACTAGATACGTTATTTGAATATGTATTTTGTTTTTCTTATCATAAAGACAATTTAAAGTTGATGAGCCATGTACATTTGAAAATATATTCATCAATACCTAGCAAGGTGTTTAATTTAAAGATGTTTAATTATCATACAAGACGGAATTCTTTTTTTTTTTTTTCATTGGTTGCAAATTGATTATGTTGAACATGTGCTTTGGCATACGTTCTATGAGTTCATTGATCACGTTCATCAATACCTAGCAAGGTGTTTAATTATAGACTTCTCTTGTGAATTTCATATTTCTCTCAGTAAATAGTTGTGTTGATAACAGGGGCTTATTCATGAAGTGTTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGGAAATTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAAAAAAGTTTCTTCTTTCTTCCCAAGCCTCCTACCCTTATTCTTCATGAGGAGGTATAGATTCAATATTGGATCTTGCATATTCCAACATTATTTGATGTTTCAATGTTCTATCCATTGAGTTCCTTACCTTAAAATCTTTTTGCAATAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCAAATATGCATTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGCGCAATGAATACCATAATCTTTTCGACTTTATAAGGTCAGTCTAATTTCTTACTTCACATGTATGGAGGTGGCTTTTATTTCATCTTATTTTATTTGTTCATCCCTGCAGTGGGAAGGGTTTGAAGATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGCGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGACCCGCATCTTGAGCGCATTAGAAATGAAGCTGGTGGAGATGAGAGTGATGAAGAGGTAAGCTTTTACCTGTTTAGGACTGCCAATTAGGGTTCTTTTTTTTATGGTGGTAAACAGTTTTGGCCTACTGTGCATTTTATTTAAGACTAGGAAGCATTGGGATGTTTACTTTACTGGGTTAATGTCAAGTGATGGTAGTTAGTTGGGGCAGTATTTTGGCTGAAGTAGCTGTTGAGACCAAGTTGGTTAGCATGTTTCCAGGTTCTAATATTGCTAGTTGGGGTTAAGGAGATTACTAGAAAGGTTTATGTAGGAATTGTAATGGGGGAGGCTTTTGCTTCTCGTGCTCAACCAGATTTCAGTTAATTACTTGTCCTGGGCTTGTTTGTTGGGTTAAAACTATCGATGGCTTCATGGATACATACCATCATAACTGAGAATTTCAGAATGTGATTGATGATATGGAGTACGATATCAGAAAAATAGTGGGAATATCATTAGGAATACTAGCCGTGACATGTTTGTATAGAAGATGGTTTGTGTTTGACAGTTGCGAATAAAGTCTTGAAAGTGCGACTTCCACCAAACTTCTTTGCAATTATGGGTTAATACATAGAACTAGCGTGAATTCAACACCCACTTGAAGGAATGGATAGGTGATGGAAAGGGCTTGTTATGTGAATCAGACTCCCACTAATAGTTATTTGTAGTCATGGGAAAGGATGAATAGGGAAGGCATGAATAGTTTAGGGACATAGTCAATTTGTCTTGAGTGTTCTGTCATCTGAAGGAGCGATTTTGGTACTTTCCAGTGGACCATCAGCAACTAGTAATACAGTCATATCAGATATTTATTGTTTATTCATGACACATGGTACTTTTGGATGCCTCTGGTTGTGTTTGGTGGTTAGTTTATAATACTTGTGCCTCTGAAGTTCTAGTGTTGCAAACTGGTTAAATGGCCTTTTACTTGGTTGGATTTTGGAAATTTTGGAAAATCTTTACATCAAAACTTTTACACGATTGCCCAATACTTTGTGGTCAATAAAGAATATTGAAATGATATGAGGTATATGAGGCTCAGTACAGTCTATAAACGTATTGAGAGTCATGGGTACATGTGAATATCCATTTAAATGCATATGTCACTTGTTGGCTTCTCAAAAAAAAAAAAATTTTTTTACTCGTTAATAGATTTACCATTGATTACCTTGTATGCAACATAATTTGCGAATTATTTTGTTGTCTATTTTGTATTGCAACTTTTGCCTATAGTTTATAAATACCTGATAGCTGCATCCTGGCATGTATTCAACGGACAATAGGTAGTACTAATGCTGAAGCTAACAAACTTTTTCTGAATTTGCAGCATATATGCATATCATTGTGTTTGAATGAACTTATGTGCGTATATCTTTATATTTGCCTTTTTGATGTTCATGTTCATGTCCAGATCCATATAATTTGGTTGTGTTGTTGTAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATGACTCTGACGGTAGTGCAAGTGGAGGTGAAAAAGAGGTCAGCAATTTTTTTAAAAAAAACCCTTGAGTTGAAAATATGCTTTGCATTCTATATTGTAGCTCACTGAGCTTCCATTTTCAGAAGCCTGGAAAAAAGGAGGCCAAAAAGGACCCTTCGGCTTCCAAGGCACCTGCCAAGAAGAAATCTAGAGAAGGGGCTGACGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAGAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGGTTATTTACTCGAGAAACCTTCCCCTCCCCAACTGTTGTAGGGTATTTGCCATCGTAGGATTATTTTGATAGTTTGCTTACCTGTATTTTCTCATTGCAGAACATAAAGAAAAGTAATCCTGGAATTTCTTTCACGGAGTTAGGGCGAGTACTTGGAGACAAGTGGAATAAGATGTCGGGTATGTGGCTTTTTAAAATTTTAATTGGATATCTTGCATCAAAGATTCCTATGTTAGCGTAAGCTAAGAAGCACTTGTATTTTATCTGAGCCTTGATTAATGTAATTGCAGCGGAAGAGAAAGAACCATATGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAAGAAATTAGTGGATATAAGAATCCACAGCCAATGAATATAGACTCTGGGAATGAATCTGACAGTGCTTAGATGATCGGATCAAATTCTTGTTCTATTTGGATGCAACTTTATGGGTGAATGGCATATTTACATGTACTAGGTTGTTGTACCGTTCTGTATTATTAGCATAACATAGCCTAGTTCAGTTCAGTATTAGGCTGAGGAATCTCAAATGTTGAGCAAGTAGAGGTGCTAGTTATGGCTTCTATGTATGCTTTCTTTTTTGAAGCAACTGAAAGAGAGATTGAACAGCCTAACTTGCTGGCTATAAGCTGACACAACCTGGTAAATATTTAGAATCAACCTTCACATTGAGTAGATTCTTTTTTATTTCCTCTGTTTCTCCACTTGTAGCTGCAACTCTTTTTTAAAAGAGAGAAAAAAAAAAACAGTAGACAAGGTAGAAGAAAATGTCACAATTGCCTAGGGGTGTTCAAAAAACTCGATAATCCGACAAACTTGGACTACCCAATCCAAATCGAGGTTGGGTTTGGATTAAATAATTTTTTGAGTTGGGTTGGGTTAAAGAATTGAAAAAATATAAAAATTGGTCGGGTTGGGGGATTAAGGACTGGGTTGACCCAATCCAACCCAGTTTATTTATATATATAAACCCTATCCAACCCGGTTTATTTATATATATAAACCCTAAATAACATCCTAATTTTTCTTTCCCATCTCACGGCTTACACTTAACCCCTTCCACTTTAGACCTCACGACTTACACTCAACCCCTTCCCCTCCATGTTCACGTCACATTTCGGTGAAATGTGACTCACATTCCGAATTTGCCCCACCCAACATGATCCTCACTTTTCCCTTCTTCAACGGCTACGCAGGCCAAAACTGAAACCCATTCTCTCAAACTATCTCACTTTTTCCTTCTTTCCCACTTTTCCAATCATCTATCTCACTAACCTCATTCTCCTTTTTGTTTCTTCCTTCTTGGTCGCTTTCCATTCTACAAGTTAGTCCATCTCTCTCCTTTCACTTTTTCATATTTTTTATTCATCAATTTTGTATATGGTATCTCTTTTTTCCCTGAAATCACATTTCTAGCTACCAATTTTGTTGGGTTTGTCTCTTTTTTGGCAATGTGTGAGGTGAATCTTTTGTTGCATGTGTCTTTTTCTTTTGTTTTACTGCCTACTATCTTTTTCTTCTTTTTTCAATTTCCTTTGGTTTGATACCCGAGGCTAATTGTTTTAGTTTCCATTACACTGCCTAAACCCTAATAAACTATGGAGTGATGAAAAATAATACTGACCTACCAATCCAATTAGGCTCAACCCAAAAATTTTGAGTTGGGTTGGGTTGACCCACATATTGAACCGATATGGTTCATTTTTCTATAACTCGGATGATTTGGGTTGATCCATACTTACCTCTAACCCGGCTCATGTACACCCCTAATTTTTTCAATTCCCATTAACTAACTATTGGTATTACATTTCAATTTCTACCCTTCCCGACATAACCATCAACCATTGAGGACCTTCCAACGCTCTTTGAGTAAAAATAAACGAATTGTTCTCCATTTAGAAATAAAAGAATTGGCATTGAATTCTGTCCCAAGGATTCTCGAGTTTTCAACATGGTGCTTCTAAGAGAACCTATATCTAGTTCAGATGAGTCGATGTTTTGAAGAAACCCCAAAGCTTCTGTTCTTTCCACAAAATTCATTTAAAGTTGTCTATCGAGATACTACTAAGTAGGAAAAAGTAACTAACGTAACAAGACGT

mRNA sequence

ATGGCTGACGGTCAGCTCTACAACAACATCTCTCTCGGCGGCCGTGGAGGCACTAACCCTGGCCAGCTTAAAACAGATCAAAGAGGTATTCAATGGAAGAAGCAAGGAGGCGGCAAGGCAATTGAGGTGGATAAAGCAGACATTGTTGGTGTGACATGGATGAAGGTCCCAAGGTCGAACCAGTTGGGAATTCGGGTCAAAGATGGGTTGTACTACAAGTTCATTGGATTCCGCGACCAGGACATCAGCAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAGCACCAGAGGAAAAACAGCTTTCTGTTAGTGGTCGTAATTGGGGTGAAGTTGATCTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCGAAGCAAGCATTTGAAGTGTCTCTAGCTGATGTAGCCCAAACACAACTTCAAGGGAAGAACGATGTTATGTTGGAGTTCCATGTAGATGATACAACAGGAGCTAATGAGAAAGATTCACTGATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCGCCCTCCTGCTCAGGTTTTCCGTGACAAAATTATGTCTATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTTACATTTGAGGGTATTGCTATCCTCACTCCAAGGGGTCGGTACAGTGTAGAACTCCACCTTTCATTCCTGCGCCTTCAAGGACAAGCCAATGACTTTAAAATACAATACAGTAGCGTTGTTCGCCTTTTCTTACTTCCAAAGTCCAATCAGCCACATACTTTTGTGGTTGTAACTTTAGATCCACCGATTCGTAAAGGCCAAACTTTATACCCTCATATTGTTCTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACGCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGGGCTTATTCATGAAGTGTTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGGAAATTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAAAAAAGTTTCTTCTTTCTTCCCAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCAAATATGCATTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGCGCAATGAATACCATAATCTTTTCGACTTTATAAGTGGGAAGGGTTTGAAGATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGCGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGACCCGCATCTTGAGCGCATTAGAAATGAAGCTGGTGGAGATGAGAGTGATGAAGAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATGACTCTGACGGTAGTGCAAGTGGAGGTGAAAAAGAGAAGCCTGGAAAAAAGGAGGCCAAAAAGGACCCTTCGGCTTCCAAGGCACCTGCCAAGAAGAAATCTAGAGAAGGGGCTGACGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAGAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAACATAAAGAAAAGTAATCCTGGAATTTCTTTCACGGAGTTAGGGCGAGTACTTGGAGACAAGTGGAATAAGATGTCGGCGGAAGAGAAAGAACCATATGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAAGAAATTAGTGGATATAAGAATCCACAGCCAATGAATATAGACTCTGGGAATGAATCTGACAGTGCTTAG

Coding sequence (CDS)

ATGGCTGACGGTCAGCTCTACAACAACATCTCTCTCGGCGGCCGTGGAGGCACTAACCCTGGCCAGCTTAAAACAGATCAAAGAGGTATTCAATGGAAGAAGCAAGGAGGCGGCAAGGCAATTGAGGTGGATAAAGCAGACATTGTTGGTGTGACATGGATGAAGGTCCCAAGGTCGAACCAGTTGGGAATTCGGGTCAAAGATGGGTTGTACTACAAGTTCATTGGATTCCGCGACCAGGACATCAGCAGTTTAACCAAATTTTTCCAGAGTAATTGTGGAATAGCACCAGAGGAAAAACAGCTTTCTGTTAGTGGTCGTAATTGGGGTGAAGTTGATCTGAATGGGAATATGCTTACTTTCTTGGTTGGTTCGAAGCAAGCATTTGAAGTGTCTCTAGCTGATGTAGCCCAAACACAACTTCAAGGGAAGAACGATGTTATGTTGGAGTTCCATGTAGATGATACAACAGGAGCTAATGAGAAAGATTCACTGATGGAGATAAGTTTTCACATACCAAATACCAATACTCAATTTGTTGGTGATGAAAGTCGCCCTCCTGCTCAGGTTTTCCGTGACAAAATTATGTCTATGGCGGATGTTAGTGCGGGCATTGAGGAAGCTGTGGTTACATTTGAGGGTATTGCTATCCTCACTCCAAGGGGTCGGTACAGTGTAGAACTCCACCTTTCATTCCTGCGCCTTCAAGGACAAGCCAATGACTTTAAAATACAATACAGTAGCGTTGTTCGCCTTTTCTTACTTCCAAAGTCCAATCAGCCACATACTTTTGTGGTTGTAACTTTAGATCCACCGATTCGTAAAGGCCAAACTTTATACCCTCATATTGTTCTGCAGTTTGAGACTGACTATGTGGTTCAAAGCACGCTGCAAATAGGCGATGAACTTTTCAACACAAAGTACAAGGACAAGTTAGAACCTTCTTATAAGGGGCTTATTCATGAAGTGTTTACCACCATATTGCGTGGTTTATCTGGTGCGAAAATTACCAGACCTGGGAAATTCCGCAGCTGTCAAGATGGTTATGCTGTCAAGTCATCTTTGAAAGCTGAAGATGGTGTCTTATATCCACTTGAAAAAAGTTTCTTCTTTCTTCCCAAGCCTCCTACCCTTATTCTTCATGAGGAGATTGACTATGTTGAATTTGAGAGGCATGCTGCTGGTGGGTCAAATATGCATTACTTTGATCTTCTCATTAGACTGAAAACTGAACAAGAACATCTCTTTAGAAATATCCAGCGCAATGAATACCATAATCTTTTCGACTTTATAAGTGGGAAGGGTTTGAAGATCATGAACTTGGGAGATGCTCAGGCTAGAGATGGCGTGGCAGCTGTTCTCCAAGAGGATGATGATGATGCTGTTGACCCGCATCTTGAGCGCATTAGAAATGAAGCTGGTGGAGATGAGAGTGATGAAGAGGATTCAGATTTTGTTGCTGACAAGGATGATGGGGGTTCTCCAACTGATGATTCAGGTGGGGATGACTCTGACGGTAGTGCAAGTGGAGGTGAAAAAGAGAAGCCTGGAAAAAAGGAGGCCAAAAAGGACCCTTCGGCTTCCAAGGCACCTGCCAAGAAGAAATCTAGAGAAGGGGCTGACGATGGTTCAAAGAAGAAAAAGCAGAAAAAGAAGAAGGATCCAAATGCACCAAAGAGGGCAATATCTGGTTTCATGTTCTTCTCTAAGATGGAAAGAGAGAACATAAAGAAAAGTAATCCTGGAATTTCTTTCACGGAGTTAGGGCGAGTACTTGGAGACAAGTGGAATAAGATGTCGGCGGAAGAGAAAGAACCATATGAATCAAAGGCTCGGGATGACAAAAAACGATACAAGGAAGAAATTAGTGGATATAAGAATCCACAGCCAATGAATATAGACTCTGGGAATGAATCTGACAGTGCTTAG

Protein sequence

MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSNQLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLTFLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFVGDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQANDFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIGDELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDEEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA*

Homology

[Close]

BLAST of CsaV3_3G041690 vs. NCBI nr
Match: XP_004147459.1 (FACT complex subunit SSRP1 [Cucumis sativus] >KGN59592.1 hypothetical protein Csa_002635 [Cucumis sativus])

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. NCBI nr
Match: XP_008443431.1 (PREDICTED: FACT complex subunit SSRP1 [Cucumis melo])

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 639/642 (99.53%), Postives = 640/642 (99.69%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDISSLTK+FQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNTQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. NCBI nr
Match: XP_038905836.1 (FACT complex subunit SSRP1 [Benincasa hispida])

HSP 1 Score: 1239.2 bits (3205), Expect = 0.0e+00
Identity = 634/642 (98.75%), Postives = 636/642 (99.07%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTD RGIQWKKQGGGKA+EVDKADIVGVTWMKVPRSN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDPRGIQWKKQGGGKAVEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGI PEEKQL VSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGITPEEKQLCVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGDDSDGS SGGEKEKPGKKEAKKDPS+SKAPAKKKSREG 
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSISGGEKEKPGKKEAKKDPSSSKAPAKKKSREGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. NCBI nr
Match: XP_022153521.1 (FACT complex subunit SSRP1 [Momordica charantia])

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 623/642 (97.04%), Postives = 634/642 (98.75%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDK+DIV VTWMKVPR+N
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKSDIVSVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDI+SLTKFFQSNCGI PEEKQ+SVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDITSLTKFFQSNCGIVPEEKQISVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ PPAQVFRDKIMSMADV+AGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENCPPAQVFRDKIMSMADVNAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           ED DFV DKDDGGSPTDDSGGDDSD S SGGEKEKPGKKE KKDPSASKAPAKKKSR+GA
Sbjct: 481 EDEDFVLDKDDGGSPTDDSGGDDSDASESGGEKEKPGKKETKKDPSASKAPAKKKSRDGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           +DGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 EDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYE+KARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYEAKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. NCBI nr
Match: KAG6580976.1 (FACT complex subunit SSRP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 624/642 (97.20%), Postives = 631/642 (98.29%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKA+E+DKADIVGVTWMKVPR+N
Sbjct: 50  MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 109

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 110 QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 169

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 170 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 229

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 230 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 289

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 290 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 349

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 350 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 409

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 410 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 469

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG DESDE
Sbjct: 470 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 529

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGD SDGS SGGEKEKPGKKEAKKDPSASK PAKKK +EG 
Sbjct: 530 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 589

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 590 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 649

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 650 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 691

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot
Match: O04235 (FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 1041.2 bits (2691), Expect = 4.9e-303
Identity = 527/643 (81.96%), Postives = 583/643 (90.67%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           M DG L+NNI+LG RGGTNPGQ+K    GI WK+QGGGK I+VDK DI+GVTWMKVP++N
Sbjct: 1   MTDGHLFNNITLGXRGGTNPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGVTWMKVPKTN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+++KDGL YKF GFRDQD+ SLT FFQ+  GI  EEKQLSV+GRNWGEVDLNGNML 
Sbjct: 61  QLGVQIKDGLLYKFTGFRDQDVVSLTNFFQNTFGITVEEKQLSVTGRNWGEVDLNGNMLA 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSLADV+QT LQGKNDV+LEFHVDDTTGANEKDSLME+SFHIP++NTQFV
Sbjct: 121 FMVGSKQAFEVSLADVSQTNLQGKNDVILEFHVDDTTGANEKDSLMEMSFHIPSSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+RP AQVFRDKIMSMADV  G E+AVVTF+GIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENRPSAQVFRDKIMSMADVGVGGEDAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFV+++LDPPIRKGQTLYPHIV+QFETD VV S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVIISLDPPIRKGQTLYPHIVMQFETDTVVDSELAIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           ++L+N+KYKDKLE SYKGLIHEVFTT+LRGLSG K+T+PG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLYNSKYKDKLELSYKGLIHEVFTTVLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           +LYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLK+EQEHLFRNIQ
Sbjct: 361 ILYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDA-QARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESD 480
           RNEYHNL+ FIS KGLKIMN+ DA QA  GVA VL+ DDDDAVDPHLERIRNEAGGDESD
Sbjct: 421 RNEYHNLYGFISSKGLKIMNIADAQQAVGGVAKVLENDDDDAVDPHLERIRNEAGGDESD 480

Query: 481 EEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREG 540
           EEDSDFV DKDDGGSPTDDSG D SD S SGGE EKP KKE KKD S+  + +KKKS++ 
Sbjct: 481 EEDSDFVIDKDDGGSPTDDSGADVSDASQSGGETEKPAKKEPKKDLSSKASSSKKKSKDA 540

Query: 541 ADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKM 600
             DG  KKKQKKKKDPNAPKRA+SGFMFFS+MEREN+KK+NPGISFT++GRVLG+KW  +
Sbjct: 541 DVDG-VKKKQKKKKDPNAPKRALSGFMFFSQMERENLKKTNPGISFTDVGRVLGEKWKNL 600

Query: 601 SAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           SAEEKEPYE+KA+ DKKRYK+EISGYKNPQPMN+DSGNESDSA
Sbjct: 601 SAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot
Match: Q39601 (FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1)

HSP 1 Score: 1007.7 bits (2604), Expect = 6.0e-293
Identity = 520/642 (81.00%), Postives = 568/642 (88.47%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADG L+NNI+LGGRGGTNPGQL+    GI WKKQGG KA+EVDK+D+VG+TWMKVPRSN
Sbjct: 1   MADGHLFNNITLGGRGGTNPGQLRVHSGGILWKKQGGAKAVEVDKSDMVGLTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R+KDGL+YKF GFRDQD++SLT + QS CGI PEEKQLSVSG+NWGEVDLNGNMLT
Sbjct: 61  QLGVRIKDGLFYKFTGFRDQDVASLTSYLQSTCGITPEEKQLSVSGKNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEF          K+SLMEISFH+PN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFMWMILLEQMRKNSLMEISFHVPNSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+RPPAQVFRDKIMSMADV AG E+AVVTFEGIAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPAQVFRDKIMSMADVGAGGEDAVVTFEGIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVV S+L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVDSSLSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           ++L +TKYKDKLEP+YKGLIHEVFT ILRGLSGAK+TRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 EDLLSTKYKDKLEPTYKGLIHEVFTMILRGLSGAKVTRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFIS KGLKIMNLG  +A D + AVLQEDDDDAVDPHLERI+NEAGGDESDE
Sbjct: 421 RNEYHNLFDFISSKGLKIMNLGADKAADAITAVLQEDDDDAVDPHLERIKNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           ED DFVAD DD GSPTDDSG  +SDGS SG E E P KK+ KK+ SA K P  +K + G 
Sbjct: 481 EDEDFVADIDDEGSPTDDSGEGESDGSDSGNE-EIPTKKKPKKEASAPKVPLSRK-KVGD 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DD  KKKKQKKKKDPNAPK +IS FMFFS+ EREN+KK NPGI+FT++G+VLGD+ NK  
Sbjct: 541 DDNMKKKKQKKKKDPNAPK-SISAFMFFSQTERENVKKDNPGIAFTDVGKVLGDRCNKCQ 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
             +K   + +   DKKRY +EIS YKNPQPMN+DSGN+SDSA
Sbjct: 601 LRKKHLLKQRLVADKKRYTDEISNYKNPQPMNVDSGNDSDSA 639

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot
Match: Q05153 (FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2)

HSP 1 Score: 988.8 bits (2555), Expect = 2.9e-287
Identity = 512/646 (79.26%), Postives = 572/646 (88.54%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADG  +NNISL GRGG NPG LK +  GIQWKKQGGGKA+EVD++DIV V+W KV +SN
Sbjct: 1   MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG++ KDGLYYKF+GFRDQD+ SL+ FFQS+ G  P+EKQLSVSGRNWGEVDL+GN LT
Sbjct: 61  QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADV+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+RPP+QVF D I++MADVS G+E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTK+KDKLE SYKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDG
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQ
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVL-QEDDDDAVDPHLERIRNEAGGDESD 480
           RNEYHNL+ FIS KGLKIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESD
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESD 480

Query: 481 EEDSDFV-ADKDDGGSPTDDSGGDDSDGSASG-GE-KEKPGKKEAKKDPSASKAPAKKKS 540
           EED DFV  + DDGGSPTDDSGGDDSD S  G GE KEK  KKE KK+ S+SK    K+ 
Sbjct: 481 EEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRK 540

Query: 541 REGADDG-SKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDK 600
              AD+G SK+KK KKKKDPNAPKRA+SGFMFFS+MER+NIKK +PGI+F E+G+VLGDK
Sbjct: 541 TVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK 600

Query: 601 WNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDS 642
           W +MSA++KEPYE+KA+ DK+RYK+EIS YKNPQPMN+DSGN+SDS
Sbjct: 601 WRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot
Match: Q9LGR0 (FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A PE=2 SV=1)

HSP 1 Score: 905.2 bits (2338), Expect = 4.2e-262
Identity = 460/646 (71.21%), Postives = 545/646 (84.37%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           M DG L+NNI LGGR G+NPGQ K    G+ WK+QGGGK IE++K+D+  VTWMKVPR+ 
Sbjct: 1   MTDGHLFNNILLGGRAGSNPGQFKVYSGGLAWKRQGGGKTIEIEKSDLTSVTWMKVPRAY 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R KDGL+YKFIGFR+QD+SSLT F Q N G++P+EKQLSVSG+NWG +D+NGNMLT
Sbjct: 61  QLGVRTKDGLFYKFIGFREQDVSSLTNFMQKNMGLSPDEKQLSVSGQNWGGIDINGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSLADV+QTQ+QGK DV+LEFHVDDTTG NEKDSLM++SFH+P +NTQF+
Sbjct: 121 FMVGSKQAFEVSLADVSQTQMQGKTDVLLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFL 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+R  AQV  + IM +ADV +  EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENRTAAQVLWETIMGVADVDSS-EEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSS+VRLFLLPKSN PHTFVVVTLDPPIRKGQTLYPHIV+QFET+ VV+  L + 
Sbjct: 241 DFKIQYSSIVRLFLLPKSNNPHTFVVVTLDPPIRKGQTLYPHIVIQFETEAVVERNLALT 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
            E+   KYKD+LE SYKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 KEVLAEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRN 420
           +LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRN
Sbjct: 361 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 420

Query: 421 IQRNEYHNLFDFISGKGLKIMNLGDAQ-ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDE 480
           IQR+EYHNLF+FI+GK LKIMNLGD Q A  GV AVL++ DDDAVDPHLERI+N+AG +E
Sbjct: 421 IQRSEYHNLFNFINGKHLKIMNLGDGQGATGGVTAVLRDTDDDAVDPHLERIKNQAGDEE 480

Query: 481 SDEEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSR 540
           SDEED DFVADKDD GSPTDDSGG+DSD S SGGEKEK  KKEA    S+SK P K+K +
Sbjct: 481 SDEEDEDFVADKDDSGSPTDDSGGEDSDASESGGEKEKLSKKEA----SSSKPPVKRKPK 540

Query: 541 EGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWN 600
              ++GS K+K KKKKDPNAPKRA++ FM+FS  ER N+K +NP +  TE+ + LG+ W 
Sbjct: 541 GRDEEGSDKRKPKKKKDPNAPKRAMTPFMYFSMAERGNMKNNNPDLPTTEIAKKLGEMWQ 600

Query: 601 KMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDS---GNESD 641
           KM+ EEK+PY  +++ DKKRY++E + Y+    M++DS   GNESD
Sbjct: 601 KMTGEEKQPYIQQSQVDKKRYEKESAVYRGAAAMDVDSGSGGNESD 641

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot
Match: Q9LEF5 (FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1)

HSP 1 Score: 902.5 bits (2331), Expect = 2.7e-261
Identity = 457/644 (70.96%), Postives = 538/644 (83.54%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           M DG  +NNI LGGRGGTNPGQ K    G+ WK+QGGGK IE+DKAD+  VTWMKVPR+ 
Sbjct: 1   MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTAVTWMKVPRAY 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG+R+K GL+Y+FIGFR+QD+S+LT F Q N G+ P+EKQLSVSG+NWG +D++GNMLT
Sbjct: 61  QLGVRIKAGLFYRFIGFREQDVSNLTNFIQKNMGVTPDEKQLSVSGQNWGGIDIDGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           F+VGSKQAFEVSL DVAQTQ+QGK DV+LE HVDDTTGANEKDSLM++SFH+P +NTQFV
Sbjct: 121 FMVGSKQAFEVSLPDVAQTQMQGKTDVLLELHVDDTTGANEKDSLMDLSFHVPTSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPA +  + I+  ADV +  EE VVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAHILWETILKFADVGSS-EEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSS+VRLFLLPKSN PHTFVV+TLDPPIRKGQTLYPHIV+QFET+ VV+  L + 
Sbjct: 241 DFKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVERDLALS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
            EL   KYKD+LE SYKGLIHEVFT +LRGLSGAK+TRPG FRSCQDGYAVKSSLKAEDG
Sbjct: 301 KELLVEKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNM--HYFDLLIRLKTEQEHLFRN 420
           +LYPLEK FFFLPKPPTLILHEEI++VEFERH AGG+++  HYFDLL++LK +QEHLFRN
Sbjct: 361 LLYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRN 420

Query: 421 IQRNEYHNLFDFISGKGLKIMNL-GDAQARDGVAA-VLQEDDDDAVDPHLERIRNEAGGD 480
           IQRNEYHNLF+FI+GK +KIMNL GD Q   GV   VL++ DDDAVDPHLERI+N+AG +
Sbjct: 421 IQRNEYHNLFNFINGKNIKIMNLGGDGQGASGVVTDVLRDTDDDAVDPHLERIKNQAGDE 480

Query: 481 ESDEEDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKS 540
           ESDEED DFVADKDD GSPTDDSG ++SD S SGGEKEK  KKEA    S+SK   K+K 
Sbjct: 481 ESDEEDEDFVADKDDSGSPTDDSGDEESDASDSGGEKEKSSKKEA----SSSKPVQKRKH 540

Query: 541 REGADDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKW 600
           +   D+G +KKK KKKKDPNAPKRA++ FM+FS  ER N+K SNP +  TE+ + LG+ W
Sbjct: 541 KARDDEGQEKKKPKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMW 600

Query: 601 NKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESD 641
            KMS EEK+PY  +A+ DKKRY++E + Y+    +++DSGNESD
Sbjct: 601 QKMSGEEKQPYIQQAQVDKKRYEKESAVYRGEATVDVDSGNESD 639

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL
Match: A0A0A0LG27 (FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1)

HSP 1 Score: 1252.3 bits (3239), Expect = 0.0e+00
Identity = 642/642 (100.00%), Postives = 642/642 (100.00%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL
Match: A0A1S3B828 (FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1)

HSP 1 Score: 1245.7 bits (3222), Expect = 0.0e+00
Identity = 639/642 (99.53%), Postives = 640/642 (99.69%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDISSLTK+FQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNTQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL
Match: A0A6J1DKW2 (FACT complex subunit SSRP1 OS=Momordica charantia OX=3673 GN=LOC111021003 PE=3 SV=1)

HSP 1 Score: 1222.6 bits (3162), Expect = 0.0e+00
Identity = 623/642 (97.04%), Postives = 634/642 (98.75%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDK+DIV VTWMKVPR+N
Sbjct: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKSDIVSVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKFIGFRDQDI+SLTKFFQSNCGI PEEKQ+SVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFIGFRDQDITSLTKFFQSNCGIVPEEKQISVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+ PPAQVFRDKIMSMADV+AGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDENCPPAQVFRDKIMSMADVNAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKGLKIMNLGDA+ARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
Sbjct: 421 RNEYHNLFDFISGKGLKIMNLGDAKARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           ED DFV DKDDGGSPTDDSGGDDSD S SGGEKEKPGKKE KKDPSASKAPAKKKSR+GA
Sbjct: 481 EDEDFVLDKDDGGSPTDDSGGDDSDASESGGEKEKPGKKETKKDPSASKAPAKKKSRDGA 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           +DGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
Sbjct: 541 EDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYE+KARDDKKRYKEEISGYKNPQPMNIDSGNESDSA
Sbjct: 601 AEEKEPYEAKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL
Match: A0A6J1J6R0 (FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111482257 PE=3 SV=1)

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 624/642 (97.20%), Postives = 631/642 (98.29%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKA+E+DKADIVGVTWMKVPR+N
Sbjct: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG DESDE
Sbjct: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGD SDGS SGGEKEKPGKKEAKKDPSASK PAKKK +EG 
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL
Match: A0A6J1F4G5 (FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111442077 PE=3 SV=1)

HSP 1 Score: 1218.0 bits (3150), Expect = 0.0e+00
Identity = 624/642 (97.20%), Postives = 631/642 (98.29%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADGQLY+NISLGGRGGTNPGQLKTDQRGI WKKQGGGKA+E+DKADIVGVTWMKVPR+N
Sbjct: 1   MADGQLYSNISLGGRGGTNPGQLKTDQRGILWKKQGGGKAVELDKADIVGVTWMKVPRTN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLGIRVKDGLYYKF GFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
Sbjct: 61  QLGIRVKDGLYYKFTGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
Sbjct: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDES PPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
Sbjct: 181 GDESHPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETD+VVQSTLQIG
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDFVVQSTLQIG 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
Sbjct: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
Sbjct: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE 480
           RNEYHNLFDFISGKG+KIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAG DESDE
Sbjct: 421 RNEYHNLFDFISGKGMKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGVDESDE 480

Query: 481 EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA 540
           EDSDFVADKDDGGSPTDDSGGD SDGS SGGEKEKPGKKEAKKDPSASK PAKKK +EG 
Sbjct: 481 EDSDFVADKDDGGSPTDDSGGDHSDGSDSGGEKEKPGKKEAKKDPSASKPPAKKKLKEGT 540

Query: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS 600
           DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKS PGISFTELGRVLGDKWNKMS
Sbjct: 541 DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSTPGISFTELGRVLGDKWNKMS 600

Query: 601 AEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDSA 643
           AEEKEPYESKARDDKKRYKEEISGYKN QPMNIDSGNESDSA
Sbjct: 601 AEEKEPYESKARDDKKRYKEEISGYKNAQPMNIDSGNESDSA 642

[Close]

BLAST of CsaV3_3G041690 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 988.8 bits (2555), Expect = 2.1e-288
Identity = 512/646 (79.26%), Postives = 572/646 (88.54%), Query Frame = 0


Query: 1   MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN 60
           MADG  +NNISL GRGG NPG LK +  GIQWKKQGGGKA+EVD++DIV V+W KV +SN
Sbjct: 1   MADGHSFNNISLSGRGGKNPGLLKINSGGIQWKKQGGGKAVEVDRSDIVSVSWTKVTKSN 60

Query: 61  QLGIRVKDGLYYKFIGFRDQDISSLTKFFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT 120
           QLG++ KDGLYYKF+GFRDQD+ SL+ FFQS+ G  P+EKQLSVSGRNWGEVDL+GN LT
Sbjct: 61  QLGVKTKDGLYYKFVGFRDQDVPSLSSFFQSSYGKTPDEKQLSVSGRNWGEVDLHGNTLT 120

Query: 121 FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV 180
           FLVGSKQAFEVSLADV+QTQLQGKNDV LEFHVDDT GANEKDSLMEISFHIPN+NTQFV
Sbjct: 121 FLVGSKQAFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEISFHIPNSNTQFV 180

Query: 181 GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN 240
           GDE+RPP+QVF D I++MADVS G+E+AVVTFE IAILTPRGRY+VELHLSFLRLQGQAN
Sbjct: 181 GDENRPPSQVFNDTIVAMADVSPGVEDAVVTFESIAILTPRGRYNVELHLSFLRLQGQAN 240

Query: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG 300
           DFKIQYSSVVRLFLLPKSNQPHTFVV++LDPPIRKGQT+YPHIV+QFETD VV+S L I 
Sbjct: 241 DFKIQYSSVVRLFLLPKSNQPHTFVVISLDPPIRKGQTMYPHIVMQFETDTVVESELSIS 300

Query: 301 DELFNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG 360
           DEL NTK+KDKLE SYKGLIHEVFTT+LR LSGAKIT+PGKFRS QDG+AVKSSLKAEDG
Sbjct: 301 DELMNTKFKDKLERSYKGLIHEVFTTVLRWLSGAKITKPGKFRSSQDGFAVKSSLKAEDG 360

Query: 361 VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ 420
           VLYPLEK FFFLPKPPTLILH+EIDYVEFERHAAGG+NMHYFDLLIRLKT+ EHLFRNIQ
Sbjct: 361 VLYPLEKGFFFLPKPPTLILHDEIDYVEFERHAAGGANMHYFDLLIRLKTDHEHLFRNIQ 420

Query: 421 RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVL-QEDDDDAVDPHLERIRNEAGGDESD 480
           RNEYHNL+ FIS KGLKIMNLG A   DGVAAVL   DDDDAVDPHL RIRN+A  DESD
Sbjct: 421 RNEYHNLYTFISSKGLKIMNLGGAGTADGVAAVLGDNDDDDAVDPHLTRIRNQA-ADESD 480

Query: 481 EEDSDFV-ADKDDGGSPTDDSGGDDSDGSASG-GE-KEKPGKKEAKKDPSASKAPAKKKS 540
           EED DFV  + DDGGSPTDDSGGDDSD S  G GE KEK  KKE KK+ S+SK    K+ 
Sbjct: 481 EEDEDFVMGEDDDGGSPTDDSGGDDSDASEGGVGEIKEKSIKKEPKKEASSSKGLPPKRK 540

Query: 541 REGADDG-SKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDK 600
              AD+G SK+KK KKKKDPNAPKRA+SGFMFFS+MER+NIKK +PGI+F E+G+VLGDK
Sbjct: 541 TVAADEGSSKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDK 600

Query: 601 WNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESDS 642
           W +MSA++KEPYE+KA+ DK+RYK+EIS YKNPQPMN+DSGN+SDS
Sbjct: 601 WRQMSADDKEPYEAKAQVDKQRYKDEISDYKNPQPMNVDSGNDSDS 645

[Close]

BLAST of CsaV3_3G041690 vs. TAIR 10
Match: AT3G51880.1 (high mobility group B1 )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 507 SASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFM 566
           +A G +K K   KEA K     K   +K   E       +K++K KKDPN PKRA S F 
Sbjct: 3   TAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFF 62

Query: 567 FFSKMERENIKKSNPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGY 626
            F +  R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y
Sbjct: 63  VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 122

Query: 627 KNPQPMNIDSGNE 639
                 N++ G++
Sbjct: 123 NK----NLEEGSD 130

[Close]

BLAST of CsaV3_3G041690 vs. TAIR 10
Match: AT3G51880.2 (high mobility group B1 )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 507 SASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFM 566
           +A G +K K   KEA K     K   +K   E       +K++K KKDPN PKRA S F 
Sbjct: 3   TAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFF 62

Query: 567 FFSKMERENIKKSNPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGY 626
            F +  R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y
Sbjct: 63  VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 122

Query: 627 KNPQPMNIDSGNE 639
                 N++ G++
Sbjct: 123 NK----NLEEGSD 130

[Close]

BLAST of CsaV3_3G041690 vs. TAIR 10
Match: AT3G51880.3 (high mobility group B1 )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 507 SASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFM 566
           +A G +K K   KEA K     K   +K   E       +K++K KKDPN PKRA S F 
Sbjct: 3   TAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFF 62

Query: 567 FFSKMERENIKKSNPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGY 626
            F +  R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y
Sbjct: 63  VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 122

Query: 627 KNPQPMNIDSGNE 639
                 N++ G++
Sbjct: 123 NK----NLEEGSD 130

[Close]

BLAST of CsaV3_3G041690 vs. TAIR 10
Match: AT3G51880.4 (high mobility group B1 )

HSP 1 Score: 55.8 bits (133), Expect = 1.4e-07
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 507 SASGGEKEKPGKKEAKKDPSASKAPAKKKSREGADDGSKKKKQKKKKDPNAPKRAISGFM 566
           +A G +K K   KEA K     K   +K   E       +K++K KKDPN PKRA S F 
Sbjct: 3   TAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFF 62

Query: 567 FFSKMERENIKKSNPGI-SFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGY 626
            F +  R   KK NP + + + +G+  G KW  MS  EK PYE KA   K  Y++++  Y
Sbjct: 63  VFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAY 122

Query: 627 KNPQPMNIDSGNE 639
                 N++ G++
Sbjct: 123 NK----NLEEGSD 130

The following BLAST results are available for this feature:

BLAST of CsaV3_3G041690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147459.1	0.0e+00	100.00	FACT complex subunit SSRP1 [Cucumis sativus] >KGN59592.1 hypothetical protein Cs...	[more]
XP_008443431.1	0.0e+00	99.53	PREDICTED: FACT complex subunit SSRP1 [Cucumis melo]	[more]
XP_038905836.1	0.0e+00	98.75	FACT complex subunit SSRP1 [Benincasa hispida]	[more]
XP_022153521.1	0.0e+00	97.04	FACT complex subunit SSRP1 [Momordica charantia]	[more]
KAG6580976.1	0.0e+00	97.20	FACT complex subunit SSRP1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CsaV3_3G041690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04235	4.9e-303	81.96	FACT complex subunit SSRP1 OS=Vicia faba OX=3906 GN=SSRP1 PE=2 SV=1	[more]
Q39601	6.0e-293	81.00	FACT complex subunit SSRP1 OS=Catharanthus roseus OX=4058 GN=SSRP1 PE=2 SV=1	[more]
Q05153	2.9e-287	79.26	FACT complex subunit SSRP1 OS=Arabidopsis thaliana OX=3702 GN=SSRP1 PE=1 SV=2	[more]
Q9LGR0	4.2e-262	71.21	FACT complex subunit SSRP1-A OS=Oryza sativa subsp. japonica OX=39947 GN=SSRP1-A...	[more]
Q9LEF5	2.7e-261	70.96	FACT complex subunit SSRP1 OS=Zea mays OX=4577 GN=SSRP1 PE=1 SV=1	[more]

BLAST of CsaV3_3G041690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG27	0.0e+00	100.00	FACT complex subunit SSRP1 OS=Cucumis sativus OX=3659 GN=Csa_3G827340 PE=3 SV=1	[more]
A0A1S3B828	0.0e+00	99.53	FACT complex subunit SSRP1 OS=Cucumis melo OX=3656 GN=LOC103487021 PE=3 SV=1	[more]
A0A6J1DKW2	0.0e+00	97.04	FACT complex subunit SSRP1 OS=Momordica charantia OX=3673 GN=LOC111021003 PE=3 S...	[more]
A0A6J1J6R0	0.0e+00	97.20	FACT complex subunit SSRP1 OS=Cucurbita maxima OX=3661 GN=LOC111482257 PE=3 SV=1	[more]
A0A6J1F4G5	0.0e+00	97.20	FACT complex subunit SSRP1 OS=Cucurbita moschata OX=3662 GN=LOC111442077 PE=3 SV...	[more]

BLAST of CsaV3_3G041690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28730.1	2.1e-288	79.26	high mobility group	[more]
AT3G51880.1	1.4e-07	36.09	high mobility group B1	[more]
AT3G51880.2	1.4e-07	36.09	high mobility group B1	[more]
AT3G51880.3	1.4e-07	36.09	high mobility group B1	[more]
AT3G51880.4	1.4e-07	36.09	high mobility group B1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000969	Structure-specific recognition protein	PRINTS	PR00887	SSRCOGNITION	coord: 219..235 score: 64.71 coord: 264..280 score: 72.06 coord: 329..342 score: 60.71 coord: 356..374 score: 67.76 coord: 400..416 score: 56.62 coord: 374..391 score: 67.36 coord: 241..257 score: 73.53 coord: 416..434 score: 59.87
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 557..627 e-value: 2.4E-28 score: 110.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 558..626 e-value: 4.0E-22 score: 78.4
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 558..626 score: 20.265446
IPR013719	Domain of unknown function DUF1747	SMART	SM01287	Rtt106_2	coord: 348..441 e-value: 1.1E-34 score: 131.3
IPR013719	Domain of unknown function DUF1747	PFAM	PF08512	Rtt106	coord: 350..439 e-value: 5.6E-20 score: 71.5
IPR038167	SSRP1 domain superfamily	GENE3D	2.30.29.220		coord: 97..179 e-value: 4.2E-25 score: 89.4
None	No IPR available	GENE3D	2.30.29.150		coord: 199..338 e-value: 4.7E-56 score: 190.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 470..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 628..642
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 507..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..623
None	No IPR available	PANTHER	PTHR45849	FACT COMPLEX SUBUNIT SSRP1	coord: 1..640
None	No IPR available	PANTHER	PTHR45849:SF2	FACT COMPLEX SUBUNIT SSRP1-B	coord: 1..640
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 558..623 e-value: 1.83427E-26 score: 100.395
None	No IPR available	CDD	cd13230	PH1_SSRP1-like	coord: 207..340 e-value: 2.20057E-67 score: 214.701
None	No IPR available	CDD	cd13231	PH2_SSRP1-like	coord: 342..441 e-value: 3.04304E-45 score: 154.186
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 206..440
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 542..636 e-value: 2.2E-29 score: 103.7
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 544..627
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 339..448 e-value: 4.4E-34 score: 118.7
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 1..93 e-value: 1.4E-18 score: 68.9
IPR024954	SSRP1 domain	PFAM	PF03531	SSrecog	coord: 106..175 e-value: 4.4E-25 score: 87.5
IPR035417	FACT complex subunit POB3-like, N-terminal PH domain	PFAM	PF17292	POB3_N	coord: 7..98 e-value: 1.8E-21 score: 76.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G041690.1	CsaV3_3G041690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding